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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9CiA | 45615 | 2025-01-15 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.004 | 0.72 | 0.0 | 0.04 | 16.11 | 0.00 | 2.450 | 13.20 | 4.83 | 4.8 | 95.2 | 0.0 | -0.85 | 0.58 | 0.60 | 0.75 | 1.72 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CiA | 45615 | 2025-03-12 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.006 | 1.06 | 1.0 | 0.05 | 16.17 | 0.00 | 2.021 | 16.46 | 4.95 | 6.8 | 93.2 | 0.0 | -0.81 | 0.56 | 0.61 | 0.76 | 1.50 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CiA | 45615 | 2024-08-03 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.005 | 0.73 | 0.0 | 0.04 | 16.14 | 0.00 | 2.461 | 12.36 | 5.31 | 5.9 | 94.1 | 0.0 | -0.53 | 0.56 | 0.60 | 0.75 | 1.65 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CiA | 45615 | 2024-09-24 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.005 | 0.73 | 0.0 | 0.04 | 16.14 | 0.00 | 2.461 | 12.36 | 5.31 | 5.9 | 94.1 | 0.0 | -0.53 | 0.56 | 0.60 | 0.75 | 1.65 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CiA | 45615 | 2024-12-28 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.005 | 0.73 | 0.0 | 0.04 | 16.14 | 0.00 | 2.461 | 12.36 | 5.31 | 5.9 | 94.1 | 0.0 | -0.53 | 0.56 | 0.60 | 0.75 | 1.65 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CiA | 45615 | 2024-11-15 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.005 | 0.73 | 0.0 | 0.04 | 16.14 | 0.00 | 2.461 | 12.36 | 5.31 | 5.9 | 94.1 | 0.0 | -0.53 | 0.56 | 0.60 | 0.75 | 1.65 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9CiA | 45615 | 2024-10-10 | 2024-07-03 | 3.39 | 3.87 | 3.61 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 13.15 | 0.01 | 2.263 | 5.57 | 0.12 | 4.4 | 95.6 | 0.0 | -1.69 | 0.58 | 0.73 | 2.21 | 3.8 | 0.005 | 0.73 | 0.0 | 0.04 | 16.14 | 0.00 | 2.461 | 12.36 | 5.31 | 5.9 | 94.1 | 0.0 | -0.53 | 0.56 | 0.60 | 0.75 | 1.65 | 7918 | 1025 | 13 | 0 | 1 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2025-01-17 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.71 | 1.0 | 0.04 | 17.06 | 0.00 | 2.309 | 11.84 | 5.63 | 4.7 | 95.3 | 0.0 | -0.19 | 0.99 | 0.60 | 0.71 | 1.52 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHT | 45601 | 2025-02-12 | 2024-07-02 | 3.54 | 3.73 | 3.59 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 14.85 | 0.01 | 2.203 | 16.59 | 0.32 | 9.9 | 90.0 | 0.1 | -1.62 | 0.54 | 0.47 | 0.88 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.54 | 0.00 | 2.448 | 13.45 | 1.16 | 9.5 | 90.4 | 0.1 | -1.31 | 0.97 | 0.55 | 0.49 | 0.68 | 8445 | 1034 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-09-25 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHT | 45601 | 2025-03-12 | 2024-07-02 | 3.54 | 3.73 | 3.57 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.85 | 0.01 | 2.203 | 16.59 | 0.32 | 9.9 | 90.0 | 0.1 | -1.62 | 0.54 | 0.47 | 0.88 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 16.55 | 0.00 | 2.482 | 13.45 | 1.16 | 9.6 | 90.3 | 0.1 | -1.41 | 0.98 | 0.55 | 0.50 | 0.81 | 8445 | 1034 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-11-16 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-10-11 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-12-29 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-08-04 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2025-02-14 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.71 | 1.0 | 0.04 | 17.06 | 0.00 | 2.309 | 11.84 | 5.63 | 4.7 | 95.3 | 0.0 | -0.19 | 0.99 | 0.60 | 0.71 | 1.52 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHX | 45604 | 2024-12-27 | 2024-07-02 | 3.5 | 3.91 | 3.87 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.88 | 0.00 | 2.146 | 9.43 | 0.00 | 4.9 | 95.1 | 0.0 | -0.53 | 0.65 | 0.68 | 2.27 | 3.9 | 0.002 | 0.64 | 0.0 | 0.04 | 16.48 | 0.00 | 2.492 | 6.76 | 2.23 | 3.3 | 96.7 | 0.0 | -0.03 | 0.45 | 0.64 | 0.72 | 1.09 | 7129 | 889 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2025-01-14 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 15.95 | 0.00 | 2.440 | 4.32 | 2.85 | 5.8 | 94.2 | 0.0 | -0.09 | 0.46 | 0.71 | 0.83 | 1.47 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2024-12-27 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 15.95 | 0.00 | 2.126 | 4.68 | 2.58 | 5.2 | 94.8 | 0.0 | 0.01 | 0.47 | 0.71 | 0.82 | 1.44 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2025-03-12 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 15.94 | 0.00 | 2.372 | 4.18 | 2.45 | 5.4 | 94.6 | 0.0 | -0.03 | 0.46 | 0.70 | 0.83 | 1.49 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |