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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9CHX | 45604 | 2025-01-14 | 2024-07-02 | 3.5 | 3.91 | 3.87 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.88 | 0.00 | 2.146 | 9.43 | 0.00 | 4.9 | 95.1 | 0.0 | -0.53 | 0.65 | 0.68 | 2.27 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.51 | 0.00 | 2.488 | 6.83 | 2.88 | 3.8 | 96.2 | 0.0 | -0.03 | 0.45 | 0.65 | 0.72 | 1.34 | 7129 | 889 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHV | 45603 | 2024-12-27 | 2024-07-02 | 3.95 | 4.29 | 3.77 | 4.3 | 0.009 | 1.53 | 33.0 | 0.11 | 15.28 | 0.01 | 2.106 | 11.74 | 4.86 | 6.9 | 93.1 | 0.0 | -1.78 | 0.65 | 0.66 | 0.86 | 4.3 | 0.003 | 0.68 | 0.0 | 0.04 | 16.64 | 0.00 | 2.402 | 7.18 | 3.79 | 4.1 | 95.9 | 0.0 | -0.42 | 1.42 | 0.70 | 0.74 | 0.97 | 6644 | 873 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9iMA | 60686 | 2024-11-14 | 2024-07-02 | 2.65 | 3.02 | 2.78 | 3.0 | 0.003 | 0.70 | 0.0 | 0.04 | 12.29 | 0.01 | 2.292 | 4.08 | 0.00 | 4.3 | 95.7 | 0.0 | 0.12 | 0.57 | 0.86 | 3.50 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 14.61 | 0.00 | 2.540 | 3.95 | 2.19 | 4.6 | 95.2 | 0.1 | 1.16 | 0.39 | 0.58 | 0.88 | 3.79 | 7472 | 933 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9iM6 | 60685 | 2025-03-13 | 2024-07-02 | 3.21 | 3.45 | 3.24 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 18.98 | 0.01 | 2.142 | 7.20 | 0.20 | 6.4 | 93.2 | 0.4 | 1.15 | 0.65 | 0.84 | 1.89 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 18.96 | 0.00 | 2.571 | 6.20 | 2.13 | 6.3 | 93.5 | 0.3 | 1.67 | 0.29 | 0.65 | 0.84 | 2.06 | 8982 | 1134 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9iM6 | 60685 | 2025-01-16 | 2024-07-02 | 3.21 | 3.45 | 3.24 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 18.98 | 0.01 | 2.142 | 7.20 | 0.20 | 6.4 | 93.2 | 0.4 | 1.15 | 0.65 | 0.84 | 1.89 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 19.02 | 0.00 | 2.571 | 6.31 | 1.93 | 6.5 | 93.3 | 0.3 | 1.83 | 0.29 | 0.64 | 0.83 | 1.74 | 8982 | 1134 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-11-16 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2025-01-17 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.71 | 1.0 | 0.04 | 17.06 | 0.00 | 2.309 | 11.84 | 5.63 | 4.7 | 95.3 | 0.0 | -0.19 | 0.99 | 0.60 | 0.71 | 1.52 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHT | 45601 | 2025-02-12 | 2024-07-02 | 3.54 | 3.73 | 3.59 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 14.85 | 0.01 | 2.203 | 16.59 | 0.32 | 9.9 | 90.0 | 0.1 | -1.62 | 0.54 | 0.47 | 0.88 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.54 | 0.00 | 2.448 | 13.45 | 1.16 | 9.5 | 90.4 | 0.1 | -1.31 | 0.97 | 0.55 | 0.49 | 0.68 | 8445 | 1034 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-09-25 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-10-11 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHT | 45601 | 2025-03-12 | 2024-07-02 | 3.54 | 3.73 | 3.57 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.85 | 0.01 | 2.203 | 16.59 | 0.32 | 9.9 | 90.0 | 0.1 | -1.62 | 0.54 | 0.47 | 0.88 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 16.55 | 0.00 | 2.482 | 13.45 | 1.16 | 9.6 | 90.3 | 0.1 | -1.41 | 0.98 | 0.55 | 0.50 | 0.81 | 8445 | 1034 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2025-03-12 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 15.94 | 0.00 | 2.372 | 4.18 | 2.45 | 5.4 | 94.6 | 0.0 | -0.03 | 0.46 | 0.70 | 0.83 | 1.49 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2025-02-12 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 15.95 | 0.00 | 2.440 | 4.32 | 2.85 | 5.8 | 94.2 | 0.0 | -0.09 | 0.46 | 0.71 | 0.83 | 1.47 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-08-04 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2025-01-14 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 15.95 | 0.00 | 2.440 | 4.32 | 2.85 | 5.8 | 94.2 | 0.0 | -0.09 | 0.46 | 0.71 | 0.83 | 1.47 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHU | 45602 | 2024-12-27 | 2024-07-02 | 3.49 | 3.92 | 3.50 | 3.9 | 0.006 | 0.86 | 3.0 | 0.06 | 14.03 | 0.00 | 2.165 | 7.85 | 0.41 | 6.6 | 93.4 | 0.0 | -1.06 | 0.71 | 0.80 | 2.51 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 15.95 | 0.00 | 2.126 | 4.68 | 2.58 | 5.2 | 94.8 | 0.0 | 0.01 | 0.47 | 0.71 | 0.82 | 1.44 | 7009 | 887 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9CHX | 45604 | 2024-12-27 | 2024-07-02 | 3.5 | 3.91 | 3.87 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.88 | 0.00 | 2.146 | 9.43 | 0.00 | 4.9 | 95.1 | 0.0 | -0.53 | 0.65 | 0.68 | 2.27 | 3.9 | 0.002 | 0.64 | 0.0 | 0.04 | 16.48 | 0.00 | 2.492 | 6.76 | 2.23 | 3.3 | 96.7 | 0.0 | -0.03 | 0.45 | 0.64 | 0.72 | 1.09 | 7129 | 889 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2024-12-29 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.72 | 1.0 | 0.05 | 17.13 | 0.00 | 2.298 | 11.45 | 5.11 | 4.0 | 96.0 | 0.0 | -0.22 | 0.99 | 0.61 | 0.72 | 1.49 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9Ci8 | 45614 | 2025-02-14 | 2024-07-02 | 3.01 | 3.35 | 3.04 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.01 | 2.258 | 6.33 | 4.93 | 3.7 | 96.3 | 0.0 | -0.84 | 0.59 | 0.67 | 1.46 | 3.4 | 0.005 | 0.71 | 1.0 | 0.04 | 17.06 | 0.00 | 2.309 | 11.84 | 5.63 | 4.7 | 95.3 | 0.0 | -0.19 | 0.99 | 0.60 | 0.71 | 1.52 | 10466 | 1382 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CHP | 45597 | 2025-01-22 | 2024-07-01 | 3.3 | 3.33 | 3.28 | 3.4 | 0.013 | 1.75 | 0.0 | 0.09 | 11.61 | 0.02 | 2.568 | 0.00 | 0.00 | 1.8 | 98.2 | 0.0 | -0.91 | 0.53 | 0.78 | 3.14 | 3.4 | 0.003 | 0.51 | 0.0 | 0.04 | 15.32 | 0.00 | 2.439 | 1.78 | 1.18 | 4.0 | 96.0 | 0.0 | 2.56 | 1.28 | 0.52 | 0.78 | 3.03 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |