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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UTT | 42549 | 2025-05-23 | 2023-10-31 | 3.1 | 2.46 | 3.18 | 3.3 | 0.007 | 0.96 | 0.0 | 0.06 | 19.18 | 0.01 | 1.190 | 6.78 | 1.60 | 5.3 | 94.3 | 0.4 | -0.45 | 0.60 | 0.84 | 2.90 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 17.20 | 0.01 | 1.949 | 5.37 | 2.07 | 3.9 | 96.0 | 0.1 | 1.05 | 0.55 | 0.60 | 0.85 | 2.40 | 23744 | 2974 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8UTT | 42549 | 2025-01-25 | 2023-10-31 | 3.1 | 2.46 | 3.19 | 3.3 | 0.007 | 0.96 | 0.0 | 0.06 | 19.18 | 0.01 | 1.190 | 6.78 | 1.60 | 5.3 | 94.3 | 0.4 | -0.45 | 0.60 | 0.84 | 2.90 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 17.20 | 0.01 | 1.949 | 5.37 | 2.07 | 3.9 | 96.0 | 0.1 | 1.05 | 0.55 | 0.60 | 0.85 | 2.40 | 23744 | 2974 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8UTR | 42547 | 2025-02-14 | 2023-10-31 | 3.3 | 2.47 | 3.29 | 3.4 | 0.004 | 0.78 | 0.0 | 0.05 | 18.17 | 0.01 | 1.777 | 3.27 | 0.66 | 4.2 | 95.6 | 0.2 | 0.03 | 0.59 | 0.84 | 3.09 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 17.19 | 0.00 | 1.977 | 5.24 | 1.80 | 3.8 | 96.2 | 0.0 | 0.73 | 0.47 | 0.60 | 0.85 | 2.77 | 9792 | 1230 | 7 | 1 | 4 | 0 | 0 | logfile |
✔ | 8UTR | 42547 | 2025-05-13 | 2023-10-31 | 3.3 | 2.47 | 3.29 | 3.4 | 0.004 | 0.78 | 0.0 | 0.05 | 18.17 | 0.01 | 1.777 | 3.27 | 0.66 | 4.2 | 95.6 | 0.2 | 0.03 | 0.59 | 0.84 | 3.09 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 17.19 | 0.00 | 1.977 | 5.24 | 1.80 | 3.8 | 96.2 | 0.0 | 0.73 | 0.47 | 0.60 | 0.85 | 2.77 | 9792 | 1230 | 7 | 1 | 4 | 0 | 0 | logfile |
✔ | 8UTR | 42547 | 2025-04-30 | 2023-10-31 | 3.3 | 2.47 | 3.29 | 3.4 | 0.004 | 0.78 | 0.0 | 0.05 | 18.17 | 0.01 | 1.777 | 3.27 | 0.66 | 4.2 | 95.6 | 0.2 | 0.03 | 0.59 | 0.84 | 3.09 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 17.02 | 0.00 | 1.988 | 5.08 | 1.70 | 3.8 | 96.2 | 0.0 | 0.85 | 0.46 | 0.60 | 0.85 | 2.81 | 9792 | 1230 | 7 | 1 | 4 | 0 | 0 | logfile |
✔ | 8UTR | 42547 | 2025-06-08 | 2023-10-31 | 3.3 | 2.47 | 3.29 | 3.4 | 0.004 | 0.78 | 0.0 | 0.05 | 18.17 | 0.01 | 1.777 | 3.27 | 0.66 | 4.2 | 95.6 | 0.2 | 0.03 | 0.59 | 0.84 | 3.09 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 17.02 | 0.00 | 1.988 | 5.08 | 1.70 | 3.8 | 96.2 | 0.0 | 0.85 | 0.46 | 0.60 | 0.85 | 2.81 | 9792 | 1230 | 7 | 1 | 4 | 0 | 0 | logfile |
✔ | 8UTR | 42547 | 2025-07-28 | 2023-10-31 | 3.3 | 2.47 | 3.29 | 3.4 | 0.004 | 0.78 | 0.0 | 0.05 | 18.17 | 0.01 | 1.777 | 3.27 | 0.66 | 4.2 | 95.6 | 0.2 | 0.03 | 0.59 | 0.84 | 3.09 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 17.02 | 0.00 | 1.988 | 5.08 | 1.70 | 3.8 | 96.2 | 0.0 | 0.85 | 0.46 | 0.60 | 0.85 | 2.81 | 9792 | 1230 | 7 | 1 | 4 | 0 | 0 | logfile |
✔ | 8UTF | 42539 | 2024-12-29 | 2023-10-31 | 2.73 | 2.99 | 2.86 | 2.9 | 0.003 | 0.45 | 0.0 | 0.04 | 16.15 | 0.00 | 2.222 | 3.02 | 0.00 | 1.5 | 98.5 | 0.0 | 0.28 | 0.69 | 0.81 | 3.67 | 2.9 | 0.004 | 0.59 | 0.0 | 0.05 | 15.98 | 0.00 | 2.491 | 3.53 | 2.24 | 1.5 | 98.5 | 0.0 | 1.36 | 1.46 | 0.77 | 0.86 | 2.95 | 9827 | 1248 | 15 | 0 | 9 | 134 | 0 | logfile |
✔ | 8UTF | 42539 | 2024-11-15 | 2023-10-31 | 2.73 | 2.99 | 2.86 | 2.9 | 0.003 | 0.45 | 0.0 | 0.04 | 16.15 | 0.00 | 2.222 | 3.02 | 0.00 | 1.5 | 98.5 | 0.0 | 0.28 | 0.69 | 0.81 | 3.67 | 2.9 | 0.004 | 0.59 | 0.0 | 0.05 | 15.98 | 0.00 | 2.491 | 3.53 | 2.24 | 1.5 | 98.5 | 0.0 | 1.36 | 1.46 | 0.77 | 0.86 | 2.95 | 9827 | 1248 | 15 | 0 | 9 | 134 | 0 | logfile |
✔ | 8UTF | 42539 | 2025-08-23 | 2023-10-31 | 2.73 | 2.99 | 2.86 | 2.9 | 0.003 | 0.46 | 0.0 | 0.04 | 16.15 | 0.00 | 2.222 | 3.02 | 0.00 | 1.5 | 98.5 | 0.0 | 0.28 | 0.69 | 0.81 | 3.67 | 2.9 | 0.005 | 0.65 | 0.0 | 0.05 | 16.22 | 0.00 | 2.587 | 3.79 | 2.24 | 1.7 | 98.3 | 0.0 | 1.24 | 1.47 | 0.77 | 0.86 | 2.87 | 9827 | 1248 | 15 | 0 | 9 | 134 | 0 | logfile |
✔ | 8UTF | 42539 | 2025-07-28 | 2023-10-31 | 2.73 | 2.99 | 2.86 | 2.9 | 0.003 | 0.46 | 0.0 | 0.04 | 16.15 | 0.00 | 2.222 | 3.02 | 0.00 | 1.5 | 98.5 | 0.0 | 0.28 | 0.69 | 0.81 | 3.67 | 2.9 | 0.004 | 0.62 | 0.0 | 0.05 | 16.18 | 0.00 | 2.513 | 3.53 | 2.43 | 1.6 | 98.4 | 0.0 | 1.35 | 1.47 | 0.77 | 0.86 | 2.87 | 9827 | 1248 | 15 | 0 | 9 | 134 | 0 | logfile |
✔ | 8UTF | 42539 | 2025-06-08 | 2023-10-31 | 2.73 | 2.99 | 2.86 | 2.9 | 0.003 | 0.46 | 0.0 | 0.04 | 16.15 | 0.00 | 2.222 | 3.02 | 0.00 | 1.5 | 98.5 | 0.0 | 0.28 | 0.69 | 0.81 | 3.67 | 2.9 | 0.004 | 0.62 | 0.0 | 0.05 | 16.18 | 0.00 | 2.513 | 3.53 | 2.43 | 1.6 | 98.4 | 0.0 | 1.35 | 1.47 | 0.77 | 0.86 | 2.87 | 9827 | 1248 | 15 | 0 | 9 | 134 | 0 | logfile |
✔ | 8UTF | 42539 | 2025-05-13 | 2023-10-31 | 2.73 | 2.99 | 2.86 | 2.9 | 0.003 | 0.46 | 0.0 | 0.04 | 16.15 | 0.00 | 2.222 | 3.02 | 0.00 | 1.5 | 98.5 | 0.0 | 0.28 | 0.69 | 0.81 | 3.67 | 2.9 | 0.004 | 0.58 | 0.0 | 0.04 | 16.08 | 0.00 | 2.557 | 3.53 | 1.68 | 1.5 | 98.5 | 0.0 | 1.50 | 1.47 | 0.77 | 0.86 | 2.90 | 9827 | 1248 | 15 | 0 | 9 | 134 | 0 | logfile |
✔ | 8UTP | 42545 | 2025-05-23 | 2023-10-31 | 3.2 | 2.45 | 3.19 | 3.3 | 0.005 | 0.85 | 1.0 | 0.05 | 18.53 | 0.01 | 1.930 | 4.23 | 0.94 | 4.2 | 95.4 | 0.4 | -0.04 | 0.65 | 0.85 | 3.10 | 3.3 | 0.006 | 0.66 | 0.0 | 0.05 | 17.29 | 0.00 | 1.873 | 4.85 | 2.54 | 4.1 | 95.8 | 0.1 | 0.80 | 1.73 | 0.65 | 0.86 | 2.89 | 23792 | 2982 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8UTP | 42545 | 2025-06-20 | 2023-10-31 | 3.2 | 2.45 | 3.19 | 3.3 | 0.005 | 0.85 | 1.0 | 0.05 | 18.53 | 0.01 | 1.930 | 4.23 | 0.94 | 4.2 | 95.4 | 0.4 | -0.04 | 0.65 | 0.85 | 3.10 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 17.31 | 0.00 | 1.894 | 4.68 | 2.69 | 3.7 | 96.2 | 0.1 | 0.93 | 1.73 | 0.65 | 0.85 | 2.80 | 23792 | 2982 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8UTP | 42545 | 2025-08-24 | 2023-10-31 | 3.2 | 2.45 | 3.19 | 3.3 | 0.005 | 0.85 | 1.0 | 0.05 | 18.53 | 0.01 | 1.930 | 4.23 | 0.94 | 4.2 | 95.4 | 0.4 | -0.04 | 0.65 | 0.85 | 3.10 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 17.22 | 0.00 | 1.892 | 5.08 | 2.69 | 3.8 | 96.1 | 0.1 | 0.84 | 1.73 | 0.65 | 0.85 | 2.82 | 23792 | 2982 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8UTP | 42545 | 2025-01-25 | 2023-10-31 | 3.2 | 2.45 | 3.19 | 3.3 | 0.005 | 0.85 | 1.0 | 0.05 | 18.53 | 0.01 | 1.930 | 4.23 | 0.94 | 4.2 | 95.4 | 0.4 | -0.04 | 0.65 | 0.85 | 3.10 | 3.3 | 0.006 | 0.66 | 0.0 | 0.05 | 17.29 | 0.00 | 1.873 | 4.85 | 2.54 | 4.1 | 95.8 | 0.1 | 0.80 | 1.73 | 0.65 | 0.86 | 2.89 | 23792 | 2982 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8R0T | 18803 | 2025-08-23 | 2023-10-31 | 3.9 | 4.57 | 3.97 | 4.2 | 0.005 | 1.10 | 9.0 | 0.07 | 15.94 | 0.01 | 1.670 | 27.60 | 6.85 | 7.6 | 92.4 | 0.0 | -2.77 | 0.72 | 0.50 | 0.28 | 4.2 | 0.004 | 0.92 | 0.0 | 0.05 | 15.88 | 0.01 | 2.250 | 16.48 | 3.71 | 9.4 | 90.6 | 0.1 | -2.92 | 1.07 | 0.82 | 0.67 | 0.36 | 11461 | 1534 | 8 | 0 | 11 | 0 | 0 | logfile |
✘ | 8R0P | 18800 | 2025-06-10 | 2023-10-31 | 2.44 | 2.81 | 2.45 | 2.8 | 0.012 | 1.75 | 6.0 | 0.08 | 13.76 | 0.02 | 2.132 | 7.91 | 6.64 | 3.9 | 96.1 | 0.0 | -3.40 | 0.66 | 0.86 | 4.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11154 | 1410 | 15 | 0 | 40 | 155 | 0 | logfile |
✔ | 8R0K | 18795 | 2025-08-23 | 2023-10-31 | 2.94 | 3.38 | 2.97 | 3.3 | 0.011 | 1.38 | 0.0 | 0.06 | 9.92 | 0.01 | 2.394 | 11.43 | 1.35 | 2.7 | 97.3 | 0.0 | -2.38 | 0.66 | 0.89 | 5.44 | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 11.82 | 0.00 | 2.572 | 3.97 | 1.35 | 1.8 | 98.2 | 0.0 | 3.70 | 0.42 | 0.58 | 0.85 | 3.73 | 9885 | 1300 | 15 | 0 | 20 | 17 | 0 | logfile |