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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9FoR | 50628 | 2024-09-23 | 2024-06-12 | 2.75 | 2.54 | 2.63 | 2.8 | 0.012 | 2.11 | 5.0 | 0.10 | 12.86 | 0.01 | 2.496 | 1.38 | 3.17 | 7.4 | 91.5 | 1.1 | -5.01 | 0.49 | 0.92 | 7.55 | 2.7 | 0.003 | 0.86 | 0.0 | 0.04 | 15.96 | 0.00 | 2.632 | 1.08 | 1.59 | 6.4 | 93.6 | 0.0 | -5.31 | 0.37 | 0.53 | 0.91 | 6.33 | 3405 | 490 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C8R | 45308 | 2024-09-26 | 2024-06-12 | 2.83 | 3.00 | 2.86 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.12 | 0.00 | 2.220 | 3.55 | 0.95 | 2.4 | 97.6 | 0.0 | -0.07 | 0.70 | 0.90 | 4.57 | 3.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.51 | 0.00 | 1.653 | 2.71 | 1.26 | 2.0 | 98.0 | 0.0 | 0.19 | 0.23 | 0.73 | 0.91 | 4.23 | 12220 | 1544 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-08-02 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.005 | 0.96 | 0.0 | 0.05 | 17.66 | 0.00 | 2.577 | 2.26 | 2.34 | 8.9 | 91.1 | 0.0 | -4.75 | 1.98 | 0.51 | 0.89 | 5.37 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-09-23 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-10-09 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-11-14 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-12-27 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-09-24 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-10-10 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-11-14 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-12-27 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9FNB | 50587 | 2024-12-27 | 2024-06-10 | 2.64 | 2.64 | 2.37 | 2.6 | 0.008 | 1.34 | 0.0 | 0.16 | 15.19 | 0.01 | 2.042 | 3.52 | 0.79 | 6.8 | 93.2 | 0.0 | -2.48 | 0.52 | 0.93 | 6.97 | 2.6 | 0.003 | 0.63 | 0.0 | 0.05 | 15.89 | 0.00 | 2.571 | 6.15 | 0.79 | 6.4 | 93.6 | 0.0 | -2.31 | 1.21 | 0.49 | 0.92 | 6.33 | 4568 | 540 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 9C6Q | 45254 | 2024-12-29 | 2024-06-08 | 3.18 | 3.22 | 3.07 | 3.3 | 0.005 | 0.64 | 0.0 | 0.04 | 15.43 | 0.00 | 2.139 | 5.91 | 0.19 | 6.6 | 93.4 | 0.1 | -0.07 | 0.59 | 0.70 | 0.92 | 3.3 | 0.004 | 0.65 | 0.0 | 0.04 | 17.24 | 0.00 | 2.523 | 3.08 | 1.61 | 7.6 | 92.4 | 0.0 | -0.02 | 0.66 | 0.67 | 0.81 | 2.22 | 9841 | 1190 | 2 | 12 | 0 | 0 | 0 | logfile |
✔ | 9C6Q | 45254 | 2024-09-25 | 2024-06-08 | 3.18 | 3.22 | 3.07 | 3.3 | 0.005 | 0.64 | 0.0 | 0.04 | 15.43 | 0.00 | 2.139 | 5.91 | 0.19 | 6.6 | 93.4 | 0.1 | -0.07 | 0.59 | 0.70 | 0.92 | 3.3 | 0.004 | 0.65 | 0.0 | 0.04 | 17.24 | 0.00 | 2.523 | 3.08 | 1.61 | 7.6 | 92.4 | 0.0 | -0.02 | 0.66 | 0.67 | 0.81 | 2.22 | 9841 | 1190 | 2 | 12 | 0 | 0 | 0 | logfile |
✔ | 9C6Q | 45254 | 2024-10-11 | 2024-06-08 | 3.18 | 3.22 | 3.07 | 3.3 | 0.005 | 0.64 | 0.0 | 0.04 | 15.43 | 0.00 | 2.139 | 5.91 | 0.19 | 6.6 | 93.4 | 0.1 | -0.07 | 0.59 | 0.70 | 0.92 | 3.3 | 0.004 | 0.65 | 0.0 | 0.04 | 17.24 | 0.00 | 2.523 | 3.08 | 1.61 | 7.6 | 92.4 | 0.0 | -0.02 | 0.66 | 0.67 | 0.81 | 2.22 | 9841 | 1190 | 2 | 12 | 0 | 0 | 0 | logfile |
✔ | 9C6Q | 45254 | 2024-11-15 | 2024-06-08 | 3.18 | 3.22 | 3.07 | 3.3 | 0.005 | 0.64 | 0.0 | 0.04 | 15.43 | 0.00 | 2.139 | 5.91 | 0.19 | 6.6 | 93.4 | 0.1 | -0.07 | 0.59 | 0.70 | 0.92 | 3.3 | 0.004 | 0.65 | 0.0 | 0.04 | 17.24 | 0.00 | 2.523 | 3.08 | 1.61 | 7.6 | 92.4 | 0.0 | -0.02 | 0.66 | 0.67 | 0.81 | 2.22 | 9841 | 1190 | 2 | 12 | 0 | 0 | 0 | logfile |
✔ | 9FMU | 50570 | 2024-12-31 | 2024-06-07 | 4.46 | 4.84 | 4.61 | 4.6 | 0.005 | 1.18 | 4.0 | 0.07 | 13.08 | 0.01 | 1.959 | 20.15 | 0.00 | 4.3 | 95.4 | 0.3 | -1.25 | 0.80 | 0.73 | — | 4.6 | 0.003 | 0.72 | 0.0 | 0.04 | 13.56 | 0.00 | 1.600 | 11.50 | 0.00 | 3.7 | 96.3 | 0.0 | -0.28 | 1.70 | 0.82 | 0.79 | — | 14763 | 1919 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 9C6K | 45249 | 2024-12-27 | 2024-06-07 | 2.94 | 3.79 | 2.95 | 3.1 | 0.007 | 0.76 | 0.0 | 0.04 | 26.38 | 0.01 | 1.888 | 17.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.84 | — | 3.1 | 0.006 | 0.67 | 0.0 | 0.04 | 25.57 | 0.00 | 1.882 | 12.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.89 | 0.87 | — | 1745 | 0 | 2 | 80 | 9 | 0 | 0 | logfile |
✔ | 9C6J | 45248 | 2024-12-28 | 2024-06-07 | 2.41 | 3.08 | 2.55 | 2.9 | 0.008 | 0.79 | 0.0 | 0.05 | 25.12 | 0.01 | 1.871 | 10.86 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.89 | — | 2.9 | 0.008 | 0.66 | 0.0 | 0.04 | 24.41 | 0.01 | 1.886 | 7.82 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.31 | 0.87 | 0.90 | — | 8345 | 0 | 2 | 387 | 21 | 0 | 0 | logfile |
✔ | 8ZTR | 60470 | 2024-12-30 | 2024-06-07 | 3.26 | 3.32 | 3.25 | 3.3 | 0.005 | 0.81 | 1.0 | 0.04 | 17.60 | 0.00 | 2.195 | 7.58 | 0.45 | 4.8 | 95.2 | 0.1 | -0.75 | 0.61 | 0.59 | 1.19 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 18.51 | 0.00 | 2.467 | 11.00 | 3.49 | 4.5 | 95.5 | 0.0 | -0.34 | 1.13 | 0.62 | 0.61 | 0.73 | 14072 | 1694 | 4 | 0 | 0 | 0 | 0 | logfile |