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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8ZWM | 60533 | 2024-12-27 | 2024-06-13 | 3.2 | 3.28 | 2.96 | 3.3 | 0.005 | 0.67 | 0.0 | 0.05 | 11.92 | 0.00 | 2.167 | 4.43 | 0.00 | 2.3 | 97.7 | 0.0 | -3.69 | 0.35 | 0.90 | 6.45 | 3.3 | 0.004 | 0.58 | 0.0 | 0.05 | 14.40 | 0.00 | 2.606 | 3.43 | 1.02 | 2.5 | 97.5 | 0.0 | -2.56 | 1.26 | 0.33 | 0.91 | 6.49 | 3435 | 453 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWL | 60532 | 2024-11-14 | 2024-06-13 | 3.4 | 3.16 | 3.10 | 3.5 | 0.008 | 0.92 | 0.0 | 0.06 | 11.35 | 0.00 | 2.273 | 8.06 | 0.00 | 5.4 | 94.6 | 0.0 | -4.31 | 0.30 | 0.81 | 4.89 | 3.4 | 0.006 | 0.75 | 0.0 | 0.05 | 13.97 | 0.00 | 2.607 | 5.80 | 2.53 | 6.3 | 93.7 | 0.0 | -3.25 | 0.57 | 0.33 | 0.85 | 4.75 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWL | 60532 | 2024-12-27 | 2024-06-13 | 3.4 | 3.16 | 3.10 | 3.5 | 0.008 | 0.92 | 0.0 | 0.06 | 11.35 | 0.00 | 2.273 | 8.06 | 0.00 | 5.4 | 94.6 | 0.0 | -4.31 | 0.30 | 0.81 | 4.89 | 3.4 | 0.006 | 0.75 | 0.0 | 0.05 | 13.97 | 0.00 | 2.607 | 5.80 | 2.53 | 6.3 | 93.7 | 0.0 | -3.25 | 0.57 | 0.33 | 0.85 | 4.75 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWH | 60527 | 2024-09-23 | 2024-06-13 | 2.5 | 3.26 | — | 3.0 | 0.011 | 0.91 | 0.0 | 0.06 | 9.45 | 0.00 | 2.284 | 18.21 | 0.00 | 3.8 | 96.2 | 0.0 | -4.12 | 0.42 | 0.85 | 2.37 | 3.0 | 0.002 | 0.54 | 0.0 | 0.05 | 11.67 | 0.00 | 2.575 | 6.43 | 0.88 | 5.0 | 95.0 | 0.0 | -3.11 | 1.18 | 0.43 | 0.84 | 3.55 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWH | 60527 | 2024-10-09 | 2024-06-13 | 2.5 | 3.26 | — | 3.0 | 0.011 | 0.91 | 0.0 | 0.06 | 9.45 | 0.00 | 2.284 | 18.21 | 0.00 | 3.8 | 96.2 | 0.0 | -4.12 | 0.42 | 0.85 | 2.37 | 3.0 | 0.002 | 0.54 | 0.0 | 0.05 | 11.67 | 0.00 | 2.575 | 6.43 | 0.88 | 5.0 | 95.0 | 0.0 | -3.11 | 1.18 | 0.43 | 0.84 | 3.55 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWH | 60527 | 2024-11-13 | 2024-06-13 | 2.5 | 3.26 | — | 3.0 | 0.011 | 0.91 | 0.0 | 0.06 | 9.45 | 0.00 | 2.284 | 18.21 | 0.00 | 3.8 | 96.2 | 0.0 | -4.12 | 0.42 | 0.85 | 2.37 | 3.0 | 0.002 | 0.54 | 0.0 | 0.05 | 11.67 | 0.00 | 2.575 | 6.43 | 0.88 | 5.0 | 95.0 | 0.0 | -3.11 | 1.18 | 0.43 | 0.84 | 3.55 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWH | 60527 | 2024-12-27 | 2024-06-13 | 2.5 | 3.26 | — | 3.0 | 0.011 | 0.91 | 0.0 | 0.06 | 9.45 | 0.00 | 2.284 | 18.21 | 0.00 | 3.8 | 96.2 | 0.0 | -4.12 | 0.42 | 0.85 | 2.37 | 3.0 | 0.002 | 0.54 | 0.0 | 0.05 | 11.67 | 0.00 | 2.575 | 6.43 | 0.88 | 5.0 | 95.0 | 0.0 | -3.11 | 1.18 | 0.43 | 0.84 | 3.55 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWM | 60533 | 2024-09-23 | 2024-06-13 | 3.2 | 3.28 | 2.96 | 3.3 | 0.005 | 0.67 | 0.0 | 0.05 | 11.92 | 0.00 | 2.167 | 4.43 | 0.00 | 2.3 | 97.7 | 0.0 | -3.69 | 0.35 | 0.90 | 6.45 | 3.3 | 0.004 | 0.58 | 0.0 | 0.05 | 14.40 | 0.00 | 2.606 | 3.43 | 1.02 | 2.5 | 97.5 | 0.0 | -2.56 | 1.26 | 0.33 | 0.91 | 6.49 | 3435 | 453 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZWL | 60532 | 2024-10-09 | 2024-06-13 | 3.4 | 3.16 | 3.10 | 3.5 | 0.008 | 0.92 | 0.0 | 0.06 | 11.35 | 0.00 | 2.273 | 8.06 | 0.00 | 5.4 | 94.6 | 0.0 | -4.31 | 0.30 | 0.81 | 4.89 | 3.4 | 0.006 | 0.75 | 0.0 | 0.05 | 13.97 | 0.00 | 2.607 | 5.80 | 2.53 | 6.3 | 93.7 | 0.0 | -3.25 | 0.57 | 0.33 | 0.85 | 4.75 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-11-14 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-10-09 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-12-27 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-08-02 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.84 | 0.0 | 0.04 | 15.89 | 0.00 | 2.632 | 1.38 | 1.59 | 6.6 | 93.4 | 0.0 | -5.29 | 0.38 | 0.53 | 0.91 | 6.21 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoR | 50628 | 2024-09-23 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C86 | 45298 | 2024-12-31 | 2024-06-12 | 2.9 | 3.44 | 3.01 | 3.3 | 0.004 | 0.59 | 0.0 | 0.04 | 16.83 | 0.00 | 1.947 | 43.20 | 4.30 | 4.8 | 95.2 | 0.1 | 0.38 | 0.64 | 0.73 | 2.64 | 3.3 | 0.005 | 0.87 | 1.0 | 0.05 | 16.96 | 0.00 | 1.333 | 47.34 | 4.70 | 7.7 | 92.3 | 0.0 | -0.71 | 0.26 | 0.63 | 0.73 | 2.82 | 14540 | 1942 | 5 | 0 | 0 | 0 | 44 | logfile |
✔ | 9C8R | 45308 | 2024-12-30 | 2024-06-12 | 2.83 | 3.00 | 2.86 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.12 | 0.00 | 2.220 | 3.55 | 0.95 | 2.4 | 97.6 | 0.0 | -0.07 | 0.70 | 0.90 | 4.57 | 3.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.51 | 0.00 | 1.653 | 2.71 | 1.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.23 | 0.73 | 0.91 | 4.23 | 12220 | 1544 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C8R | 45308 | 2024-08-05 | 2024-06-12 | 2.83 | 3.00 | 2.86 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.12 | 0.00 | 2.220 | 3.55 | 0.95 | 2.4 | 97.6 | 0.0 | -0.07 | 0.70 | 0.90 | 4.57 | 3.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.51 | 0.00 | 1.653 | 2.71 | 1.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.23 | 0.73 | 0.91 | 4.23 | 12220 | 1544 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C8R | 45308 | 2024-09-26 | 2024-06-12 | 2.83 | 3.00 | 2.86 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.12 | 0.00 | 2.220 | 3.55 | 0.95 | 2.4 | 97.6 | 0.0 | -0.07 | 0.70 | 0.90 | 4.57 | 3.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.51 | 0.00 | 1.653 | 2.71 | 1.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.23 | 0.73 | 0.91 | 4.23 | 12220 | 1544 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C8R | 45308 | 2024-10-12 | 2024-06-12 | 2.83 | 3.00 | 2.86 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.12 | 0.00 | 2.220 | 3.55 | 0.95 | 2.4 | 97.6 | 0.0 | -0.07 | 0.70 | 0.90 | 4.57 | 3.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.51 | 0.00 | 1.653 | 2.71 | 1.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.23 | 0.73 | 0.91 | 4.23 | 12220 | 1544 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C8R | 45308 | 2024-11-16 | 2024-06-12 | 2.83 | 3.00 | 2.86 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.12 | 0.00 | 2.220 | 3.55 | 0.95 | 2.4 | 97.6 | 0.0 | -0.07 | 0.70 | 0.90 | 4.57 | 3.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.51 | 0.00 | 1.653 | 2.71 | 1.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.23 | 0.73 | 0.91 | 4.23 | 12220 | 1544 | 3 | 0 | 0 | 0 | 0 | logfile |