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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8Z0P | 39710 | 2025-05-12 | 2024-04-10 | 3.1 | 3.23 | 3.20 | 3.3 | 0.010 | 0.68 | 0.0 | 0.04 | 15.66 | 0.00 | 1.926 | 7.25 | 1.17 | 7.5 | 91.8 | 0.7 | -1.15 | 0.58 | 0.73 | 2.06 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 16.44 | 0.00 | 1.936 | 5.30 | 2.54 | 9.6 | 89.5 | 0.9 | -1.68 | 1.06 | 0.60 | 0.76 | 1.85 | 9246 | 586 | 2 | 0 | 3 | 0 | 4627 | logfile |
✔ | 8Z0P | 39710 | 2025-01-16 | 2024-04-10 | 3.1 | 3.23 | 3.22 | 3.3 | 0.003 | 0.68 | 0.0 | 0.04 | 15.66 | 0.00 | 1.926 | 7.25 | 1.17 | 7.5 | 91.8 | 0.7 | -1.15 | 0.58 | 0.73 | 2.06 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 16.41 | 0.00 | 1.921 | 4.87 | 1.95 | 8.7 | 90.4 | 0.9 | -1.60 | 1.06 | 0.61 | 0.76 | 1.72 | 9246 | 586 | 2 | 0 | 3 | 0 | 4627 | logfile |
✔ | 8Z0P | 39710 | 2025-03-13 | 2024-04-10 | 3.1 | 3.23 | 3.20 | 3.3 | 0.003 | 0.68 | 0.0 | 0.04 | 15.66 | 0.00 | 1.926 | 7.25 | 1.17 | 7.5 | 91.8 | 0.7 | -1.15 | 0.58 | 0.73 | 2.06 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 16.42 | 0.00 | 1.913 | 5.30 | 1.95 | 9.1 | 90.0 | 0.9 | -1.60 | 1.05 | 0.60 | 0.76 | 1.81 | 9246 | 586 | 2 | 0 | 3 | 0 | 4627 | logfile |
✔ | 8Z0R | 39713 | 2025-05-15 | 2024-04-10 | 2.53 | 2.71 | 2.56 | 2.8 | 0.002 | 0.47 | 0.0 | 0.04 | 13.22 | 0.00 | 2.210 | 4.60 | 0.00 | 3.6 | 96.3 | 0.1 | 0.72 | 0.69 | 0.84 | 3.32 | 2.8 | 0.004 | 0.60 | 0.0 | 0.04 | 15.74 | 0.01 | 2.525 | 3.65 | 1.84 | 3.7 | 96.2 | 0.1 | 0.88 | 0.89 | 0.64 | 0.84 | 3.12 | 13717 | 1766 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Z0Q | 39711 | 2025-05-10 | 2024-04-10 | 2.6 | 2.77 | 2.61 | 2.8 | 0.002 | 0.49 | 0.0 | 0.04 | 13.18 | 0.00 | 2.194 | 6.89 | 0.00 | 3.0 | 96.9 | 0.1 | 0.58 | 0.61 | 0.71 | 2.60 | 2.8 | 0.002 | 0.54 | 0.0 | 0.04 | 15.82 | 0.00 | 2.613 | 5.57 | 1.27 | 3.5 | 96.3 | 0.1 | 0.90 | 0.39 | 0.60 | 0.72 | 2.30 | 6881 | 884 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Z0Q | 39711 | 2025-04-28 | 2024-04-10 | 2.6 | 2.77 | 2.61 | 2.8 | 0.002 | 0.49 | 0.0 | 0.04 | 13.18 | 0.00 | 2.194 | 6.89 | 0.00 | 3.0 | 96.9 | 0.1 | 0.58 | 0.61 | 0.71 | 2.60 | 2.8 | 0.003 | 0.55 | 0.0 | 0.04 | 15.91 | 0.00 | 2.603 | 5.79 | 1.83 | 3.4 | 96.5 | 0.1 | 0.90 | 0.40 | 0.60 | 0.72 | 2.11 | 6881 | 884 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2024-12-27 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.79 | 0.00 | 2.447 | 8.62 | 5.45 | 7.2 | 92.8 | 0.0 | -0.52 | 0.32 | 0.72 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2025-01-14 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.8 | 0.003 | 0.63 | 0.0 | 0.05 | 16.78 | 0.00 | 2.471 | 8.08 | 4.76 | 6.5 | 93.5 | 0.0 | -0.41 | 0.36 | 0.73 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2025-02-11 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.8 | 0.003 | 0.63 | 0.0 | 0.05 | 16.78 | 0.00 | 2.471 | 8.08 | 4.76 | 6.5 | 93.5 | 0.0 | -0.41 | 0.36 | 0.73 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2025-05-10 | 2024-04-10 | 3.58 | 3.81 | 3.60 | 3.8 | 0.005 | 1.02 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.004 | 0.69 | 0.0 | 0.05 | 16.83 | 0.00 | 2.435 | 9.63 | 5.31 | 7.0 | 93.0 | 0.0 | -0.59 | 0.35 | 0.73 | 0.80 | 1.77 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2024-09-24 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.79 | 0.00 | 2.447 | 8.62 | 5.45 | 7.2 | 92.8 | 0.0 | -0.52 | 0.32 | 0.72 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2024-10-10 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.79 | 0.00 | 2.447 | 8.62 | 5.45 | 7.2 | 92.8 | 0.0 | -0.52 | 0.32 | 0.72 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2025-03-11 | 2024-04-10 | 3.58 | 3.81 | 3.60 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.004 | 0.67 | 0.0 | 0.05 | 16.75 | 0.00 | 2.427 | 10.17 | 5.31 | 7.9 | 92.1 | 0.0 | -0.54 | 0.34 | 0.73 | 0.80 | 1.97 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2025-04-27 | 2024-04-10 | 3.58 | 3.81 | 3.60 | 3.8 | 0.005 | 1.02 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.003 | 0.69 | 0.0 | 0.05 | 16.73 | 0.00 | 2.443 | 9.40 | 5.45 | 7.0 | 93.0 | 0.0 | -0.49 | 0.36 | 0.73 | 0.80 | 1.84 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2024-11-14 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.79 | 0.00 | 2.447 | 8.62 | 5.45 | 7.2 | 92.8 | 0.0 | -0.52 | 0.32 | 0.72 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 8Z0T | 39033 | 2024-08-03 | 2024-04-10 | 3.58 | 3.81 | 3.61 | 3.8 | 0.005 | 0.98 | 1.0 | 0.06 | 19.03 | 0.01 | 2.259 | 6.37 | 0.98 | 6.4 | 93.6 | 0.0 | -1.26 | 0.72 | 0.79 | 1.79 | 3.7 | 0.003 | 0.65 | 0.0 | 0.05 | 16.79 | 0.00 | 2.447 | 8.62 | 5.45 | 7.2 | 92.8 | 0.0 | -0.52 | 0.32 | 0.72 | 0.79 | 1.82 | 6556 | 802 | 9 | 0 | 17 | 0 | 0 | logfile |
✔ | 9EYJ | 50055 | 2025-04-27 | 2024-04-09 | 2.97 | 3.34 | 2.93 | 3.2 | 0.004 | 0.59 | 1.0 | 0.04 | 16.13 | 0.00 | 1.569 | 13.32 | 2.14 | 4.8 | 95.2 | 0.0 | -0.70 | 0.70 | 0.72 | 2.62 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.35 | 0.00 | 2.529 | 9.28 | 2.94 | 4.5 | 95.5 | 0.0 | -0.24 | 0.42 | 0.70 | 0.71 | 2.77 | 4334 | 576 | 3 | 4 | 0 | 0 | 0 | logfile |
✔ | 9EYJ | 50055 | 2025-02-11 | 2024-04-09 | 2.97 | 3.34 | 2.92 | 3.2 | 0.004 | 0.59 | 1.0 | 0.04 | 16.13 | 0.00 | 1.569 | 13.32 | 2.14 | 4.8 | 95.2 | 0.0 | -0.70 | 0.70 | 0.72 | 2.62 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 16.46 | 0.00 | 2.575 | 11.48 | 3.48 | 4.8 | 95.2 | 0.0 | -0.54 | 0.39 | 0.70 | 0.72 | 2.77 | 4334 | 576 | 3 | 4 | 0 | 0 | 0 | logfile |
✔ | 9EYJ | 50055 | 2025-01-13 | 2024-04-09 | 2.97 | 3.34 | 2.92 | 3.2 | 0.004 | 0.59 | 1.0 | 0.04 | 16.13 | 0.00 | 1.569 | 13.32 | 2.14 | 4.8 | 95.2 | 0.0 | -0.70 | 0.70 | 0.72 | 2.62 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 16.46 | 0.00 | 2.575 | 11.48 | 3.48 | 4.8 | 95.2 | 0.0 | -0.54 | 0.39 | 0.70 | 0.72 | 2.77 | 4334 | 576 | 3 | 4 | 0 | 0 | 0 | logfile |
✔ | 9BCN | 44431 | 2025-01-14 | 2024-04-09 | 2.9 | 3.16 | 2.99 | 3.2 | 0.006 | 0.81 | 2.0 | 0.06 | 15.34 | 0.01 | 2.156 | 3.80 | 0.96 | 3.7 | 96.3 | 0.0 | -0.99 | 0.72 | 0.85 | 4.67 | 3.2 | 0.002 | 0.64 | 0.0 | 0.04 | 15.76 | 0.00 | 2.570 | 3.03 | 1.28 | 1.9 | 98.1 | 0.0 | 0.76 | 1.14 | 0.68 | 0.83 | 3.62 | 6606 | 850 | 8 | 0 | 16 | 0 | 0 | logfile |