Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9DAo	46695	2025-06-08	2024-08-22	2.8	3.05	2.81	3.1	0.008	0.97	0.0	0.05	16.57	0.01	1.978	6.22	2.59	4.5	95.4	0.2	-0.40	0.66	0.82	3.69	3.1	0.004	0.69	0.0	0.05	16.69	0.01	1.998	5.13	2.96	4.5	95.4	0.2	-0.42	0.33	0.68	0.85	3.94	9804	1264	6	0	6	0	0	logfile
✔	9DAo	46695	2025-04-30	2024-08-22	2.8	3.05	2.81	3.1	0.008	0.97	0.0	0.05	16.57	0.01	1.978	6.22	2.59	4.5	95.4	0.2	-0.40	0.66	0.82	3.69	3.1	0.004	0.69	0.0	0.05	16.69	0.01	1.998	5.13	2.96	4.5	95.4	0.2	-0.42	0.33	0.68	0.85	3.94	9804	1264	6	0	6	0	0	logfile
✘	9DAo	46695	2025-05-13	2024-08-22	2.8	3.05	2.81	3.1	0.008	0.97	0.0	0.05	16.57	0.01	1.978	6.22	2.59	4.5	95.4	0.2	-0.40	0.66	0.82	3.69	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9804	1264	6	0	6	0	0	logfile
✔	9DAX	46701	2025-06-05	2024-08-22	3.3	3.53	3.10	3.6	0.010	1.23	3.0	0.07	17.64	0.01	0.912	17.62	0.72	4.5	95.1	0.4	-2.15	0.60	0.66	2.32	3.5	0.006	1.16	1.0	0.06	17.68	0.01	1.885	15.87	3.02	6.6	93.3	0.1	-2.15	1.34	0.61	0.69	1.74	6401	825	4	0	7	6	0	logfile
✔	9DAX	46701	2025-05-10	2024-08-22	3.3	3.53	3.10	3.6	0.010	1.23	3.0	0.07	17.64	0.01	0.912	17.62	0.72	4.5	95.1	0.4	-2.15	0.60	0.66	2.32	3.5	0.005	1.13	1.0	0.05	17.81	0.01	1.879	14.20	3.60	6.1	93.8	0.1	-2.07	1.34	0.62	0.67	1.77	6401	825	4	0	7	6	0	logfile
✔	9DAX	46701	2025-04-27	2024-08-22	3.3	3.53	3.10	3.6	0.010	1.23	3.0	0.07	17.64	0.01	0.912	17.62	0.72	4.5	95.1	0.4	-2.15	0.60	0.66	2.32	3.5	0.006	1.16	1.0	0.06	17.68	0.01	1.885	15.87	3.02	6.6	93.3	0.1	-2.15	1.34	0.61	0.69	1.74	6401	825	4	0	7	6	0	logfile
✔	9J8Z	61249	2025-06-07	2024-08-21	3.36	4.09	3.52	3.9	0.004	0.79	0.0	0.05	17.03	0.01	2.128	12.58	1.42	5.4	94.6	0.0	-0.36	0.66	0.79	1.74	3.9	0.003	0.67	0.0	0.04	16.99	0.00	2.404	6.68	4.70	4.5	95.5	0.0	0.39	0.90	0.70	0.84	1.69	8611	1121	5	0	0	0	0	logfile
✔	9J8Z	61249	2025-04-29	2024-08-21	3.36	4.09	3.52	3.9	0.004	0.79	0.0	0.05	17.03	0.01	2.128	12.58	1.42	5.4	94.6	0.0	-0.36	0.66	0.79	1.74	3.9	0.003	0.67	0.0	0.04	16.99	0.00	2.404	6.68	4.70	4.5	95.5	0.0	0.39	0.90	0.70	0.84	1.69	8611	1121	5	0	0	0	0	logfile
✔	9J8Z	61249	2025-05-12	2024-08-21	3.36	4.09	3.52	3.9	0.004	0.79	0.0	0.05	17.03	0.01	2.128	12.58	1.42	5.4	94.6	0.0	-0.36	0.66	0.79	1.74	3.9	0.003	0.67	0.0	0.04	16.91	0.00	2.420	6.74	4.49	4.1	95.9	0.0	0.44	1.22	0.70	0.84	1.60	8611	1121	5	0	0	0	0	logfile
✔	9J8B	61226	2025-06-04	2024-08-21	3.9	4.08	3.83	4.0	0.003	0.64	0.0	0.04	14.29	0.00	2.219	9.07	0.00	6.6	93.4	0.0	0.04	0.58	0.81	1.05	4.0	0.003	0.66	0.0	0.04	16.87	0.00	2.587	6.29	1.82	6.6	93.4	0.0	0.80	1.31	0.58	0.82	0.91	4158	524	1	0	0	0	0	logfile
✔	9J8B	61226	2025-05-09	2024-08-21	3.9	4.08	3.83	4.0	0.003	0.64	0.0	0.04	14.29	0.00	2.219	9.07	0.00	6.6	93.4	0.0	0.04	0.58	0.81	1.05	4.0	0.003	0.68	0.0	0.04	16.95	0.00	2.592	5.92	0.91	6.2	93.8	0.0	0.83	1.32	0.58	0.81	0.91	4158	524	1	0	0	0	0	logfile
✔	9J8B	61226	2025-04-27	2024-08-21	3.9	4.08	3.83	4.0	0.003	0.64	0.0	0.04	14.29	0.00	2.219	9.07	0.00	6.6	93.4	0.0	0.04	0.58	0.81	1.05	4.0	0.003	0.66	0.0	0.04	16.87	0.00	2.587	6.29	1.82	6.6	93.4	0.0	0.80	1.31	0.58	0.82	0.91	4158	524	1	0	0	0	0	logfile
✔	9J8o	61233	2025-05-28	2024-08-21	4.05	5.26	3.99	4.4	0.007	0.67	0.0	0.04	26.59	0.00	2.111	6.96	3.38	3.0	97.0	0.0	1.66	0.78	0.65	—	4.4	0.004	0.59	0.0	0.03	26.34	0.00	2.393	9.97	0.00	1.7	98.3	0.0	2.59	0.71	0.91	0.86	—	32116	2250	28	704	0	0	0	logfile
✔	9J8o	61233	2025-06-26	2024-08-21	4.05	5.26	3.99	4.4	0.007	0.67	0.0	0.04	26.59	0.00	2.111	6.96	3.38	3.0	97.0	0.0	1.66	0.78	0.65	—	4.4	0.004	0.60	0.0	0.03	26.47	0.00	2.375	10.25	0.00	1.9	98.1	0.0	2.55	0.73	0.90	0.86	—	32116	2250	28	704	0	0	0	logfile
✔	9J8C	61227	2025-06-04	2024-08-21	2.9	3.01	2.81	3.1	0.003	0.67	0.0	0.05	15.96	0.00	2.275	6.00	0.00	2.6	97.4	0.0	1.43	0.60	0.86	2.38	3.1	0.002	0.50	0.0	0.04	16.43	0.00	2.331	3.28	1.75	2.2	97.6	0.2	2.40	0.32	0.66	0.89	2.02	4418	543	3	0	6	14	0	logfile
✔	9J8C	61227	2025-04-27	2024-08-21	2.9	3.01	2.81	3.1	0.003	0.67	0.0	0.05	15.96	0.00	2.275	6.00	0.00	2.6	97.4	0.0	1.43	0.60	0.86	2.38	3.1	0.002	0.50	0.0	0.04	16.43	0.00	2.331	3.28	1.75	2.2	97.6	0.2	2.40	0.32	0.66	0.89	2.02	4418	543	3	0	6	14	0	logfile
✔	9J8C	61227	2025-05-10	2024-08-21	2.9	3.01	2.81	3.1	0.003	0.67	0.0	0.05	15.96	0.00	2.275	6.00	0.00	2.6	97.4	0.0	1.43	0.60	0.86	2.38	3.1	0.003	0.52	0.0	0.04	16.42	0.00	2.298	3.28	1.97	2.6	97.2	0.2	2.26	0.26	0.66	0.89	2.30	4418	543	3	0	6	14	0	logfile
✔	9J8P	61237	2025-05-10	2024-08-21	3.21	3.65	—	1.5	0.007	0.90	0.0	0.05	20.97	0.01	2.235	10.53	0.00	5.4	94.6	0.0	-0.46	0.92	0.83	1.79	1.5	0.004	0.76	0.0	0.04	21.64	0.00	2.314	13.14	2.13	4.1	95.9	0.0	0.19	2.59	0.93	0.87	1.34	7061	623	3	106	1	0	0	logfile
✔	9J8P	61237	2025-06-05	2024-08-21	3.21	3.65	—	1.5	0.007	0.90	0.0	0.05	20.97	0.01	2.235	10.53	0.00	5.4	94.6	0.0	-0.46	0.92	0.83	1.79	1.5	0.003	0.72	0.0	0.04	21.59	0.00	2.339	12.29	1.35	3.9	96.1	0.0	0.24	2.59	0.93	0.86	1.50	7061	623	3	106	1	0	0	logfile
✔	9D98	46670	2025-06-16	2024-08-21	4.19	4.40	4.15	4.4	0.005	1.08	0.0	0.06	15.31	0.01	2.288	5.01	0.15	6.0	93.8	0.3	-2.03	0.66	0.75	—	4.4	0.003	0.73	0.0	0.05	14.41	0.00	2.380	10.39	0.10	6.8	93.0	0.2	-1.42	1.25	0.69	0.75	—	19100	2441	18	0	15	0	0	logfile

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