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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9C86 | 45298 | 2025-06-12 | 2024-06-12 | 2.9 | 3.44 | 2.99 | 3.3 | 0.004 | 0.59 | 0.0 | 0.04 | 16.83 | 0.00 | 1.947 | 43.20 | 4.30 | 4.8 | 95.2 | 0.1 | 0.38 | 0.64 | 0.73 | 2.64 | 3.3 | 0.005 | 0.86 | 1.0 | 0.04 | 16.93 | 0.00 | 1.287 | 45.40 | 3.90 | 7.1 | 92.9 | 0.0 | -0.28 | 0.25 | 0.62 | 0.73 | 2.70 | 14540 | 1942 | 5 | 0 | 0 | 0 | 44 | logfile |
✔ | 9C86 | 45298 | 2025-05-16 | 2024-06-12 | 2.9 | 3.44 | 2.99 | 3.3 | 0.004 | 0.59 | 0.0 | 0.04 | 16.83 | 0.00 | 1.947 | 43.20 | 4.30 | 4.8 | 95.2 | 0.1 | 0.38 | 0.64 | 0.73 | 2.64 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 16.94 | 0.00 | 1.413 | 42.06 | 4.44 | 6.6 | 93.4 | 0.0 | 0.03 | 0.24 | 0.61 | 0.71 | 2.51 | 14540 | 1942 | 5 | 0 | 0 | 0 | 44 | logfile |
✔ | 8ZW6 | 60517 | 2025-05-14 | 2024-06-12 | 2.75 | 2.23 | 2.81 | 2.0 | 0.003 | 0.63 | 0.0 | 0.05 | 15.48 | 0.00 | 2.165 | 2.11 | 0.00 | 1.9 | 98.1 | 0.0 | 0.79 | 0.84 | 0.82 | 4.02 | 2.0 | 0.004 | 0.58 | 0.0 | 0.04 | 16.13 | 0.00 | 2.496 | 2.07 | 1.82 | 2.0 | 98.0 | 0.0 | 0.77 | 0.98 | 0.84 | 0.86 | 3.89 | 11822 | 1447 | 15 | 0 | 30 | 0 | 0 | logfile |
✔ | 8ZW6 | 60517 | 2025-06-10 | 2024-06-12 | 2.75 | 2.23 | 2.81 | 2.0 | 0.003 | 0.63 | 0.0 | 0.05 | 15.48 | 0.00 | 2.165 | 2.11 | 0.00 | 1.9 | 98.1 | 0.0 | 0.79 | 0.84 | 0.82 | 4.02 | 2.0 | 0.003 | 0.55 | 0.0 | 0.04 | 16.11 | 0.00 | 2.462 | 2.37 | 2.05 | 2.0 | 98.0 | 0.0 | 0.77 | 0.98 | 0.84 | 0.86 | 3.89 | 11822 | 1447 | 15 | 0 | 30 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-11-14 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2025-04-26 | 2024-06-12 | 2.75 | 2.54 | 2.60 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.004 | 0.95 | 0.0 | 0.05 | 16.02 | 0.01 | 2.621 | 0.77 | 1.90 | 7.9 | 92.1 | 0.0 | -5.31 | 0.41 | 0.53 | 0.91 | 6.30 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-09-23 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-12-27 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2025-01-13 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.004 | 0.90 | 0.0 | 0.04 | 16.08 | 0.01 | 2.626 | 0.92 | 1.59 | 7.2 | 92.8 | 0.0 | -5.35 | 0.40 | 0.53 | 0.91 | 6.30 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2025-02-11 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.004 | 0.90 | 0.0 | 0.04 | 16.08 | 0.01 | 2.626 | 0.92 | 1.59 | 7.2 | 92.8 | 0.0 | -5.35 | 0.40 | 0.53 | 0.91 | 6.30 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2025-03-05 | 2024-06-12 | 2.75 | 2.54 | 2.60 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.004 | 0.95 | 0.0 | 0.05 | 16.02 | 0.01 | 2.621 | 0.77 | 1.90 | 7.9 | 92.1 | 0.0 | -5.31 | 0.41 | 0.53 | 0.91 | 6.30 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2025-06-04 | 2024-06-12 | 2.75 | 2.54 | 2.60 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.004 | 0.95 | 0.0 | 0.05 | 16.02 | 0.01 | 2.621 | 0.77 | 1.90 | 7.9 | 92.1 | 0.0 | -5.31 | 0.41 | 0.53 | 0.91 | 6.30 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-10-09 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2025-05-09 | 2024-06-12 | 2.75 | 2.54 | 2.60 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.004 | 0.90 | 0.0 | 0.04 | 16.08 | 0.01 | 2.626 | 0.92 | 1.59 | 7.2 | 92.8 | 0.0 | -5.35 | 0.40 | 0.53 | 0.91 | 6.30 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FNT | 50610 | 2025-06-05 | 2024-06-11 | 3.5 | 3.63 | 3.42 | 3.7 | 0.008 | 1.49 | 9.0 | 0.09 | 13.31 | 0.01 | 1.806 | 8.88 | 3.70 | 2.4 | 97.5 | 0.1 | -0.87 | 0.67 | 0.87 | 3.70 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 13.75 | 0.00 | 2.344 | 3.70 | 1.68 | 2.4 | 97.6 | 0.0 | -0.22 | 0.38 | 0.69 | 0.88 | 3.56 | 5535 | 735 | 8 | 0 | 2 | 0 | 0 | logfile |
✔ | 9C7T | 45292 | 2025-06-09 | 2024-06-11 | 2.7 | 3.36 | 2.77 | 3.2 | 0.005 | 0.54 | 0.0 | 0.04 | 12.31 | 0.00 | 1.425 | 4.01 | 0.00 | 2.7 | 97.3 | 0.1 | 0.68 | 0.84 | 0.89 | 3.99 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 14.05 | 0.00 | 1.947 | 3.40 | 0.93 | 2.1 | 97.9 | 0.0 | 1.00 | 0.30 | 0.84 | 0.90 | 3.26 | 10659 | 1333 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 8ZVQ | 60512 | 2025-06-07 | 2024-06-11 | 3.4 | 3.70 | 3.47 | 3.7 | 0.005 | 1.03 | 0.0 | 0.05 | 18.07 | 0.01 | 1.532 | 10.98 | 0.63 | 5.5 | 94.5 | 0.0 | -2.26 | 0.53 | 0.59 | 0.15 | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 18.49 | 0.00 | 2.504 | 12.51 | 5.45 | 6.2 | 93.8 | 0.0 | -0.70 | 1.18 | 0.52 | 0.61 | 0.30 | 8896 | 1152 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZVQ | 60512 | 2025-04-29 | 2024-06-11 | 3.4 | 3.70 | 3.47 | 3.7 | 0.005 | 1.03 | 0.0 | 0.05 | 18.07 | 0.01 | 1.532 | 10.98 | 0.63 | 5.5 | 94.5 | 0.0 | -2.26 | 0.53 | 0.59 | 0.15 | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 18.49 | 0.00 | 2.504 | 12.51 | 5.45 | 6.2 | 93.8 | 0.0 | -0.70 | 1.18 | 0.52 | 0.61 | 0.30 | 8896 | 1152 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZVQ | 60512 | 2025-05-12 | 2024-06-11 | 3.4 | 3.70 | 3.47 | 3.7 | 0.005 | 1.03 | 0.0 | 0.05 | 18.07 | 0.01 | 1.532 | 10.98 | 0.63 | 5.5 | 94.5 | 0.0 | -2.26 | 0.53 | 0.59 | 0.15 | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 18.48 | 0.00 | 2.531 | 11.78 | 4.40 | 5.3 | 94.7 | 0.0 | -0.51 | 1.18 | 0.52 | 0.60 | 0.43 | 8896 | 1152 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FNS | 50609 | 2025-06-05 | 2024-06-11 | 3.5 | 3.76 | 3.47 | 3.8 | 0.009 | 1.65 | 18.0 | 0.10 | 18.27 | 0.02 | 1.508 | 11.84 | 11.00 | 2.5 | 97.3 | 0.1 | -2.07 | 0.66 | 0.84 | 2.34 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 15.50 | 0.00 | 2.457 | 4.07 | 3.05 | 2.8 | 97.1 | 0.1 | -0.61 | 0.49 | 0.66 | 0.84 | 2.62 | 5542 | 727 | 8 | 0 | 2 | 0 | 0 | logfile |