Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9GG1	51320	2025-02-10	2024-08-12	2.26	2.29	2.15	2.2	0.008	1.28	0.0	0.08	14.09	0.01	2.610	1.51	0.00	5.7	94.3	0.0	-2.57	0.45	0.92	7.85	2.2	0.004	0.73	0.0	0.05	15.81	0.00	2.534	2.72	0.81	3.1	96.0	1.0	-2.31	0.91	0.46	0.92	7.14	3232	428	4	0	0	0	0	logfile
✔	9GG0	51319	2025-03-05	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.57	0.0	0.05	15.98	0.00	2.578	2.04	1.47	1.9	98.1	0.0	-2.14	0.32	0.39	0.88	5.55	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2025-01-13	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.55	0.0	0.05	15.90	0.00	2.567	1.23	2.20	2.5	97.5	0.0	-2.13	0.33	0.39	0.88	5.78	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2025-02-10	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.55	0.0	0.05	15.90	0.00	2.567	1.23	2.20	2.5	97.5	0.0	-2.13	0.33	0.39	0.88	5.78	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2024-12-27	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2024-11-13	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2024-09-23	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✔	9GG0	51319	2024-10-09	2024-08-12	2.81	2.88	2.40	2.9	0.008	1.41	0.0	0.09	14.69	0.01	2.615	1.63	0.00	7.6	92.4	0.0	-2.42	0.42	0.90	5.63	2.9	0.004	0.58	0.0	0.05	15.92	0.00	2.577	2.45	1.47	2.2	97.8	0.0	-2.14	0.33	0.39	0.88	5.59	2385	321	3	0	0	0	0	logfile
✘	9J53	61141	2025-02-11	2024-08-11	3.3	3.55	3.36	3.6	0.003	0.57	0.0	0.04	14.75	0.00	2.117	11.26	4.13	8.6	91.4	0.0	-0.49	0.49	0.71	1.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6598	764	4	0	6	0	0	logfile
✘	9J53	61141	2025-03-11	2024-08-11	3.3	3.55	3.36	3.5	0.003	0.57	0.0	0.04	14.75	0.00	2.117	11.26	4.13	8.6	91.4	0.0	-0.49	0.49	0.71	1.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6598	764	4	0	6	0	0	logfile
✔	9J52	61140	2025-03-11	2024-08-11	3.1	3.36	3.18	3.4	0.004	0.55	0.0	0.04	12.86	0.00	2.100	10.21	2.36	6.5	93.4	0.1	0.50	0.54	0.77	2.63	3.4	0.004	0.63	0.0	0.04	15.09	0.00	2.513	10.66	1.92	5.4	94.6	0.0	1.35	1.14	0.54	0.77	2.14	6593	764	4	0	5	0	0	logfile
✔	9J52	61140	2025-02-11	2024-08-11	3.1	3.36	3.19	3.4	0.004	0.55	0.0	0.04	12.86	0.00	2.100	10.21	2.36	6.5	93.4	0.1	0.50	0.54	0.77	2.63	3.4	0.003	0.61	0.0	0.04	15.18	0.00	2.385	10.44	1.33	5.0	95.0	0.0	1.50	1.15	0.54	0.76	1.95	6593	764	4	0	5	0	0	logfile
✔	9J51	61139	2025-03-11	2024-08-11	3.1	3.34	3.14	3.4	0.003	0.55	0.0	0.04	14.55	0.00	2.092	9.85	2.66	5.2	94.8	0.0	0.40	0.53	0.75	2.04	3.4	0.003	0.62	0.0	0.04	16.04	0.00	2.430	9.93	3.10	5.3	94.7	0.0	0.66	1.13	0.53	0.76	2.02	6581	762	4	0	5	0	0	logfile
✔	9J51	61139	2025-02-11	2024-08-11	3.1	3.34	3.13	3.4	0.003	0.55	0.0	0.04	14.55	0.00	2.092	9.85	2.66	5.2	94.8	0.0	0.40	0.53	0.75	2.04	3.4	0.003	0.63	0.0	0.04	16.05	0.00	2.422	11.06	2.81	5.4	94.6	0.0	0.55	1.14	0.53	0.75	2.08	6581	762	4	0	5	0	0	logfile
✔	9J4X	61138	2024-12-27	2024-08-10	2.9	3.08	2.89	3.1	0.003	0.52	0.0	0.04	12.98	0.00	2.140	7.96	1.33	4.6	95.4	0.0	0.84	0.60	0.83	3.05	3.1	0.004	0.55	0.0	0.04	15.54	0.00	2.590	6.99	2.36	4.1	95.9	0.0	1.65	0.33	0.61	0.83	2.30	6588	764	4	0	4	0	0	logfile
✔	9J4X	61138	2025-02-11	2024-08-10	2.9	3.08	2.89	3.1	0.003	0.52	0.0	0.04	12.98	0.00	2.140	7.96	1.33	4.6	95.4	0.0	0.84	0.60	0.83	3.05	3.1	0.004	0.56	0.0	0.04	15.54	0.00	2.590	7.36	1.47	4.4	95.6	0.0	1.55	0.33	0.61	0.83	2.20	6588	764	4	0	4	0	0	logfile
✔	9J4X	61138	2025-03-11	2024-08-10	2.9	3.08	2.90	3.1	0.003	0.52	0.0	0.04	12.98	0.00	2.140	7.96	1.33	4.6	95.4	0.0	0.84	0.60	0.83	3.05	3.1	0.003	0.54	0.0	0.04	15.52	0.00	2.591	6.99	1.77	4.4	95.6	0.0	1.59	0.32	0.61	0.83	2.31	6588	764	4	0	4	0	0	logfile
✔	9J4X	61138	2025-01-14	2024-08-10	2.9	3.08	2.89	3.1	0.003	0.52	0.0	0.04	12.98	0.00	2.140	7.96	1.33	4.6	95.4	0.0	0.84	0.60	0.83	3.05	3.1	0.004	0.56	0.0	0.04	15.54	0.00	2.590	7.36	1.47	4.4	95.6	0.0	1.55	0.33	0.61	0.83	2.20	6588	764	4	0	4	0	0	logfile
✔	9D3D	46532	2025-01-21	2024-08-09	3.41	3.73	3.55	3.7	0.003	0.58	0.0	0.04	10.40	0.00	1.972	4.07	1.04	3.0	97.0	0.0	-1.46	0.73	0.85	3.48	3.7	0.006	0.77	0.0	0.05	13.23	0.00	2.431	5.25	2.71	5.0	95.0	0.0	-0.76	0.47	0.74	0.87	2.79	17243	1973	50	0	130	0	0	logfile
✔	9D32	46512	2025-03-11	2024-08-09	3.1	3.43	3.09	3.5	0.004	0.59	0.0	0.04	11.07	0.00	2.012	4.59	3.02	2.1	97.9	0.0	0.80	0.67	0.80	4.48	3.5	0.003	0.53	0.0	0.04	13.70	0.00	2.098	4.16	2.67	1.9	98.1	0.0	1.17	0.36	0.66	0.80	3.60	6130	778	5	0	11	0	0	logfile

• ← previous
• Page 18 of 5115
• next →