Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RKB	19267	2024-09-24	2023-12-23	3.12	2.74	3.26	3.0	0.003	0.50	0.0	0.03	13.64	0.00	0.214	21.59	0.00	4.5	95.4	0.2	2.03	0.65	0.68	0.98	3.0	0.003	0.62	0.0	0.04	16.87	0.00	2.523	6.10	2.20	4.0	95.8	0.2	1.83	0.94	0.77	0.85	2.46	50484	6504	24	0	0	0	0	logfile
✔	8RKB	19267	2025-01-15	2023-12-23	3.12	2.74	3.26	3.0	0.003	0.50	0.0	0.03	13.64	0.00	0.214	21.59	0.00	4.5	95.4	0.2	2.03	0.65	0.68	0.98	3.0	0.003	0.66	0.0	0.04	17.01	0.01	2.184	6.72	2.71	4.8	95.0	0.2	1.67	0.90	0.76	0.85	2.39	50484	6504	24	0	0	0	0	logfile
✔	8RKB	19267	2024-11-18	2023-12-23	3.12	2.74	3.26	3.0	0.003	0.50	0.0	0.03	13.64	0.00	0.214	21.59	0.00	4.5	95.4	0.2	2.03	0.65	0.68	0.98	2.9	0.003	0.64	0.0	0.04	16.90	0.00	2.455	6.30	2.27	4.5	95.3	0.2	1.71	0.94	0.77	0.85	2.55	50484	6504	24	0	0	0	0	logfile
✔	8RKB	19267	2024-10-10	2023-12-23	3.12	2.74	3.26	3.0	0.003	0.50	0.0	0.03	13.64	0.00	0.214	21.59	0.00	4.5	95.4	0.2	2.03	0.65	0.68	0.98	2.9	0.003	0.64	0.0	0.04	16.90	0.00	2.455	6.30	2.27	4.5	95.3	0.2	1.71	0.94	0.77	0.85	2.55	50484	6504	24	0	0	0	0	logfile
✔	8RKA	19266	2024-09-24	2023-12-23	3.12	3.09	3.24	3.1	0.002	0.49	0.0	0.04	13.37	0.00	2.094	8.66	0.00	4.5	95.5	0.0	2.40	0.74	0.69	0.79	3.0	0.003	0.59	0.0	0.04	16.66	0.00	2.374	6.28	2.20	4.3	95.7	0.0	2.23	1.29	0.83	0.86	2.35	50484	6504	24	0	0	0	0	logfile
✔	8RKA	19266	2024-10-10	2023-12-23	3.12	3.09	3.24	3.1	0.002	0.49	0.0	0.04	13.37	0.00	2.094	8.66	0.00	4.5	95.5	0.0	2.40	0.74	0.69	0.79	3.0	0.003	0.58	0.0	0.04	16.64	0.00	2.395	6.34	2.12	4.0	96.0	0.0	2.24	1.09	0.83	0.86	2.36	50484	6504	24	0	0	0	0	logfile
✔	8RKA	19266	2024-11-18	2023-12-23	3.12	3.09	3.24	3.1	0.002	0.49	0.0	0.04	13.37	0.00	2.094	8.66	0.00	4.5	95.5	0.0	2.40	0.74	0.69	0.79	3.0	0.003	0.58	0.0	0.04	16.64	0.00	2.395	6.34	2.12	4.0	96.0	0.0	2.24	1.09	0.83	0.86	2.36	50484	6504	24	0	0	0	0	logfile
✔	8RKA	19266	2024-12-27	2023-12-23	3.12	3.09	3.24	3.1	0.002	0.49	0.0	0.04	13.37	0.00	2.094	8.66	0.00	4.5	95.5	0.0	2.40	0.74	0.69	0.79	3.0	0.003	0.58	0.0	0.04	16.64	0.00	2.395	6.34	2.12	4.0	96.0	0.0	2.24	1.09	0.83	0.86	2.36	50484	6504	24	0	0	0	0	logfile
✔	8RKA	19266	2025-01-15	2023-12-23	3.12	3.09	3.24	3.1	0.002	0.49	0.0	0.04	13.37	0.00	2.094	8.66	0.00	4.5	95.5	0.0	2.40	0.74	0.69	0.79	3.0	0.002	0.56	0.0	0.04	16.66	0.00	2.378	6.20	1.91	3.6	96.4	0.0	2.29	1.29	0.83	0.85	2.30	50484	6504	24	0	0	0	0	logfile
✘	8RK5	19260	2024-10-13	2023-12-23	4.54	3.79	4.58	3.8	0.003	0.67	0.0	0.04	12.15	0.01	0.400	21.86	0.00	4.5	95.5	0.0	-1.01	0.67	0.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14424	1866	6	0	0	0	0	logfile
✔	8RK5	19260	2024-12-30	2023-12-23	4.54	3.79	4.58	3.8	0.003	0.67	0.0	0.04	12.15	0.01	0.555	21.86	0.00	4.5	95.5	0.0	-1.01	0.67	0.44	—	3.8	0.007	0.87	0.0	0.05	13.02	0.01	1.955	19.09	0.00	6.6	93.0	0.3	-2.19	0.78	0.67	0.44	—	14424	1866	6	0	0	0	0	logfile
✔	8RK5	19260	2025-01-19	2023-12-23	4.54	3.79	4.58	3.8	0.003	0.67	0.0	0.04	12.15	0.01	0.555	21.86	0.00	4.5	95.5	0.0	-1.01	0.67	0.44	—	3.7	0.005	0.89	0.0	0.05	12.93	0.01	1.741	21.02	0.00	8.4	91.6	0.0	-2.59	0.81	0.68	0.46	—	14424	1866	6	0	0	0	0	logfile
✘	8RK5	19260	2025-05-16	2023-12-23	4.54	3.79	4.60	3.8	0.013	0.67	0.0	0.04	12.15	0.01	0.555	21.86	0.00	4.5	95.5	0.0	-1.01	0.67	0.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14424	1866	6	0	0	0	0	logfile
✘	8RK5	19260	2024-09-26	2023-12-23	4.54	3.79	4.58	3.8	0.003	0.67	0.0	0.04	12.15	0.01	0.400	21.86	0.00	4.5	95.5	0.0	-1.01	0.67	0.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14424	1866	6	0	0	0	0	logfile
✘	8RK5	19260	2024-11-17	2023-12-23	4.54	3.79	4.58	3.8	0.003	0.67	0.0	0.04	12.15	0.01	0.400	21.86	0.00	4.5	95.5	0.0	-1.01	0.67	0.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14424	1866	6	0	0	0	0	logfile
✔	8XKi	38418	2025-05-23	2023-12-23	3.2	3.40	3.22	3.4	0.004	0.60	0.0	0.05	19.04	0.00	2.156	6.18	0.30	5.8	94.1	0.1	-2.04	0.75	0.82	2.39	3.3	0.002	0.63	1.0	0.04	16.96	0.00	2.429	4.07	3.20	5.3	94.6	0.1	-1.34	1.02	0.78	0.88	2.11	24431	3121	13	0	32	0	0	logfile
✔	8XKi	38418	2024-08-09	2023-12-23	3.2	3.40	3.22	3.4	0.004	0.58	0.0	0.05	19.04	0.00	2.156	6.18	0.30	5.8	94.1	0.1	-2.04	0.75	0.82	2.39	3.3	0.004	0.72	1.0	0.05	16.88	0.00	1.931	4.40	3.05	4.7	95.2	0.1	-1.15	1.02	0.77	0.88	2.20	24431	3121	13	0	32	0	0	logfile
✔	8XKi	38418	2024-09-30	2023-12-23	3.2	3.40	3.22	3.4	0.004	0.58	0.0	0.05	19.04	0.00	2.156	6.18	0.30	5.8	94.1	0.1	-2.04	0.75	0.82	2.39	3.3	0.004	0.72	1.0	0.05	16.88	0.00	1.931	4.40	3.05	4.7	95.2	0.1	-1.15	1.02	0.77	0.88	2.20	24431	3121	13	0	32	0	0	logfile
✔	8XKi	38418	2025-01-26	2023-12-23	3.2	3.40	3.22	3.4	0.004	0.58	0.0	0.05	19.04	0.00	2.156	6.18	0.30	5.8	94.1	0.1	-2.04	0.75	0.82	2.39	3.3	0.004	0.73	1.0	0.05	16.94	0.00	2.200	4.11	3.54	5.1	94.8	0.1	-1.28	1.02	0.78	0.88	2.14	24431	3121	13	0	32	0	0	logfile
✔	8RK8	19264	2025-05-13	2023-12-23	3.88	3.77	3.92	4.0	0.037	0.55	0.0	0.05	14.93	0.01	0.528	17.22	0.00	3.2	96.8	0.0	0.36	0.71	0.64	0.77	4.0	0.043	1.21	1.0	0.05	17.10	0.01	0.777	20.97	4.62	4.9	95.1	0.0	-0.23	1.24	0.78	0.83	1.39	11226	1512	6	0	0	0	0	logfile

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