Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9MS8	48568	2025-05-12	2025-01-09	3.73	4.13	3.84	4.0	0.003	0.75	0.0	0.04	16.24	0.00	2.522	7.79	1.12	8.0	92.0	0.0	-0.91	0.65	0.82	2.19	4.0	0.003	0.72	0.0	0.04	16.99	0.00	2.454	8.60	4.67	7.4	92.6	0.0	-0.07	0.96	0.65	0.81	1.87	9290	1189	3	0	0	0	0	logfile
✔	9MS8	48568	2025-04-30	2025-01-09	3.73	4.13	3.84	4.0	0.003	0.75	0.0	0.04	16.24	0.00	2.522	7.79	1.12	8.0	92.0	0.0	-0.91	0.65	0.82	2.19	4.0	0.003	0.75	0.0	0.04	17.09	0.00	2.428	9.57	4.06	7.6	92.4	0.0	-0.11	0.96	0.66	0.82	1.91	9290	1189	3	0	0	0	0	logfile
✔	9MS8	48568	2025-07-27	2025-01-09	3.73	4.13	3.84	4.0	0.003	0.75	0.0	0.04	16.24	0.00	2.522	7.79	1.12	8.0	92.0	0.0	-0.91	0.65	0.82	2.19	4.0	0.003	0.75	0.0	0.04	17.09	0.00	2.428	9.57	4.06	7.6	92.4	0.0	-0.11	0.96	0.66	0.82	1.91	9290	1189	3	0	0	0	0	logfile
✔	9MS8	48568	2025-06-08	2025-01-09	3.73	4.13	3.84	4.0	0.003	0.75	0.0	0.04	16.24	0.00	2.522	7.79	1.12	8.0	92.0	0.0	-0.91	0.65	0.82	2.19	4.0	0.003	0.75	0.0	0.04	17.09	0.00	2.428	9.57	4.06	7.6	92.4	0.0	-0.11	0.96	0.66	0.82	1.91	9290	1189	3	0	0	0	0	logfile
✔	9MSD	48575	2025-06-20	2025-01-09	3.2	3.50	3.26	3.5	0.005	0.92	0.0	0.05	13.63	0.02	2.298	0.69	0.57	5.1	94.9	0.0	-1.10	0.69	0.79	3.57	3.5	0.003	0.63	0.0	0.04	14.35	0.00	2.504	5.20	2.49	3.9	96.1	0.0	-0.44	0.45	0.75	0.85	3.27	24285	3036	27	0	48	0	0	logfile
✔	9MRK	48557	2025-05-19	2025-01-08	3.62	3.87	3.77	3.8	0.003	0.59	0.0	0.04	11.69	0.01	2.242	2.37	0.00	4.1	95.7	0.2	-1.34	0.68	0.78	2.52	3.8	0.004	0.66	0.0	0.04	15.48	0.00	2.370	4.63	2.76	3.2	96.7	0.1	1.14	2.36	0.69	0.80	1.86	18298	2350	12	0	0	0	0	logfile
✔	9MRN	48560	2025-05-19	2025-01-08	3.46	3.69	3.60	3.6	0.005	0.77	0.0	0.05	12.21	0.01	2.256	2.23	0.56	3.5	96.4	0.1	-0.30	0.71	0.84	2.54	3.6	0.005	0.63	0.0	0.04	15.20	0.00	2.574	4.22	3.17	3.4	96.4	0.1	1.67	2.08	0.72	0.86	1.74	18298	2350	12	0	0	0	0	logfile
✔	9MRK	48557	2025-06-16	2025-01-08	3.62	3.87	3.77	3.8	0.003	0.59	0.0	0.04	11.69	0.01	2.242	2.37	0.00	4.1	95.7	0.2	-1.34	0.68	0.78	2.52	3.8	0.003	0.66	0.0	0.04	15.49	0.00	2.367	4.39	3.17	3.4	96.6	0.1	1.01	2.36	0.71	0.80	1.83	18298	2350	12	0	0	0	0	logfile
✔	9MRN	48560	2025-06-16	2025-01-08	3.46	3.69	3.60	3.6	0.005	0.77	0.0	0.05	12.21	0.01	2.256	2.23	0.56	3.5	96.4	0.1	-0.30	0.71	0.84	2.54	3.6	0.006	0.71	0.0	0.04	15.26	0.00	2.503	4.63	3.38	4.1	95.8	0.1	1.32	2.08	0.72	0.86	1.83	18298	2350	12	0	0	0	0	logfile
✔	9MRM	48559	2025-05-19	2025-01-08	4.52	4.54	4.53	4.5	0.003	0.65	0.0	0.04	12.05	0.01	2.118	3.98	0.00	4.2	95.5	0.3	-0.82	0.68	0.74	—	4.4	0.003	0.68	0.0	0.04	13.14	0.00	2.376	8.06	0.00	3.5	96.3	0.3	0.76	1.74	0.69	0.76	—	18294	2350	12	0	0	0	0	logfile
✔	9MRM	48559	2025-06-16	2025-01-08	4.52	4.54	4.53	4.5	0.003	0.65	0.0	0.04	12.05	0.01	2.118	3.98	0.00	4.2	95.5	0.3	-0.82	0.68	0.74	—	4.5	0.003	0.68	0.0	0.04	13.06	0.00	2.378	8.28	0.00	3.7	96.0	0.3	0.75	1.74	0.69	0.76	—	18294	2350	12	0	0	0	0	logfile
✔	9MRL	48558	2025-05-19	2025-01-08	4.17	4.28	4.19	4.2	0.004	0.68	0.0	0.05	12.02	0.01	2.140	3.84	0.00	4.1	95.6	0.3	-0.71	0.58	0.69	—	4.2	0.003	0.66	0.0	0.04	13.18	0.00	2.490	6.10	0.00	3.6	96.3	0.2	0.64	0.94	0.59	0.70	—	18294	2350	12	0	0	0	0	logfile
✔	9MRL	48558	2025-06-16	2025-01-08	4.17	4.28	4.19	4.2	0.004	0.68	0.0	0.05	12.02	0.01	2.140	3.84	0.00	4.1	95.6	0.3	-0.71	0.58	0.69	—	4.2	0.003	0.64	0.0	0.04	13.22	0.00	2.482	6.16	0.00	3.0	96.8	0.2	0.66	0.94	0.60	0.71	—	18294	2350	12	0	0	0	0	logfile
✘	9MR7	48554	2025-05-14	2025-01-07	3.56	4.58	3.62	3.7	0.003	0.67	0.0	0.05	12.26	0.01	2.240	3.62	0.22	4.1	95.9	0.0	-0.83	0.79	0.76	2.52	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12463	1605	12	0	0	0	0	logfile
✔	9MR7	48554	2025-06-11	2025-01-07	3.56	4.58	3.62	3.7	0.003	0.67	0.0	0.05	12.26	0.01	2.240	3.62	0.22	4.1	95.9	0.0	-0.83	0.79	0.76	2.52	3.7	0.004	0.61	0.0	0.04	14.15	0.00	2.449	5.36	1.49	4.2	95.8	0.0	-0.13	1.69	0.86	0.83	2.04	12463	1605	12	0	0	0	0	logfile
✔	9MR7	48554	2025-07-30	2025-01-07	3.56	4.58	3.62	3.7	0.003	0.67	0.0	0.05	12.26	0.01	2.240	3.62	0.22	4.1	95.9	0.0	-0.83	0.79	0.76	2.52	3.7	0.004	0.61	0.0	0.04	14.15	0.00	2.449	5.36	1.49	4.2	95.8	0.0	-0.13	1.69	0.86	0.83	2.04	12463	1605	12	0	0	0	0	logfile
✔	9HXA	52458	2025-04-26	2025-01-07	3.7	3.04	3.74	3.4	0.006	0.81	0.0	0.06	10.52	0.00	2.589	0.00	0.00	6.7	93.3	0.0	-2.61	0.24	0.67	5.09	3.7	0.003	0.64	0.0	0.05	15.26	0.00	2.659	7.50	10.47	9.2	90.8	0.0	-2.21	0.83	0.24	0.67	4.86	848	124	2	0	0	0	0	logfile
✔	9HXA	52458	2025-03-05	2025-01-07	3.7	3.04	3.74	3.4	0.006	0.81	0.0	0.06	10.52	0.00	2.589	0.00	0.00	6.7	93.3	0.0	-2.61	0.24	0.67	5.09	3.7	0.003	0.64	0.0	0.05	15.26	0.00	2.659	7.50	10.47	9.2	90.8	0.0	-2.21	0.83	0.24	0.67	4.86	848	124	2	0	0	0	0	logfile
✔	9HXA	52458	2025-06-04	2025-01-07	3.7	3.04	3.74	3.4	0.006	0.81	0.0	0.06	10.52	0.00	2.589	0.00	0.00	6.7	93.3	0.0	-2.61	0.24	0.67	5.09	3.7	0.003	0.64	0.0	0.05	15.26	0.00	2.659	7.50	10.47	9.2	90.8	0.0	-2.21	0.83	0.24	0.67	4.86	848	124	2	0	0	0	0	logfile
✔	9HXA	52458	2025-07-23	2025-01-07	3.7	3.04	3.74	3.4	0.006	0.81	0.0	0.06	10.52	0.00	2.589	0.00	0.00	6.7	93.3	0.0	-2.61	0.24	0.67	5.09	3.7	0.003	0.64	0.0	0.05	15.26	0.00	2.659	7.50	10.47	9.2	90.8	0.0	-2.21	0.83	0.24	0.67	4.86	848	124	2	0	0	0	0	logfile

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