Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8S5E	19733	2025-05-19	2024-02-23	3.1	3.27	2.16	3.3	0.017	0.99	0.0	0.05	16.83	0.01	1.762	2.70	4.21	2.5	97.5	0.0	-1.35	0.64	0.86	2.35	3.2	0.003	0.55	0.0	0.04	16.02	0.00	1.750	1.46	2.77	2.2	97.8	0.0	0.71	0.65	0.63	0.86	2.49	18508	1141	21	0	14	14	9135	logfile
✔	9ARJ	43784	2025-05-23	2024-02-23	3.4	3.36	2.79	3.2	0.003	0.48	0.0	0.05	11.64	0.00	2.207	8.67	3.19	5.1	94.8	0.1	0.38	0.79	0.81	3.60	3.2	0.003	0.55	0.0	0.04	14.11	0.00	2.277	7.61	2.97	5.2	94.7	0.0	0.34	1.16	0.84	0.85	3.10	24188	2982	3	0	0	0	0	logfile
✔	8YF0	39206	2025-02-13	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.67	0.0	0.04	16.76	0.00	2.615	12.10	2.16	2.3	97.7	0.0	1.16	0.42	0.54	0.65	0.81	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2025-03-13	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.65	0.0	0.04	16.76	0.00	2.487	11.49	2.47	2.3	97.7	0.0	1.27	0.42	0.54	0.64	0.60	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2025-04-30	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.65	0.0	0.04	16.76	0.00	2.487	11.49	2.47	2.3	97.7	0.0	1.27	0.42	0.54	0.64	0.60	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2025-05-12	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.67	0.0	0.04	16.76	0.00	2.615	12.10	2.16	2.3	97.7	0.0	1.16	0.42	0.54	0.65	0.81	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2024-08-04	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.68	0.0	0.04	16.70	0.00	2.468	12.21	2.47	2.8	97.2	0.0	1.04	0.43	0.54	0.65	0.61	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2024-09-25	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.68	0.0	0.04	16.70	0.00	2.468	12.21	2.47	2.8	97.2	0.0	1.04	0.43	0.54	0.65	0.61	9181	1159	2	0	0	0	0	logfile
✔	8S5K	19738	2024-09-27	2024-02-23	3.8	3.96	3.75	3.9	0.004	0.75	0.0	0.04	14.70	0.01	1.967	7.13	0.15	3.0	96.8	0.1	0.58	0.76	0.72	1.58	3.8	0.004	0.59	0.0	0.04	15.39	0.00	2.277	7.02	1.29	4.3	95.6	0.0	0.31	1.02	0.76	0.72	1.39	63840	4056	16	0	8	0	31936	logfile
✔	8S5K	19738	2025-01-20	2024-02-23	3.8	3.96	3.75	3.9	0.004	0.75	0.0	0.04	14.70	0.01	1.967	7.13	0.15	3.0	96.8	0.1	0.58	0.76	0.72	1.58	3.8	0.003	0.58	0.0	0.04	15.46	0.00	2.284	6.48	1.05	3.9	96.1	0.0	0.37	1.02	0.76	0.72	1.36	63840	4056	16	0	8	0	31936	logfile
✔	9ARi	43783	2025-01-23	2024-02-23	3.9	4.18	4.02	4.1	0.007	1.12	45.0	0.07	10.71	0.01	1.816	12.63	9.33	6.9	92.9	0.3	-3.31	0.70	0.72	1.20	4.1	0.003	0.68	0.0	0.04	12.71	0.00	2.406	6.52	4.93	8.3	91.7	0.0	-0.79	1.22	0.69	0.71	1.15	20756	3178	6	0	0	0	0	logfile
✔	8YF0	39206	2024-10-11	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.68	0.0	0.04	16.70	0.00	2.468	12.21	2.47	2.8	97.2	0.0	1.04	0.43	0.54	0.65	0.61	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2024-11-15	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.68	0.0	0.04	16.70	0.00	2.468	12.21	2.47	2.8	97.2	0.0	1.04	0.43	0.54	0.65	0.61	9181	1159	2	0	0	0	0	logfile
✔	8YF0	39206	2024-12-28	2024-02-23	3.49	3.73	3.58	3.7	0.003	0.59	0.0	0.04	14.65	0.00	2.271	10.72	0.00	2.8	97.2	0.0	0.97	0.52	0.61	0.74	3.7	0.003	0.68	0.0	0.04	16.70	0.00	2.468	12.21	2.47	2.8	97.2	0.0	1.04	0.43	0.54	0.65	0.61	9181	1159	2	0	0	0	0	logfile
✔	9ARi	43783	2024-11-20	2024-02-23	3.9	4.18	4.02	4.1	0.007	1.12	45.0	0.07	10.71	0.01	1.816	12.63	9.33	6.9	92.9	0.3	-3.31	0.70	0.72	1.20	4.1	0.004	0.70	0.0	0.04	12.76	0.00	2.439	7.07	5.87	8.4	91.6	0.0	-1.04	1.23	0.70	0.72	1.23	20756	3178	6	0	0	0	0	logfile
✔	8S5K	19738	2024-10-13	2024-02-23	3.8	3.96	3.75	3.9	0.004	0.75	0.0	0.04	14.70	0.01	1.967	7.13	0.15	3.0	96.8	0.1	0.58	0.76	0.72	1.58	3.8	0.006	0.64	0.0	0.04	15.37	0.00	2.254	7.42	1.17	5.1	94.9	0.0	0.25	1.02	0.76	0.72	1.51	63840	4056	16	0	8	0	31936	logfile
✔	9ARi	43783	2024-09-29	2024-02-23	3.9	4.18	4.02	4.1	0.007	1.12	45.0	0.07	10.71	0.01	1.816	12.63	9.33	6.9	92.9	0.3	-3.31	0.70	0.72	1.20	4.1	0.004	0.70	0.0	0.04	12.76	0.00	2.439	7.07	5.87	8.4	91.6	0.0	-1.04	1.23	0.70	0.72	1.23	20756	3178	6	0	0	0	0	logfile
✔	9ARi	43783	2024-08-07	2024-02-23	3.9	4.18	4.02	4.1	0.007	1.12	45.0	0.07	10.71	0.01	1.816	12.63	9.33	6.9	92.9	0.3	-3.31	0.70	0.72	1.20	4.1	0.004	0.70	0.0	0.04	12.76	0.00	2.439	7.07	5.87	8.4	91.6	0.0	-1.04	1.23	0.70	0.72	1.23	20756	3178	6	0	0	0	0	logfile
✔	9ARi	43783	2025-05-21	2024-02-23	3.9	4.18	4.01	4.1	0.010	1.16	45.0	0.07	10.71	0.01	1.816	12.63	9.33	6.9	92.9	0.3	-3.31	0.70	0.72	1.20	4.1	0.002	0.65	0.0	0.04	12.73	0.00	2.385	6.27	4.34	7.6	92.4	0.0	-0.55	1.22	0.69	0.70	1.01	20756	3178	6	0	0	0	0	logfile
✔	8S5K	19738	2024-12-30	2024-02-23	3.8	3.96	3.75	3.9	0.004	0.75	0.0	0.04	14.70	0.01	1.967	7.13	0.15	3.0	96.8	0.1	0.58	0.76	0.72	1.58	3.8	0.006	0.64	0.0	0.04	15.37	0.00	2.254	7.42	1.17	5.1	94.9	0.0	0.25	1.02	0.76	0.72	1.51	63840	4056	16	0	8	0	31936	logfile

• ← previous
• Page 327 of 5030
• next →