Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8S4U	19716	2025-05-09	2024-02-22	3.09	3.17	2.96	3.1	0.006	0.65	1.0	0.05	14.85	0.01	2.272	7.16	0.24	4.2	95.8	0.0	-0.73	0.61	0.80	2.33	3.1	0.004	0.63	0.0	0.04	15.66	0.00	2.567	5.90	4.02	3.0	97.0	0.0	1.25	0.31	0.66	0.84	2.47	3980	502	3	0	1	0	0	logfile
✔	8YE9	39191	2024-12-30	2024-02-22	3.43	3.69	3.54	3.7	0.007	1.01	0.0	0.06	15.50	0.01	2.195	3.79	0.24	7.9	92.1	0.0	-4.35	0.73	0.75	2.64	3.7	0.002	0.60	0.0	0.04	17.43	0.00	2.488	4.52	2.17	4.0	96.0	0.0	-0.33	1.30	0.73	0.74	1.81	13559	1448	3	90	0	0	0	logfile
✔	8YE9	39191	2024-11-17	2024-02-22	3.43	3.69	3.54	3.7	0.007	1.01	0.0	0.06	15.50	0.01	2.195	3.79	0.24	7.9	92.1	0.0	-4.35	0.73	0.75	2.64	3.7	0.002	0.60	0.0	0.04	17.43	0.00	2.488	4.52	2.17	4.0	96.0	0.0	-0.33	1.30	0.73	0.74	1.81	13559	1448	3	90	0	0	0	logfile
✔	8YE9	39191	2024-10-12	2024-02-22	3.43	3.69	3.54	3.7	0.007	1.01	0.0	0.06	15.50	0.01	2.195	3.79	0.24	7.9	92.1	0.0	-4.35	0.73	0.75	2.64	3.7	0.002	0.60	0.0	0.04	17.43	0.00	2.488	4.52	2.17	4.0	96.0	0.0	-0.33	1.30	0.73	0.74	1.81	13559	1448	3	90	0	0	0	logfile
✔	8YE9	39191	2024-09-26	2024-02-22	3.43	3.69	3.54	3.7	0.007	1.01	0.0	0.06	15.50	0.01	2.195	3.79	0.24	7.9	92.1	0.0	-4.35	0.73	0.75	2.64	3.7	0.002	0.60	0.0	0.04	17.43	0.00	2.488	4.52	2.17	4.0	96.0	0.0	-0.33	1.30	0.73	0.74	1.81	13559	1448	3	90	0	0	0	logfile
✔	8YEo	39200	2024-09-30	2024-02-22	3.44	4.39	3.47	3.8	0.003	0.60	0.0	0.04	20.20	0.00	2.252	6.90	0.42	5.0	95.0	0.0	-0.97	0.92	0.85	2.26	3.8	0.003	0.61	0.0	0.04	20.07	0.00	2.473	7.75	2.39	5.1	94.9	0.0	-0.06	0.45	0.93	0.90	2.24	24197	2680	12	119	0	0	0	logfile
✔	8YEo	39200	2025-05-23	2024-02-22	3.44	4.39	3.47	3.8	0.003	0.60	0.0	0.04	20.20	0.00	2.252	6.90	0.42	5.0	95.0	0.0	-0.97	0.92	0.85	2.26	3.8	0.005	0.66	0.0	0.04	20.20	0.00	2.435	9.24	3.52	6.3	93.7	0.0	-0.36	0.48	0.93	0.90	2.15	24197	2680	12	119	0	0	0	logfile
✔	8YEo	39200	2024-08-08	2024-02-22	3.44	4.39	3.47	3.8	0.003	0.60	0.0	0.04	20.20	0.00	2.252	6.90	0.42	5.0	95.0	0.0	-0.97	0.92	0.85	2.26	3.8	0.003	0.61	0.0	0.04	20.07	0.00	2.473	7.75	2.39	5.1	94.9	0.0	-0.06	0.45	0.93	0.90	2.24	24197	2680	12	119	0	0	0	logfile
✔	8S52	19719	2024-12-26	2024-02-22	2.9	3.51	2.86	3.4	0.008	0.90	1.0	0.07	16.26	0.01	1.632	3.41	0.06	3.8	96.2	0.0	0.02	0.72	0.79	2.28	3.4	0.003	0.63	0.0	0.04	17.81	0.00	1.970	7.24	1.18	3.4	96.6	0.0	0.60	0.39	0.65	0.77	2.01	44875	5277	32	127	11	0	0	logfile
✔	8YEo	39200	2025-01-25	2024-02-22	3.44	4.39	3.47	3.8	0.003	0.60	0.0	0.04	20.20	0.00	2.252	6.90	0.42	5.0	95.0	0.0	-0.97	0.92	0.85	2.26	3.8	0.005	0.66	0.0	0.04	20.20	0.00	2.435	9.24	3.52	6.3	93.7	0.0	-0.36	0.48	0.93	0.90	2.15	24197	2680	12	119	0	0	0	logfile
✔	8S50	19717	2025-05-26	2024-02-22	3.33	3.53	3.35	3.5	0.003	0.58	0.0	0.05	13.59	0.00	1.883	10.58	0.00	8.8	91.2	0.0	-1.25	0.78	0.81	3.26	3.5	0.002	0.50	0.0	0.04	14.32	0.00	2.442	8.20	0.00	8.2	91.8	0.0	-1.40	0.28	0.77	0.81	2.94	28654	1848	24	0	8	214	14016	logfile
✔	8YEi	39196	2025-05-19	2024-02-22	2.93	3.28	3.07	21.0	0.004	0.70	0.0	0.05	13.13	0.01	2.280	6.96	0.00	3.2	96.8	0.0	-1.07	0.14	0.01	0.34	21.0	0.004	0.81	0.0	0.05	15.41	0.01	2.227	19.62	2.66	7.6	92.4	0.0	-1.83	0.97	0.26	0.19	0.34	18253	2327	7	0	0	0	0	logfile
✔	8YEH	39195	2025-05-23	2024-02-22	2.86	2.96	2.77	18.0	0.003	0.56	0.0	0.05	12.54	0.01	2.218	3.97	0.00	3.1	96.9	0.0	-0.16	0.08	0.00	0.19	18.0	0.003	0.69	0.0	0.04	15.29	0.00	2.508	10.15	2.16	5.7	94.3	0.0	-1.26	0.96	0.23	0.19	0.05	25195	3225	15	0	0	0	0	logfile
✔	8YEF	39193	2025-05-19	2024-02-22	4.3	4.72	4.48	4.4	0.005	0.90	0.0	0.06	13.94	0.01	2.234	10.30	0.10	6.0	94.0	0.0	-1.67	0.86	0.83	—	4.4	0.004	0.69	0.0	0.04	14.09	0.00	2.399	18.29	0.00	6.6	93.4	0.0	-1.45	0.46	0.86	0.84	—	18074	2307	7	0	0	0	0	logfile
✔	8YE6	39190	2024-10-12	2024-02-22	2.95	3.10	2.95	3.1	0.010	1.07	0.0	0.06	15.48	0.01	2.259	3.40	0.16	5.4	94.6	0.0	-4.09	0.71	0.80	4.13	3.1	0.002	0.59	0.0	0.04	18.02	0.00	2.286	5.08	2.16	2.5	97.5	0.0	0.48	0.68	0.72	0.81	2.89	13603	1447	3	92	0	0	0	logfile
✔	8YE9	39191	2025-01-19	2024-02-22	3.43	3.69	3.54	3.7	0.007	1.01	0.0	0.06	15.50	0.01	2.195	3.79	0.24	7.9	92.1	0.0	-4.35	0.73	0.75	2.64	3.7	0.002	0.60	0.0	0.04	17.39	0.00	2.475	4.41	1.61	4.1	95.9	0.0	-0.24	1.30	0.73	0.74	1.66	13559	1448	3	90	0	0	0	logfile
✔	8YE6	39190	2024-11-17	2024-02-22	2.95	3.10	2.95	3.1	0.010	1.07	0.0	0.06	15.48	0.01	2.259	3.40	0.16	5.4	94.6	0.0	-4.09	0.71	0.80	4.13	3.1	0.002	0.59	0.0	0.04	18.02	0.00	2.286	5.08	2.16	2.5	97.5	0.0	0.48	0.68	0.72	0.81	2.89	13603	1447	3	92	0	0	0	logfile
✔	8YE6	39190	2025-05-15	2024-02-22	2.95	3.10	2.95	3.1	0.010	1.07	0.0	0.06	15.48	0.01	2.259	3.40	0.16	5.4	94.6	0.0	-4.09	0.71	0.80	4.13	3.1	0.003	0.60	0.0	0.04	17.99	0.00	2.280	5.16	2.00	2.9	97.1	0.0	0.45	0.66	0.72	0.81	2.85	13603	1447	3	92	0	0	0	logfile
✔	8YE6	39190	2024-09-26	2024-02-22	2.95	3.10	2.95	3.1	0.010	1.07	0.0	0.06	15.48	0.01	2.259	3.40	0.16	5.4	94.6	0.0	-4.09	0.71	0.80	4.13	3.1	0.002	0.59	0.0	0.04	18.02	0.00	2.286	5.08	2.16	2.5	97.5	0.0	0.48	0.68	0.72	0.81	2.89	13603	1447	3	92	0	0	0	logfile
✔	8YE9	39191	2025-05-15	2024-02-22	3.43	3.69	3.54	3.7	0.007	1.01	0.0	0.06	15.50	0.01	2.195	3.79	0.24	7.9	92.1	0.0	-4.35	0.73	0.75	2.64	3.7	0.002	0.60	0.0	0.04	17.39	0.00	2.475	4.41	1.61	4.1	95.9	0.0	-0.24	1.30	0.73	0.74	1.66	13559	1448	3	90	0	0	0	logfile

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