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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8WVU | 37869 | 2025-02-13 | 2023-10-24 | 3.61 | 2.50 | — | 2.3 | 0.012 | 1.32 | 3.0 | 0.06 | 8.44 | 0.01 | 1.989 | 17.55 | 2.68 | 6.0 | 94.0 | 0.0 | -1.23 | 0.71 | 0.62 | 2.88 | 2.2 | 0.003 | 0.68 | 0.0 | 0.04 | 14.36 | 0.01 | 2.533 | 6.07 | 2.55 | 5.3 | 94.7 | 0.0 | -1.02 | 1.85 | 0.75 | 0.74 | 2.34 | 7427 | 972 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-04-27 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 18.69 | 0.00 | 2.601 | 11.65 | 4.98 | 5.0 | 95.0 | 0.0 | -4.79 | 3.43 | 0.54 | 0.77 | 2.72 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2024-12-27 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.006 | 0.92 | 0.0 | 0.04 | 18.74 | 0.00 | 2.560 | 14.73 | 4.41 | 6.1 | 93.9 | 0.0 | -4.89 | 3.44 | 0.54 | 0.78 | 2.55 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2024-11-14 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.006 | 0.92 | 0.0 | 0.04 | 18.74 | 0.00 | 2.560 | 14.73 | 4.41 | 6.1 | 93.9 | 0.0 | -4.89 | 3.44 | 0.54 | 0.78 | 2.55 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-05-10 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.87 | 0.0 | 0.04 | 18.50 | 0.00 | 2.609 | 8.30 | 4.41 | 4.5 | 95.5 | 0.0 | -4.74 | 3.43 | 0.53 | 0.77 | 2.40 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-08-22 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.1 | 0.003 | 0.82 | 0.0 | 0.04 | 18.37 | 0.00 | 2.618 | 8.48 | 4.79 | 3.2 | 96.8 | 0.0 | -4.46 | 2.50 | 0.53 | 0.77 | 2.08 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-07-24 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 18.69 | 0.00 | 2.601 | 11.65 | 4.98 | 5.0 | 95.0 | 0.0 | -4.79 | 3.43 | 0.54 | 0.77 | 2.72 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-06-05 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 18.69 | 0.00 | 2.601 | 11.65 | 4.98 | 5.0 | 95.0 | 0.0 | -4.79 | 3.43 | 0.54 | 0.77 | 2.72 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-01-14 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.87 | 0.0 | 0.04 | 18.50 | 0.00 | 2.609 | 8.30 | 4.41 | 4.5 | 95.5 | 0.0 | -4.74 | 3.43 | 0.53 | 0.77 | 2.40 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-02-11 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.87 | 0.0 | 0.04 | 18.50 | 0.00 | 2.609 | 8.30 | 4.41 | 4.5 | 95.5 | 0.0 | -4.74 | 3.43 | 0.53 | 0.77 | 2.40 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2024-02-13 | 2023-10-24 | 3.86 | 3.89 | 3.45 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 1.26 | 1.0 | 0.04 | 18.38 | 0.00 | 2.084 | 19.76 | 4.41 | 4.1 | 95.9 | 0.0 | -5.05 | 3.44 | 0.53 | 0.77 | 2.41 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QXB | 18717 | 2025-03-06 | 2023-10-24 | 3.86 | 3.89 | 3.44 | 4.3 | 0.014 | 2.28 | 0.0 | 0.11 | 18.19 | 0.01 | 2.508 | 1.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.90 | 0.53 | 0.71 | 2.65 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 18.69 | 0.00 | 2.601 | 11.65 | 4.98 | 5.0 | 95.0 | 0.0 | -4.79 | 3.43 | 0.54 | 0.77 | 2.72 | 5544 | 810 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WW2 | 37881 | 2024-11-14 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.70 | 0.00 | 2.596 | 2.40 | 1.11 | 2.5 | 97.5 | 0.0 | 1.48 | 0.34 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-05-11 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.597 | 2.34 | 0.87 | 2.2 | 97.8 | 0.0 | 1.45 | 0.31 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-04-28 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 15.73 | 0.00 | 2.599 | 2.34 | 1.49 | 2.4 | 97.6 | 0.0 | 1.24 | 0.30 | 0.64 | 0.81 | 2.50 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-03-12 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 15.73 | 0.00 | 2.599 | 2.34 | 1.49 | 2.4 | 97.6 | 0.0 | 1.24 | 0.30 | 0.64 | 0.81 | 2.50 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-02-12 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.597 | 2.34 | 0.87 | 2.2 | 97.8 | 0.0 | 1.45 | 0.31 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8WW2 | 37881 | 2025-01-15 | 2023-10-24 | 2.79 | 3.00 | 2.84 | 3.1 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.15 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.1 | 0.002 | 0.52 | 0.0 | 0.04 | 15.76 | 0.00 | 2.597 | 2.34 | 0.87 | 2.2 | 97.8 | 0.0 | 1.45 | 0.31 | 0.64 | 0.81 | 2.39 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |
✔ | 8UQo | 42476 | 2025-01-22 | 2023-10-24 | 3.37 | 3.87 | 3.55 | 3.9 | 0.011 | 1.34 | 2.0 | 0.06 | 15.57 | 0.01 | 2.121 | 9.80 | 0.82 | 8.4 | 91.5 | 0.1 | -5.05 | 0.68 | 0.81 | 2.43 | 3.9 | 0.004 | 0.57 | 0.0 | 0.04 | 16.79 | 0.00 | 1.826 | 31.13 | 3.97 | 7.0 | 93.0 | 0.0 | -2.09 | 0.95 | 0.67 | 0.84 | 1.96 | 13961 | 1823 | 10 | 1 | 3 | 1 | 2 | logfile |
✔ | 8WW2 | 37881 | 2025-08-22 | 2023-10-24 | 2.79 | 3.00 | 2.83 | 3.0 | 0.004 | 0.71 | 0.0 | 0.05 | 13.76 | 0.00 | 1.809 | 4.09 | 0.00 | 3.5 | 96.5 | 0.0 | 0.09 | 0.66 | 0.80 | 2.96 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 15.79 | 0.00 | 2.597 | 2.40 | 0.87 | 2.5 | 97.5 | 0.0 | 1.31 | 0.31 | 0.64 | 0.81 | 2.53 | 7792 | 1020 | 6 | 0 | 3 | 2 | 0 | logfile |