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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8ZW8 | 60519 | 2024-12-29 | 2024-06-12 | 3.05 | 3.27 | 3.06 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 16.41 | 0.00 | 2.140 | 9.12 | 0.65 | 3.8 | 96.2 | 0.0 | 1.59 | 0.63 | 0.82 | 1.79 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 16.57 | 0.00 | 2.535 | 6.26 | 3.50 | 4.0 | 96.0 | 0.0 | 1.80 | 0.25 | 0.61 | 0.81 | 2.38 | 11652 | 1491 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZW8 | 60519 | 2025-01-18 | 2024-06-12 | 3.05 | 3.27 | 3.06 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 16.41 | 0.00 | 2.140 | 9.12 | 0.65 | 3.8 | 96.2 | 0.0 | 1.59 | 0.63 | 0.82 | 1.79 | 3.3 | 0.005 | 0.61 | 0.0 | 0.04 | 16.60 | 0.00 | 2.550 | 7.16 | 3.33 | 4.1 | 95.9 | 0.0 | 1.70 | 0.24 | 0.64 | 0.83 | 2.27 | 11652 | 1491 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2025-01-14 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.62 | 0.0 | 0.04 | 17.57 | 0.00 | 2.540 | 10.83 | 5.96 | 9.4 | 90.6 | 0.0 | -0.65 | 0.31 | 0.69 | 0.83 | 2.00 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2025-03-12 | 2024-06-11 | 3.65 | 4.10 | 3.62 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.63 | 0.0 | 0.04 | 17.53 | 0.00 | 2.539 | 10.38 | 5.96 | 9.6 | 90.4 | 0.0 | -0.60 | 0.31 | 0.69 | 0.83 | 1.94 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2025-04-28 | 2024-06-11 | 3.65 | 4.10 | 3.62 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.63 | 0.0 | 0.04 | 17.50 | 0.00 | 2.541 | 10.08 | 5.52 | 9.2 | 90.8 | 0.0 | -0.52 | 0.32 | 0.69 | 0.83 | 2.08 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-09-24 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-10-10 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-11-14 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2024-12-27 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.64 | 0.0 | 0.04 | 17.45 | 0.00 | 2.539 | 10.31 | 5.23 | 9.3 | 90.7 | 0.0 | -0.45 | 0.30 | 0.69 | 0.83 | 1.95 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9C7U | 45294 | 2025-02-12 | 2024-06-11 | 3.65 | 4.10 | 3.63 | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.99 | 0.00 | 2.138 | 11.43 | 0.29 | 9.2 | 90.8 | 0.0 | -0.72 | 0.71 | 0.83 | 2.04 | 4.0 | 0.004 | 0.62 | 0.0 | 0.04 | 17.57 | 0.00 | 2.540 | 10.83 | 5.96 | 9.4 | 90.6 | 0.0 | -0.65 | 0.31 | 0.69 | 0.83 | 2.00 | 6848 | 896 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8ZVQ | 60512 | 2025-04-29 | 2024-06-11 | 3.4 | 3.70 | 3.47 | 3.7 | 0.005 | 1.03 | 0.0 | 0.05 | 18.07 | 0.01 | 1.532 | 10.98 | 0.63 | 5.5 | 94.5 | 0.0 | -2.26 | 0.53 | 0.59 | 0.15 | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 18.49 | 0.00 | 2.504 | 12.51 | 5.45 | 6.2 | 93.8 | 0.0 | -0.70 | 1.18 | 0.52 | 0.61 | 0.30 | 8896 | 1152 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2025-04-27 | 2024-06-11 | 2.9 | 2.55 | 2.79 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.004 | 0.89 | 0.0 | 0.04 | 17.53 | 0.00 | 2.621 | 2.01 | 1.56 | 7.5 | 92.5 | 0.0 | -4.72 | 1.98 | 0.51 | 0.89 | 5.51 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2025-01-13 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 0.98 | 0.0 | 0.05 | 17.69 | 0.00 | 2.593 | 1.76 | 1.56 | 7.8 | 92.2 | 0.0 | -4.69 | 1.98 | 0.51 | 0.89 | 5.50 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2025-02-11 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 0.98 | 0.0 | 0.05 | 17.69 | 0.00 | 2.593 | 1.76 | 1.56 | 7.8 | 92.2 | 0.0 | -4.69 | 1.98 | 0.51 | 0.89 | 5.50 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-10-09 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-11-14 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-12-27 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-09-23 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.006 | 1.03 | 0.0 | 0.05 | 17.52 | 0.00 | 2.580 | 2.89 | 2.60 | 7.6 | 92.4 | 0.0 | -4.73 | 1.98 | 0.51 | 0.90 | 5.61 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2024-08-02 | 2024-06-11 | 2.9 | 2.55 | 2.80 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.005 | 0.96 | 0.0 | 0.05 | 17.66 | 0.00 | 2.577 | 2.26 | 2.34 | 8.9 | 91.1 | 0.0 | -4.75 | 1.98 | 0.51 | 0.89 | 5.37 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FoF | 50621 | 2025-03-06 | 2024-06-11 | 2.9 | 2.55 | 2.79 | 3.2 | 0.011 | 1.53 | 6.0 | 0.08 | 13.93 | 0.01 | 2.332 | 9.79 | 1.56 | 4.2 | 94.8 | 1.0 | -4.04 | 0.27 | 0.57 | 3.42 | 2.8 | 0.004 | 0.89 | 0.0 | 0.04 | 17.53 | 0.00 | 2.621 | 2.01 | 1.56 | 7.5 | 92.5 | 0.0 | -4.72 | 1.98 | 0.51 | 0.89 | 5.51 | 4176 | 600 | 12 | 0 | 0 | 0 | 0 | logfile |