Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	9JA0	61286	2024-10-15	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19716	2628	12	0	0	0	0	logfile
✔	9DBQ	46724	2025-02-14	2024-08-23	2.9	3.52	2.91	3.5	0.003	0.56	0.0	0.04	12.63	0.00	2.057	2.92	0.10	2.2	97.8	0.0	1.15	0.67	0.73	1.85	3.5	0.003	0.63	0.0	0.04	14.92	0.00	2.424	7.90	1.90	3.1	96.9	0.0	2.04	1.40	0.68	0.74	1.37	10062	1182	4	0	20	0	0	logfile
✔	9DBQ	46724	2025-01-16	2024-08-23	2.9	3.52	2.91	3.5	0.003	0.56	0.0	0.04	12.63	0.00	2.057	2.92	0.10	2.2	97.8	0.0	1.15	0.67	0.73	1.85	3.5	0.003	0.63	0.0	0.04	14.92	0.00	2.424	7.90	1.90	3.1	96.9	0.0	2.04	1.40	0.68	0.74	1.37	10062	1182	4	0	20	0	0	logfile
✔	9DBQ	46724	2025-05-13	2024-08-23	2.9	3.52	2.90	3.5	0.003	0.56	0.0	0.04	12.63	0.00	2.057	2.92	0.10	2.2	97.8	0.0	1.15	0.67	0.73	1.85	3.5	0.003	0.62	0.0	0.04	14.91	0.00	2.431	7.85	2.10	2.7	97.3	0.0	2.12	1.40	0.68	0.74	1.46	10062	1182	4	0	20	0	0	logfile
✔	9JA0	61286	2025-01-23	2024-08-23	3.14	3.38	3.16	3.4	0.003	0.67	0.0	0.04	11.92	0.01	1.961	8.89	0.00	2.8	97.2	0.0	-4.28	0.75	0.86	3.05	3.4	0.003	0.52	0.0	0.04	14.28	0.00	2.638	4.40	0.80	4.3	95.7	0.0	1.01	0.94	0.72	0.85	2.67	19716	2628	12	0	0	0	0	logfile
✔	9GK2	51414	2025-01-18	2024-08-23	2.5	3.25	2.53	2.9	0.004	0.74	8.0	0.04	19.42	0.01	2.075	9.60	4.15	4.1	95.6	0.3	1.13	0.61	0.68	1.58	3.0	0.003	0.62	0.0	0.04	19.11	0.00	2.438	6.53	3.67	3.4	96.4	0.2	2.49	0.91	0.60	0.70	1.46	60516	7776	18	0	0	0	0	logfile
✔	9GK2	51414	2024-10-12	2024-08-23	2.5	3.25	2.53	2.9	0.004	0.74	8.0	0.04	19.42	0.01	2.075	9.60	4.15	4.1	95.6	0.3	1.13	0.61	0.68	1.58	3.0	0.004	0.70	0.0	0.04	19.00	0.00	2.367	7.78	3.54	3.5	96.3	0.2	1.75	0.94	0.60	0.71	1.56	60516	7776	18	0	0	0	0	logfile
✔	9GK2	51414	2024-12-30	2024-08-23	2.5	3.25	2.53	2.9	0.004	0.74	8.0	0.04	19.42	0.01	2.075	9.60	4.15	4.1	95.6	0.3	1.13	0.61	0.68	1.58	3.0	0.004	0.70	0.0	0.04	19.00	0.00	2.367	7.78	3.54	3.5	96.3	0.2	1.75	0.94	0.60	0.71	1.56	60516	7776	18	0	0	0	0	logfile
✔	9DAX	46701	2025-06-05	2024-08-22	3.3	3.53	3.10	3.6	0.010	1.23	3.0	0.07	17.64	0.01	0.912	17.62	0.72	4.5	95.1	0.4	-2.15	0.60	0.66	2.32	3.5	0.006	1.16	1.0	0.06	17.68	0.01	1.885	15.87	3.02	6.6	93.3	0.1	-2.15	1.34	0.61	0.69	1.74	6401	825	4	0	7	6	0	logfile
✔	9J97	61254	2025-06-05	2024-08-22	3.3	3.54	3.13	3.6	0.014	1.86	15.0	0.09	19.36	0.01	2.155	12.71	12.25	6.8	92.2	0.9	-4.11	0.68	0.86	2.08	3.6	0.003	0.63	0.0	0.04	16.75	0.00	2.613	4.46	4.76	4.7	95.3	0.0	0.34	0.45	0.58	0.82	2.77	6704	786	4	0	6	0	0	logfile
✔	9GJU	51403	2025-05-21	2024-08-22	2.8	2.29	—	2.7	0.002	0.47	0.0	0.04	15.98	0.00	1.865	5.75	0.95	1.5	98.4	0.1	1.92	0.85	0.84	2.69	2.7	0.002	0.53	0.0	0.04	16.71	0.00	2.000	4.79	2.07	1.3	98.6	0.1	2.33	0.93	0.86	0.87	2.88	20935	2540	8	21	4	0	0	logfile
✔	9GJU	51403	2025-06-18	2024-08-22	2.8	2.29	—	2.7	0.002	0.47	0.0	0.04	15.98	0.00	1.865	5.75	0.95	1.5	98.4	0.1	1.92	0.85	0.84	2.69	2.7	0.004	0.55	0.0	0.04	16.77	0.00	1.953	4.67	2.24	1.4	98.5	0.1	2.24	1.22	0.86	0.88	3.06	20935	2540	8	21	4	0	0	logfile
✔	9J98	61255	2025-06-05	2024-08-22	3.33	3.60	3.39	3.6	0.010	1.10	12.0	0.07	19.13	0.02	2.236	14.07	8.66	10.3	89.4	0.3	-3.04	0.60	0.84	1.66	3.6	0.003	0.59	0.0	0.04	16.70	0.00	2.613	7.22	5.68	7.8	92.2	0.0	0.93	0.50	0.57	0.83	1.74	6752	794	4	0	4	0	0	logfile
✔	9J98	61255	2025-04-28	2024-08-22	3.33	3.60	3.39	3.6	0.010	1.10	12.0	0.07	19.13	0.02	2.236	14.07	8.66	10.3	89.4	0.3	-3.04	0.60	0.84	1.66	3.6	0.003	0.59	0.0	0.04	16.70	0.00	2.613	7.22	5.68	7.8	92.2	0.0	0.93	0.50	0.57	0.83	1.74	6752	794	4	0	4	0	0	logfile
✔	9DAK	46691	2025-05-11	2024-08-22	2.4	2.74	2.43	2.6	0.014	1.29	0.0	0.09	13.17	0.00	1.935	1.68	0.47	1.5	98.5	0.0	0.51	0.78	0.84	4.93	2.6	0.003	0.68	0.0	0.05	14.17	0.00	2.262	2.49	1.25	1.0	99.0	0.0	2.11	0.46	0.72	0.84	4.08	7303	899	13	0	23	144	0	logfile
✔	9J98	61255	2025-05-10	2024-08-22	3.33	3.60	3.39	3.6	0.010	1.10	12.0	0.07	19.13	0.02	2.236	14.07	8.66	10.3	89.4	0.3	-3.04	0.60	0.84	1.66	3.6	0.003	0.58	0.0	0.04	16.70	0.00	2.633	7.22	6.68	7.6	92.2	0.1	0.90	0.49	0.57	0.83	1.74	6752	794	4	0	4	0	0	logfile
✔	9DAK	46691	2025-06-06	2024-08-22	2.4	2.74	2.43	2.6	0.014	1.29	0.0	0.09	13.17	0.00	1.935	1.68	0.47	1.5	98.5	0.0	0.51	0.78	0.84	4.93	2.6	0.003	0.68	0.0	0.05	14.12	0.00	2.327	1.90	0.78	1.1	98.9	0.0	1.95	0.45	0.74	0.85	4.33	7303	899	13	0	23	144	0	logfile
✔	9J97	61254	2025-05-10	2024-08-22	3.3	3.54	3.13	3.6	0.014	1.86	15.0	0.09	19.36	0.01	2.155	12.71	12.25	6.8	92.2	0.9	-4.11	0.68	0.86	2.08	3.6	0.003	0.62	0.0	0.04	16.73	0.00	2.590	4.01	4.61	4.3	95.7	0.0	0.34	0.45	0.59	0.82	2.54	6704	786	4	0	6	0	0	logfile
✔	9J97	61254	2025-04-28	2024-08-22	3.3	3.54	3.13	3.6	0.014	1.86	15.0	0.09	19.36	0.01	2.155	12.71	12.25	6.8	92.2	0.9	-4.11	0.68	0.86	2.08	3.6	0.003	0.63	0.0	0.04	16.75	0.00	2.613	4.46	4.76	4.7	95.3	0.0	0.34	0.45	0.58	0.82	2.77	6704	786	4	0	6	0	0	logfile
✔	9DAK	46691	2025-03-12	2024-08-22	2.4	2.74	2.43	2.6	0.011	1.22	0.0	0.09	13.17	0.00	1.935	1.68	0.47	1.5	98.5	0.0	0.51	0.78	0.84	4.93	2.6	0.003	0.64	0.0	0.04	14.22	0.00	2.278	2.78	0.94	1.0	99.0	0.0	2.01	0.47	0.71	0.83	4.09	7303	899	13	0	23	144	0	logfile

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