Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9LBS	62955	2025-05-13	2025-01-03	3.41	2.53	3.40	2.2	0.004	0.77	0.0	0.05	17.05	0.01	2.215	8.06	0.69	12.1	87.5	0.5	-3.57	0.68	0.70	1.51	2.2	0.003	0.69	0.0	0.04	17.22	0.00	2.496	7.91	3.74	11.8	88.0	0.1	-3.14	0.32	0.70	0.73	1.33	6730	867	8	0	3	0	0	logfile
✔	9MQH	48524	2025-06-04	2025-01-03	3.9	4.08	3.69	4.0	0.003	0.59	0.0	0.04	15.16	0.00	2.206	4.68	3.92	3.2	96.8	0.0	1.41	0.55	0.80	1.35	4.0	0.003	0.56	0.0	0.04	16.02	0.00	2.638	4.44	5.39	2.9	97.1	0.0	2.34	0.36	0.54	0.79	0.74	2074	281	1	0	0	0	0	logfile
✔	9LBS	62955	2025-07-27	2025-01-03	3.41	2.53	3.40	2.2	0.004	0.77	0.0	0.05	17.05	0.01	2.215	8.06	0.69	12.1	87.5	0.5	-3.57	0.68	0.70	1.51	2.2	0.003	0.68	0.0	0.04	17.21	0.00	2.494	7.38	4.29	12.0	87.9	0.1	-3.11	0.31	0.70	0.73	1.45	6730	867	8	0	3	0	0	logfile
✔	9LBS	62955	2025-06-08	2025-01-03	3.41	2.53	3.40	2.2	0.004	0.77	0.0	0.05	17.05	0.01	2.215	8.06	0.69	12.1	87.5	0.5	-3.57	0.68	0.70	1.51	2.2	0.003	0.68	0.0	0.04	17.21	0.00	2.494	7.38	4.29	12.0	87.9	0.1	-3.11	0.31	0.70	0.73	1.45	6730	867	8	0	3	0	0	logfile
✔	9LBS	62955	2025-04-30	2025-01-03	3.41	2.53	3.40	2.2	0.004	0.77	0.0	0.05	17.05	0.01	2.215	8.06	0.69	12.1	87.5	0.5	-3.57	0.68	0.70	1.51	2.2	0.003	0.68	0.0	0.04	17.21	0.00	2.494	7.38	4.29	12.0	87.9	0.1	-3.11	0.31	0.70	0.73	1.45	6730	867	8	0	3	0	0	logfile
✔	9HVW	52444	2025-05-12	2025-01-02	3.1	3.42	3.15	3.4	0.004	0.82	0.0	0.05	16.16	0.01	2.573	6.17	1.53	4.7	95.3	0.0	-2.70	0.56	0.61	0.92	3.3	0.006	0.71	0.0	0.05	17.14	0.00	2.515	13.80	4.69	7.3	92.7	0.0	-1.91	1.12	0.64	0.76	2.33	8950	1149	8	0	0	0	0	logfile
✔	9HVW	52444	2025-04-29	2025-01-02	3.1	3.42	3.15	3.4	0.004	0.82	0.0	0.05	16.16	0.01	2.573	6.17	1.53	4.7	95.3	0.0	-2.70	0.56	0.61	0.92	3.4	0.004	0.62	0.0	0.04	17.17	0.00	2.520	12.01	4.31	5.0	95.0	0.0	-1.78	1.12	0.64	0.75	2.14	8950	1149	8	0	0	0	0	logfile
✔	9HVW	52444	2025-03-13	2025-01-02	3.1	3.42	3.15	3.4	0.004	0.82	0.0	0.05	16.16	0.01	2.573	6.17	1.53	4.7	95.3	0.0	-2.70	0.56	0.61	0.92	3.4	0.004	0.63	0.0	0.04	17.18	0.00	2.521	12.29	4.60	5.9	94.1	0.0	-1.77	1.12	0.65	0.76	2.25	8950	1149	8	0	0	0	0	logfile
✔	9HVW	52444	2025-06-07	2025-01-02	3.1	3.42	3.15	3.4	0.004	0.82	0.0	0.05	16.16	0.01	2.573	6.17	1.53	4.7	95.3	0.0	-2.70	0.56	0.61	0.92	3.4	0.004	0.62	0.0	0.04	17.17	0.00	2.520	12.01	4.31	5.0	95.0	0.0	-1.78	1.12	0.64	0.75	2.14	8950	1149	8	0	0	0	0	logfile
✔	9HVW	52444	2025-07-27	2025-01-02	3.1	3.42	3.15	3.4	0.004	0.82	0.0	0.05	16.16	0.01	2.573	6.17	1.53	4.7	95.3	0.0	-2.70	0.56	0.61	0.92	3.4	0.004	0.62	0.0	0.04	17.17	0.00	2.520	12.01	4.31	5.0	95.0	0.0	-1.78	1.12	0.64	0.75	2.14	8950	1149	8	0	0	0	0	logfile
✔	9LAE	62925	2025-03-06	2025-01-02	3.46	3.62	3.40	3.6	0.006	0.73	0.0	0.05	13.67	0.00	2.120	8.61	0.00	8.0	91.8	0.2	-3.66	0.52	0.71	3.84	3.6	0.006	0.71	0.0	0.05	16.47	0.00	2.518	9.43	3.84	7.6	92.4	0.0	-1.80	0.90	0.71	0.88	3.63	5000	645	6	0	1	0	0	logfile
✔	9MQ6	48514	2025-05-13	2025-01-02	3.3	3.80	3.20	3.6	0.003	0.47	0.0	0.04	10.60	0.00	2.234	4.50	0.48	4.9	95.1	0.0	0.81	0.62	0.88	1.91	3.6	0.004	0.63	0.0	0.04	14.24	0.00	2.437	5.31	1.33	5.4	94.6	0.0	1.29	1.05	0.62	0.89	1.64	9917	1252	5	0	4	0	0	logfile
✔	9LAE	62925	2025-07-24	2025-01-02	3.46	3.62	3.40	3.6	0.006	0.75	0.0	0.05	13.67	0.00	2.120	8.61	0.00	8.0	91.8	0.2	-3.66	0.52	0.71	3.84	3.6	0.005	1.46	2.0	0.05	16.38	0.00	2.074	9.12	3.47	7.4	92.6	0.0	-1.63	0.42	0.71	0.88	3.53	5000	645	6	0	1	0	0	logfile
✔	9LAE	62925	2025-05-10	2025-01-02	3.46	3.62	3.40	3.6	0.006	0.75	0.0	0.05	13.67	0.00	2.120	8.61	0.00	8.0	91.8	0.2	-3.66	0.52	0.71	3.84	3.6	0.003	0.65	0.0	0.04	16.38	0.00	2.500	7.89	2.74	6.6	93.4	0.0	-1.58	0.92	0.71	0.87	3.58	5000	645	6	0	1	0	0	logfile
✔	9LAE	62925	2025-04-27	2025-01-02	3.46	3.62	3.40	3.6	0.006	0.75	0.0	0.05	13.67	0.00	2.120	8.61	0.00	8.0	91.8	0.2	-3.66	0.52	0.71	3.84	3.6	0.005	1.46	2.0	0.05	16.38	0.00	2.074	9.12	3.47	7.4	92.6	0.0	-1.63	0.42	0.71	0.88	3.53	5000	645	6	0	1	0	0	logfile
✔	9MQ6	48514	2025-07-28	2025-01-02	3.3	3.80	3.20	3.6	0.003	0.47	0.0	0.04	10.60	0.00	2.234	4.50	0.48	4.9	95.1	0.0	0.81	0.62	0.88	1.91	3.6	0.004	0.67	0.0	0.04	14.28	0.00	2.435	5.82	1.14	5.6	94.4	0.0	1.27	1.05	0.62	0.89	1.76	9917	1252	5	0	4	0	0	logfile
✔	9MQ6	48514	2025-06-08	2025-01-02	3.3	3.80	3.20	3.6	0.003	0.47	0.0	0.04	10.60	0.00	2.234	4.50	0.48	4.9	95.1	0.0	0.81	0.62	0.88	1.91	3.6	0.004	0.67	0.0	0.04	14.28	0.00	2.435	5.82	1.14	5.6	94.4	0.0	1.27	1.05	0.62	0.89	1.76	9917	1252	5	0	4	0	0	logfile
✔	9MQ6	48514	2025-04-30	2025-01-02	3.3	3.80	3.20	3.6	0.003	0.47	0.0	0.04	10.60	0.00	2.234	4.50	0.48	4.9	95.1	0.0	0.81	0.62	0.88	1.91	3.6	0.004	0.67	0.0	0.04	14.28	0.00	2.435	5.82	1.14	5.6	94.4	0.0	1.27	1.05	0.62	0.89	1.76	9917	1252	5	0	4	0	0	logfile
✔	9LAE	62925	2025-06-05	2025-01-02	3.46	3.62	3.40	3.6	0.006	0.75	0.0	0.05	13.67	0.00	2.120	8.61	0.00	8.0	91.8	0.2	-3.66	0.52	0.71	3.84	3.6	0.005	1.46	2.0	0.05	16.38	0.00	2.074	9.12	3.47	7.4	92.6	0.0	-1.63	0.42	0.71	0.88	3.53	5000	645	6	0	1	0	0	logfile
✔	9LA7	62921	2025-07-28	2025-01-01	2.39	2.73	2.56	2.8	0.005	0.75	0.0	0.05	17.57	0.01	2.227	9.51	3.74	2.6	97.4	0.0	1.11	0.60	0.86	3.25	2.8	0.003	0.54	0.0	0.04	17.97	0.00	2.495	6.61	4.65	2.9	97.1	0.0	2.39	0.90	0.56	0.85	3.26	10340	1220	4	0	0	0	0	logfile

• ← previous
• Page 19 of 5055
• next →