Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8UYB	42798	2025-01-19	2023-11-13	3.87	4.18	3.89	3.9	0.002	0.51	0.0	0.04	12.23	0.00	2.054	8.53	0.00	4.2	95.8	0.0	1.15	0.70	0.85	1.29	3.9	0.003	0.67	0.0	0.04	14.13	0.00	2.000	8.67	1.43	4.0	96.0	0.0	1.29	1.00	0.71	0.86	0.93	13836	1796	4	0	8	0	0	logfile
✔	8UY9	42796	2025-03-11	2023-11-13	3.65	3.80	3.70	3.7	0.004	0.73	2.0	0.05	14.68	0.00	1.921	13.81	0.38	2.8	97.2	0.0	0.72	0.66	0.84	2.06	3.7	0.004	0.66	0.0	0.04	15.64	0.00	1.912	7.64	5.29	2.5	97.4	0.1	1.06	0.91	0.66	0.84	1.39	5982	859	2	0	1	0	0	logfile
✔	8UY9	42796	2025-02-11	2023-11-13	3.65	3.80	3.71	3.7	0.004	0.73	2.0	0.05	14.68	0.00	1.921	13.81	0.38	2.8	97.2	0.0	0.72	0.66	0.84	2.06	3.7	0.004	0.66	0.0	0.04	15.60	0.00	1.918	7.56	5.10	2.7	97.3	0.0	1.05	0.91	0.66	0.84	1.46	5982	859	2	0	1	0	0	logfile
✔	8UY9	42796	2024-12-27	2023-11-13	3.65	3.80	3.71	3.7	0.004	0.73	2.0	0.05	14.68	0.00	1.921	13.81	0.38	2.8	97.2	0.0	0.72	0.66	0.84	2.06	3.7	0.003	0.65	0.0	0.04	15.54	0.00	1.923	7.56	4.54	2.3	97.7	0.0	1.17	0.91	0.65	0.84	1.46	5982	859	2	0	1	0	0	logfile
✔	8UYB	42798	2024-12-30	2023-11-13	3.87	4.18	3.89	3.9	0.002	0.51	0.0	0.04	12.23	0.00	2.054	8.53	0.00	4.2	95.8	0.0	1.15	0.70	0.85	1.29	3.9	0.003	0.64	0.0	0.04	14.24	0.00	2.031	7.88	1.84	3.9	96.1	0.0	1.28	1.01	0.71	0.86	1.10	13836	1796	4	0	8	0	0	logfile
✔	8UY9	42796	2025-01-14	2023-11-13	3.65	3.80	3.71	3.7	0.004	0.73	2.0	0.05	14.68	0.00	1.921	13.81	0.38	2.8	97.2	0.0	0.72	0.66	0.84	2.06	3.7	0.004	0.66	0.0	0.04	15.60	0.00	1.918	7.56	5.10	2.7	97.3	0.0	1.05	0.91	0.66	0.84	1.46	5982	859	2	0	1	0	0	logfile
✔	8UY0	42791	2025-01-15	2023-11-11	3.2	3.52	3.23	3.7	0.004	0.55	0.0	0.04	13.39	0.00	2.236	4.62	0.11	1.9	98.1	0.0	0.91	0.55	0.74	2.67	3.7	0.003	0.56	0.0	0.04	15.56	0.00	2.414	3.57	1.24	2.1	97.9	0.0	1.54	0.37	0.56	0.77	2.51	8121	1031	6	0	1	0	0	logfile
✔	8UXV	42786	2025-01-15	2023-11-11	3.2	3.35	3.12	3.4	0.003	0.53	0.0	0.04	14.02	0.00	2.094	3.18	0.00	2.6	97.4	0.0	0.80	0.72	0.86	2.93	3.4	0.004	0.57	0.0	0.04	15.75	0.00	2.534	2.49	1.99	3.3	96.7	0.0	0.94	0.91	0.72	0.89	2.54	8065	1041	5	0	0	0	0	logfile
✔	8UXV	42786	2024-12-28	2023-11-11	3.2	3.35	3.12	3.4	0.003	0.53	0.0	0.04	14.02	0.00	2.094	3.18	0.00	2.6	97.4	0.0	0.80	0.72	0.86	2.93	3.4	0.002	0.51	0.0	0.04	15.62	0.00	2.538	2.56	1.52	2.2	97.8	0.0	1.21	0.91	0.72	0.88	2.34	8065	1041	5	0	0	0	0	logfile
✔	8UXV	42786	2024-11-15	2023-11-11	3.2	3.35	3.12	3.4	0.003	0.53	0.0	0.04	14.02	0.00	2.094	3.18	0.00	2.6	97.4	0.0	0.80	0.72	0.86	2.93	3.4	0.002	0.51	0.0	0.04	15.62	0.00	2.538	2.56	1.52	2.2	97.8	0.0	1.21	0.91	0.72	0.88	2.34	8065	1041	5	0	0	0	0	logfile
✔	8UXV	42786	2025-03-12	2023-11-11	3.2	3.35	3.12	3.4	0.003	0.53	0.0	0.04	14.02	0.00	2.094	3.18	0.00	2.6	97.4	0.0	0.80	0.72	0.86	2.93	3.4	0.004	0.58	0.0	0.04	15.66	0.00	2.539	2.49	1.64	3.5	96.5	0.0	1.00	0.91	0.73	0.89	2.65	8065	1041	5	0	0	0	0	logfile
✔	8UXV	42786	2025-02-12	2023-11-11	3.2	3.35	3.12	3.4	0.003	0.53	0.0	0.04	14.02	0.00	2.094	3.18	0.00	2.6	97.4	0.0	0.80	0.72	0.86	2.93	3.4	0.004	0.57	0.0	0.04	15.75	0.00	2.534	2.49	1.99	3.3	96.7	0.0	0.94	0.91	0.72	0.89	2.54	8065	1041	5	0	0	0	0	logfile
✘	8UXW	42787	2025-01-25	2023-11-11	2.7	2.92	2.78	3.0	0.013	1.92	15.0	0.10	15.35	0.02	1.860	0.28	2.69	3.0	97.0	0.0	-1.20	0.48	0.72	4.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	77359	4916	25	0	20	0	38330	logfile
✔	8UXW	42787	2024-02-19	2023-11-11	2.7	2.92	2.78	3.0	0.013	1.92	15.0	0.10	15.35	0.02	1.860	0.28	2.69	3.0	97.0	0.0	-1.20	0.48	0.72	4.73	3.0	0.003	0.59	0.0	0.04	16.64	0.00	1.840	4.54	1.76	2.1	97.9	0.0	0.54	0.88	0.65	0.86	3.90	77287	4916	25	0	20	0	38258	logfile
✔	8UXW	42787	2024-09-30	2023-11-11	2.7	2.92	2.78	3.0	0.013	1.92	15.0	0.10	15.35	0.02	1.860	0.28	2.69	3.0	97.0	0.0	-1.20	0.48	0.72	4.73	3.0	0.003	0.61	0.0	0.04	16.70	0.00	1.868	3.16	1.48	2.0	98.0	0.0	0.75	1.11	0.62	0.85	3.86	77359	4916	25	0	20	0	38330	logfile
✔	8UXX	42788	2024-09-30	2023-11-11	3.2	3.48	3.27	3.5	0.012	1.91	8.0	0.10	15.07	0.02	1.821	0.17	2.29	4.4	95.5	0.1	-2.07	0.64	0.74	3.38	3.5	0.003	0.62	0.0	0.04	15.97	0.00	0.978	4.25	1.64	3.3	96.7	0.0	-0.16	2.06	0.72	0.84	2.45	77402	4916	26	0	27	5	38340	logfile
✔	8UXX	42788	2025-01-25	2023-11-11	3.2	3.48	3.27	3.5	0.012	1.91	8.0	0.10	15.07	0.02	1.821	0.17	2.29	4.4	95.5	0.1	-2.07	0.64	0.74	3.38	3.5	0.004	0.62	0.0	0.04	15.90	0.00	0.980	4.21	1.57	3.3	96.7	0.0	-0.12	2.06	0.72	0.84	2.57	77402	4916	26	0	27	5	38340	logfile
✔	8UXX	42788	2024-02-19	2023-11-11	3.2	3.48	3.27	3.5	0.012	1.91	8.0	0.10	15.07	0.02	1.821	0.17	2.29	4.4	95.5	0.1	-2.07	0.64	0.74	3.38	3.5	0.004	0.70	1.0	0.04	15.81	0.00	0.884	6.44	1.67	3.4	96.6	0.0	-0.42	2.06	0.72	0.84	2.59	77330	4916	26	0	27	5	38268	logfile
✔	8UY0	42791	2025-02-12	2023-11-11	3.2	3.52	3.23	3.7	0.004	0.55	0.0	0.04	13.39	0.00	2.236	4.62	0.11	1.9	98.1	0.0	0.91	0.55	0.74	2.67	3.7	0.003	0.56	0.0	0.04	15.56	0.00	2.414	3.57	1.24	2.1	97.9	0.0	1.54	0.37	0.56	0.77	2.51	8121	1031	6	0	1	0	0	logfile
✔	8UY0	42791	2024-12-28	2023-11-11	3.2	3.52	3.23	3.7	0.004	0.55	0.0	0.04	13.39	0.00	2.236	4.62	0.11	1.9	98.1	0.0	0.91	0.55	0.74	2.67	3.7	0.003	0.57	0.0	0.04	15.73	0.00	2.463	3.75	1.69	1.9	98.1	0.0	1.46	0.38	0.62	0.81	2.64	8121	1031	6	0	1	0	0	logfile

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