The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8XZG | 38795 | 2025-05-10 | 2024-01-21 | 3.2 | 3.59 | 3.31 | 3.6 | 0.008 | 1.02 | 0.0 | 0.06 | 14.04 | 0.00 | 2.173 | 9.19 | 1.56 | 6.1 | 93.8 | 0.1 | -2.72 | 0.62 | 0.77 | 2.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7172 | 919 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZG | 38795 | 2025-04-28 | 2024-01-21 | 3.2 | 3.59 | 3.31 | 3.6 | 0.008 | 1.02 | 0.0 | 0.06 | 14.04 | 0.00 | 2.173 | 9.19 | 1.56 | 6.1 | 93.8 | 0.1 | -2.72 | 0.62 | 0.77 | 2.19 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 15.87 | 0.00 | 2.524 | 4.42 | 2.46 | 3.4 | 96.6 | 0.0 | -0.02 | 0.43 | 0.56 | 0.75 | 1.53 | 7172 | 919 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZG | 38795 | 2025-03-12 | 2024-01-21 | 3.2 | 3.59 | 3.31 | 3.6 | 0.008 | 0.88 | 0.0 | 0.06 | 14.04 | 0.00 | 2.173 | 9.19 | 1.56 | 6.1 | 93.8 | 0.1 | -2.72 | 0.62 | 0.77 | 2.19 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 15.87 | 0.00 | 2.524 | 4.42 | 2.46 | 3.4 | 96.6 | 0.0 | -0.02 | 0.43 | 0.56 | 0.75 | 1.53 | 7172 | 919 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 8XZV | 38799 | 2024-12-29 | 2024-01-21 | 3.16 | 3.46 | 3.38 | 3.4 | 0.003 | 0.72 | 1.0 | 0.05 | 17.68 | 0.01 | 2.149 | 14.42 | 1.48 | 10.9 | 88.2 | 0.9 | -2.26 | 0.67 | 0.78 | 1.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 58999 | 7497 | 20 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XZH | 38796 | 2025-01-15 | 2024-01-21 | 2.6 | 2.02 | — | 1.6 | 0.012 | 0.97 | 0.0 | 0.07 | 13.62 | 0.01 | 2.171 | 7.47 | 0.61 | 4.3 | 95.6 | 0.1 | -1.34 | 0.77 | 0.83 | 5.30 | 1.8 | 0.004 | 0.61 | 0.0 | 0.04 | 16.43 | 0.00 | 2.475 | 5.74 | 2.65 | 2.3 | 97.7 | 0.0 | 1.04 | 0.45 | 0.78 | 0.85 | 4.07 | 9048 | 1159 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZH | 38796 | 2025-02-13 | 2024-01-21 | 2.6 | 2.02 | — | 1.6 | 0.012 | 0.97 | 0.0 | 0.07 | 13.62 | 0.01 | 2.171 | 7.47 | 0.61 | 4.3 | 95.6 | 0.1 | -1.34 | 0.77 | 0.83 | 5.30 | 1.8 | 0.004 | 0.61 | 0.0 | 0.04 | 16.43 | 0.00 | 2.475 | 5.74 | 2.65 | 2.3 | 97.7 | 0.0 | 1.04 | 0.45 | 0.78 | 0.85 | 4.07 | 9048 | 1159 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZH | 38796 | 2025-03-13 | 2024-01-21 | 2.6 | 2.02 | — | 1.6 | 0.012 | 0.97 | 0.0 | 0.07 | 13.62 | 0.01 | 2.171 | 7.47 | 0.61 | 4.3 | 95.6 | 0.1 | -1.34 | 0.77 | 0.83 | 5.30 | 1.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.34 | 0.00 | 2.497 | 5.41 | 2.14 | 2.1 | 97.9 | 0.0 | 1.11 | 0.94 | 0.77 | 0.84 | 3.98 | 9048 | 1159 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZH | 38796 | 2025-04-29 | 2024-01-21 | 2.6 | 2.02 | — | 1.6 | 0.012 | 0.97 | 0.0 | 0.07 | 13.62 | 0.01 | 2.171 | 7.47 | 0.61 | 4.2 | 95.7 | 0.1 | -1.34 | 0.77 | 0.83 | 5.30 | 1.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.34 | 0.00 | 2.497 | 5.41 | 2.14 | 2.1 | 97.9 | 0.0 | 1.11 | 0.94 | 0.77 | 0.84 | 3.98 | 9048 | 1159 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZB | 38792 | 2025-04-30 | 2024-01-21 | 3.12 | 4.44 | 3.15 | 3.8 | 0.011 | 1.65 | 8.0 | 0.13 | 17.47 | 0.01 | 1.941 | 19.64 | 4.45 | 1.7 | 97.8 | 0.5 | 2.75 | 0.82 | 0.70 | 2.45 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 17.14 | 0.00 | 2.485 | 6.39 | 1.15 | 2.7 | 97.3 | 0.0 | 1.95 | 1.25 | 0.89 | 0.85 | 2.25 | 6412 | 787 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 8XZB | 38792 | 2025-05-13 | 2024-01-21 | 3.12 | 4.44 | 3.15 | 3.8 | 0.011 | 1.65 | 8.0 | 0.13 | 17.47 | 0.01 | 1.941 | 19.64 | 4.45 | 1.7 | 97.8 | 0.5 | 2.75 | 0.82 | 0.70 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6412 | 787 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XZB | 38792 | 2024-08-04 | 2024-01-21 | 3.12 | 4.44 | 3.15 | 3.8 | 0.007 | 1.64 | 8.0 | 0.13 | 17.47 | 0.01 | 1.941 | 19.64 | 4.45 | 1.7 | 97.8 | 0.5 | 2.75 | 0.82 | 0.70 | 2.45 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 17.19 | 0.00 | 2.500 | 6.63 | 0.43 | 2.7 | 97.3 | 0.0 | 1.94 | 1.25 | 0.89 | 0.85 | 2.16 | 6412 | 787 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XZB | 38792 | 2024-09-25 | 2024-01-21 | 3.12 | 4.44 | 3.15 | 3.8 | 0.007 | 1.64 | 8.0 | 0.13 | 17.47 | 0.01 | 1.941 | 19.64 | 4.45 | 1.7 | 97.8 | 0.5 | 2.75 | 0.82 | 0.70 | 2.45 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 17.19 | 0.00 | 2.500 | 6.63 | 0.43 | 2.7 | 97.3 | 0.0 | 1.94 | 1.25 | 0.89 | 0.85 | 2.16 | 6412 | 787 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XZJ | 38798 | 2025-05-12 | 2024-01-21 | 3.0 | 2.01 | — | 1.7 | 0.011 | 0.97 | 0.0 | 0.06 | 11.33 | 0.01 | 2.252 | 11.85 | 2.72 | 1.8 | 97.9 | 0.3 | 0.36 | 0.70 | 0.73 | 4.12 | 1.6 | 0.003 | 0.62 | 0.0 | 0.04 | 15.11 | 0.00 | 2.549 | 7.75 | 2.22 | 2.1 | 97.8 | 0.1 | 1.10 | 1.18 | 0.73 | 0.80 | 3.08 | 9106 | 1162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZB | 38792 | 2024-10-11 | 2024-01-21 | 3.12 | 4.44 | 3.15 | 3.8 | 0.007 | 1.64 | 8.0 | 0.13 | 17.47 | 0.01 | 1.941 | 19.64 | 4.45 | 1.7 | 97.8 | 0.5 | 2.75 | 0.82 | 0.70 | 2.45 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 17.19 | 0.00 | 2.500 | 6.63 | 0.43 | 2.7 | 97.3 | 0.0 | 1.94 | 1.25 | 0.89 | 0.85 | 2.16 | 6412 | 787 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XZJ | 38798 | 2025-04-29 | 2024-01-21 | 3.0 | 2.01 | — | 1.7 | 0.011 | 0.97 | 0.0 | 0.06 | 11.33 | 0.01 | 2.252 | 11.85 | 2.72 | 1.8 | 97.9 | 0.3 | 0.36 | 0.70 | 0.73 | 4.12 | 1.6 | 0.004 | 0.66 | 0.0 | 0.04 | 15.10 | 0.00 | 2.544 | 7.97 | 2.32 | 2.6 | 97.2 | 0.2 | 0.94 | 1.18 | 0.74 | 0.80 | 3.15 | 9106 | 1162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZJ | 38798 | 2025-03-13 | 2024-01-21 | 3.0 | 2.01 | — | 1.7 | 0.011 | 0.94 | 0.0 | 0.06 | 11.33 | 0.01 | 2.252 | 11.85 | 2.72 | 1.8 | 97.9 | 0.3 | 0.36 | 0.70 | 0.73 | 4.12 | 1.6 | 0.005 | 0.67 | 0.0 | 0.04 | 15.16 | 0.00 | 2.541 | 7.75 | 2.12 | 2.5 | 97.5 | 0.1 | 0.99 | 1.18 | 0.74 | 0.80 | 3.20 | 9106 | 1162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZJ | 38798 | 2025-02-13 | 2024-01-21 | 3.0 | 2.01 | — | 1.7 | 0.011 | 0.94 | 0.0 | 0.06 | 11.33 | 0.01 | 2.252 | 11.85 | 2.72 | 1.8 | 97.9 | 0.3 | 0.36 | 0.70 | 0.73 | 4.12 | 1.6 | 0.004 | 0.65 | 0.0 | 0.04 | 15.14 | 0.00 | 2.547 | 7.97 | 2.32 | 2.4 | 97.5 | 0.1 | 0.93 | 1.18 | 0.74 | 0.80 | 3.12 | 9106 | 1162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZJ | 38798 | 2025-01-16 | 2024-01-21 | 3.0 | 2.01 | — | 1.7 | 0.011 | 0.94 | 0.0 | 0.06 | 11.33 | 0.01 | 2.252 | 11.85 | 2.72 | 1.8 | 97.9 | 0.3 | 0.36 | 0.70 | 0.73 | 4.12 | 1.6 | 0.004 | 0.65 | 0.0 | 0.04 | 15.14 | 0.00 | 2.547 | 7.97 | 2.32 | 2.4 | 97.5 | 0.1 | 0.93 | 1.18 | 0.74 | 0.80 | 3.12 | 9106 | 1162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZF | 38794 | 2025-01-16 | 2024-01-21 | 3.0 | 2.18 | — | 2.9 | 0.007 | 0.72 | 1.0 | 0.05 | 12.98 | 0.00 | 2.091 | 9.31 | 0.51 | 4.3 | 95.5 | 0.2 | -2.36 | 0.79 | 0.81 | 4.27 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 15.89 | 0.00 | 2.439 | 8.02 | 2.25 | 4.0 | 96.0 | 0.1 | 0.15 | 0.52 | 0.80 | 0.83 | 3.70 | 9062 | 1161 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XZF | 38794 | 2025-02-13 | 2024-01-21 | 3.0 | 2.18 | — | 2.9 | 0.007 | 0.72 | 1.0 | 0.05 | 12.98 | 0.00 | 2.091 | 9.31 | 0.51 | 4.3 | 95.5 | 0.2 | -2.36 | 0.79 | 0.81 | 4.27 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 15.89 | 0.00 | 2.439 | 8.02 | 2.25 | 4.0 | 96.0 | 0.1 | 0.15 | 0.52 | 0.80 | 0.83 | 3.70 | 9062 | 1161 | 7 | 0 | 1 | 0 | 0 | logfile |