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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8UXW | 42787 | 2025-01-25 | 2023-11-11 | 2.7 | 2.92 | 2.78 | 3.0 | 0.013 | 1.92 | 15.0 | 0.10 | 15.35 | 0.02 | 1.860 | 0.28 | 2.69 | 3.0 | 97.0 | 0.0 | -1.20 | 0.48 | 0.72 | 4.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 77359 | 4916 | 25 | 0 | 20 | 0 | 38330 | logfile |
✔ | 8UXW | 42787 | 2024-09-30 | 2023-11-11 | 2.7 | 2.92 | 2.78 | 3.0 | 0.013 | 1.92 | 15.0 | 0.10 | 15.35 | 0.02 | 1.860 | 0.28 | 2.69 | 3.0 | 97.0 | 0.0 | -1.20 | 0.48 | 0.72 | 4.73 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.70 | 0.00 | 1.868 | 3.16 | 1.48 | 2.0 | 98.0 | 0.0 | 0.75 | 1.11 | 0.62 | 0.85 | 3.86 | 77359 | 4916 | 25 | 0 | 20 | 0 | 38330 | logfile |
✔ | 8R3Z | 18878 | 2024-10-10 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 17.72 | 0.00 | 2.034 | 11.54 | 2.71 | 2.3 | 97.7 | 0.0 | 0.47 | 0.51 | 0.82 | 0.77 | 1.68 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2024-09-24 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 17.72 | 0.00 | 2.034 | 11.54 | 2.71 | 2.3 | 97.7 | 0.0 | 0.47 | 0.51 | 0.82 | 0.77 | 1.68 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2024-12-27 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 17.72 | 0.00 | 2.034 | 11.54 | 2.71 | 2.3 | 97.7 | 0.0 | 0.47 | 0.51 | 0.82 | 0.77 | 1.68 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2025-01-14 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 17.67 | 0.00 | 1.946 | 11.23 | 3.00 | 3.1 | 96.9 | 0.0 | 0.26 | 0.51 | 0.82 | 0.78 | 1.53 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2024-08-03 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 17.72 | 0.00 | 2.034 | 11.54 | 2.71 | 2.3 | 97.7 | 0.0 | 0.47 | 0.51 | 0.82 | 0.77 | 1.68 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2024-07-19 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 4.0 | 0.003 | 0.56 | 0.0 | 0.04 | 17.85 | 0.00 | 1.918 | 14.58 | 3.57 | 3.8 | 96.2 | 0.0 | 0.32 | 0.49 | 0.82 | 0.78 | 1.78 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2024-06-25 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 4.0 | 0.003 | 0.56 | 0.0 | 0.04 | 17.85 | 0.00 | 1.918 | 14.58 | 3.57 | 3.8 | 96.2 | 0.0 | 0.32 | 0.49 | 0.82 | 0.78 | 1.78 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2025-03-11 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 17.58 | 0.00 | 1.927 | 10.76 | 3.85 | 3.2 | 96.8 | 0.0 | 0.28 | 0.50 | 0.82 | 0.78 | 1.59 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2025-02-11 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 17.67 | 0.00 | 1.946 | 11.23 | 3.00 | 3.1 | 96.9 | 0.0 | 0.26 | 0.51 | 0.82 | 0.78 | 1.53 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3Z | 18878 | 2024-11-14 | 2023-11-10 | 3.4 | 4.16 | 3.41 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 17.44 | 0.00 | 1.932 | 14.50 | 0.29 | 3.5 | 96.5 | 0.0 | -0.21 | 0.83 | 0.79 | 1.95 | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 17.72 | 0.00 | 2.034 | 11.54 | 2.71 | 2.3 | 97.7 | 0.0 | 0.47 | 0.51 | 0.82 | 0.77 | 1.68 | 6389 | 755 | 3 | 6 | 1 | 0 | 0 | logfile |
✔ | 8R3T | 18874 | 2024-09-23 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.007 | 1.45 | 0.0 | 0.06 | 14.10 | 0.00 | 2.514 | 4.42 | 3.21 | 7.0 | 93.0 | 0.0 | -3.10 | 1.75 | 0.38 | 0.76 | 5.01 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2024-10-09 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.007 | 1.45 | 0.0 | 0.06 | 14.10 | 0.00 | 2.514 | 4.42 | 3.21 | 7.0 | 93.0 | 0.0 | -3.10 | 1.75 | 0.38 | 0.76 | 5.01 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2024-11-14 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.007 | 1.45 | 0.0 | 0.06 | 14.10 | 0.00 | 2.514 | 4.42 | 3.21 | 7.0 | 93.0 | 0.0 | -3.10 | 1.75 | 0.38 | 0.76 | 5.01 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2024-12-27 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.007 | 1.45 | 0.0 | 0.06 | 14.10 | 0.00 | 2.514 | 4.42 | 3.21 | 7.0 | 93.0 | 0.0 | -3.10 | 1.75 | 0.38 | 0.76 | 5.01 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2024-02-13 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.003 | 0.66 | 0.0 | 0.05 | 13.95 | 0.00 | 2.167 | 4.24 | 1.92 | 5.6 | 94.2 | 0.3 | -2.72 | 1.76 | 0.39 | 0.76 | 4.96 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2025-02-11 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.004 | 0.70 | 0.0 | 0.05 | 13.95 | 0.00 | 2.515 | 3.87 | 2.24 | 5.8 | 93.9 | 0.3 | -3.05 | 1.75 | 0.38 | 0.76 | 4.50 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2024-06-24 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.003 | 0.66 | 0.0 | 0.05 | 13.95 | 0.00 | 2.167 | 4.24 | 1.92 | 5.6 | 94.2 | 0.3 | -2.72 | 1.76 | 0.39 | 0.76 | 4.96 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✔ | 8R3T | 18874 | 2025-03-06 | 2023-11-10 | 3.1 | 3.18 | 2.93 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.007 | 1.43 | 0.0 | 0.05 | 13.80 | 0.00 | 2.496 | 3.87 | 2.56 | 5.6 | 94.4 | 0.0 | -2.98 | 1.75 | 0.38 | 0.75 | 4.83 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |