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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8WD6 | 37455 | 2024-01-18 | 2023-09-14 | 2.87 | 3.11 | 2.89 | 3.2 | 0.003 | 0.56 | 1.0 | 0.04 | 16.49 | 0.00 | 2.431 | 5.56 | 0.12 | 2.7 | 97.3 | 0.0 | 1.60 | 0.57 | 0.77 | 1.54 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 17.54 | 0.00 | 2.100 | 6.18 | 3.35 | 4.1 | 95.9 | 0.0 | 1.22 | 1.19 | 0.57 | 0.79 | 1.64 | 7973 | 1025 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QJJ | 18448 | 2024-01-18 | 2023-09-13 | 3.35 | 3.35 | 3.18 | 3.3 | 0.012 | 1.98 | 0.0 | 0.10 | 12.60 | 0.01 | 2.538 | 0.43 | 0.00 | 2.3 | 97.7 | 0.0 | -2.06 | 0.33 | 0.77 | 5.23 | 3.3 | 0.002 | 0.56 | 0.0 | 0.05 | 15.85 | 0.00 | 2.175 | 5.69 | 2.27 | 2.5 | 97.5 | 0.0 | -1.82 | 2.32 | 0.33 | 0.79 | 4.27 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 8WC9 | 37435 | 2024-01-18 | 2023-09-11 | 3.2 | 3.47 | 3.29 | 3.5 | 0.007 | 0.91 | 3.0 | 0.06 | 13.76 | 0.01 | 2.205 | 9.72 | 1.16 | 5.5 | 94.5 | 0.0 | -0.70 | 0.65 | 0.83 | 3.84 | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 15.32 | 0.00 | 2.149 | 6.54 | 0.93 | 3.2 | 96.8 | 0.0 | 0.00 | 0.95 | 0.62 | 0.83 | 2.46 | 8394 | 1107 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8WC3 | 37429 | 2024-01-18 | 2023-09-11 | 3.0 | 3.02 | 2.90 | 3.0 | 0.007 | 0.95 | 2.0 | 0.07 | 13.95 | 0.01 | 1.356 | 8.37 | 1.40 | 5.2 | 94.8 | 0.0 | -1.08 | 0.66 | 0.73 | 2.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8418 | 1119 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8U4V | 41899 | 2024-01-17 | 2023-09-11 | 2.99 | 3.26 | 2.62 | 3.1 | 0.006 | 1.12 | 2.0 | 0.06 | 16.56 | 0.00 | 2.063 | 13.44 | 0.83 | 3.4 | 96.6 | 0.0 | 0.66 | 0.71 | 0.79 | 3.57 | 3.1 | 0.003 | 0.88 | 0.0 | 0.04 | 16.53 | 0.00 | 2.188 | 7.29 | 3.19 | 2.6 | 97.4 | 0.0 | 1.27 | 1.59 | 0.83 | 0.91 | 3.49 | 6637 | 862 | 8 | 0 | 1 | 3 | 0 | logfile |
✔ | 8WCA | 37436 | 2024-01-18 | 2023-09-11 | 3.48 | 3.71 | 3.50 | 3.7 | 0.006 | 0.87 | 5.0 | 0.06 | 13.52 | 0.01 | 2.105 | 10.04 | 0.89 | 4.3 | 95.7 | 0.0 | -0.41 | 0.66 | 0.74 | 1.96 | 3.7 | 0.004 | 0.61 | 0.0 | 0.04 | 15.00 | 0.00 | 2.072 | 8.64 | 2.67 | 4.1 | 95.9 | 0.0 | 0.17 | 0.36 | 0.68 | 0.79 | 1.22 | 8160 | 1110 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WCC | 37438 | 2024-01-17 | 2023-09-11 | 3.04 | 2.88 | 1.90 | 3.2 | 0.017 | 2.05 | 5.0 | 0.15 | 16.41 | 0.02 | 2.464 | 8.33 | 2.87 | 9.2 | 90.8 | 0.0 | -3.38 | 0.84 | 0.81 | 2.50 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.60 | 0.01 | 2.251 | 6.37 | 4.31 | 2.7 | 97.3 | 0.0 | 1.95 | 1.15 | 0.81 | 0.77 | 1.90 | 2056 | 270 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC8 | 37434 | 2024-01-18 | 2023-09-11 | 2.9 | 3.26 | 2.95 | 3.2 | 0.013 | 0.85 | 5.0 | 0.06 | 12.50 | 0.01 | 2.252 | 9.20 | 0.26 | 2.5 | 97.5 | 0.0 | 1.02 | 0.66 | 0.81 | 3.77 | 3.2 | 0.005 | 0.62 | 0.0 | 0.04 | 15.66 | 0.00 | 2.085 | 10.56 | 2.87 | 3.4 | 96.6 | 0.0 | 0.71 | 0.90 | 0.59 | 0.82 | 3.38 | 8062 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WCB | 37437 | 2024-01-18 | 2023-09-11 | 3.1 | 3.38 | 3.17 | 3.4 | 0.019 | 1.20 | 4.0 | 0.07 | 12.91 | 0.01 | 2.246 | 9.90 | 1.09 | 3.2 | 96.8 | 0.0 | -0.88 | 0.59 | 0.67 | 3.20 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 14.38 | 0.00 | 2.083 | 13.74 | 2.59 | 3.8 | 96.2 | 0.0 | -0.09 | 1.04 | 0.55 | 0.71 | 2.75 | 7784 | 1072 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC4 | 37430 | 2024-01-18 | 2023-09-11 | 3.1 | 3.34 | 3.05 | 3.3 | 0.006 | 0.81 | 2.0 | 0.06 | 12.94 | 0.01 | 2.216 | 7.71 | 0.93 | 4.4 | 95.6 | 0.0 | -0.26 | 0.69 | 0.85 | 3.75 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.00 | 0.00 | 2.198 | 4.77 | 1.63 | 3.0 | 97.0 | 0.0 | 0.61 | 0.93 | 0.72 | 0.88 | 2.89 | 8394 | 1110 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC5 | 37431 | 2024-01-18 | 2023-09-11 | 3.3 | 2.84 | 2.93 | 3.0 | 0.006 | 1.09 | 3.0 | 0.08 | 14.80 | 0.01 | 2.206 | 10.49 | 1.80 | 6.6 | 93.4 | 0.0 | -2.33 | 0.60 | 0.68 | 2.61 | 2.9 | 0.004 | 0.67 | 0.0 | 0.05 | 16.19 | 0.00 | 2.154 | 6.96 | 2.24 | 6.6 | 93.4 | 0.0 | -1.02 | 1.29 | 0.62 | 0.72 | 2.09 | 8511 | 1111 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC6 | 37432 | 2024-01-18 | 2023-09-11 | 3.2 | 3.26 | 3.10 | 3.3 | 0.008 | 0.99 | 2.0 | 0.07 | 13.34 | 0.01 | 2.130 | 8.47 | 1.10 | 5.1 | 94.9 | 0.0 | -0.22 | 0.72 | 0.84 | 3.41 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 14.94 | 0.00 | 2.248 | 4.46 | 1.21 | 4.8 | 95.2 | 0.0 | 0.20 | 0.96 | 0.72 | 0.87 | 2.97 | 9183 | 1241 | 7 | 0 | 1 | 0 | 0 | logfile |
✘ | 8WC7 | 37433 | 2024-01-18 | 2023-09-11 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8532 | 1122 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WBX | 37426 | 2024-01-18 | 2023-09-10 | 3.23 | 3.53 | 3.23 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 16.96 | 0.00 | 2.305 | 10.08 | 0.38 | 1.6 | 98.4 | 0.0 | 1.77 | 0.48 | 0.63 | 1.04 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 16.34 | 0.00 | 2.228 | 11.56 | 5.16 | 2.7 | 97.3 | 0.0 | 1.44 | 0.55 | 0.50 | 0.66 | 1.19 | 7331 | 934 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WBA | 37418 | 2024-01-18 | 2023-09-09 | 3.1 | 3.27 | 3.07 | 3.3 | 0.002 | 0.54 | 0.0 | 0.04 | 16.65 | 0.00 | 2.289 | 9.38 | 0.32 | 1.6 | 98.4 | 0.0 | 1.56 | 0.62 | 0.79 | 2.30 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.90 | 0.00 | 2.177 | 9.61 | 4.38 | 2.4 | 97.6 | 0.0 | 1.68 | 0.25 | 0.62 | 0.81 | 2.12 | 8646 | 1106 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 8QHP | 18415 | 2024-01-17 | 2023-09-08 | 2.8 | 3.49 | 2.82 | 3.3 | 0.002 | 0.38 | 0.0 | 0.04 | 11.64 | 0.00 | 2.176 | 6.09 | 0.00 | 1.0 | 99.0 | 0.0 | 1.77 | 0.76 | 0.86 | 4.14 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 14.74 | 0.00 | 2.182 | 7.06 | 0.98 | 1.2 | 98.8 | 0.0 | 2.54 | 0.85 | 0.74 | 0.84 | 3.33 | 6788 | 820 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8WAM | 37397 | 2024-01-18 | 2023-09-07 | 3.23 | 3.48 | 3.24 | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 17.90 | 0.00 | 2.211 | 5.64 | 0.11 | 1.7 | 98.3 | 0.0 | 1.70 | 0.60 | 0.77 | 1.11 | 3.5 | 0.002 | 0.52 | 0.0 | 0.04 | 17.76 | 0.00 | 2.029 | 5.99 | 2.25 | 2.2 | 97.8 | 0.0 | 1.17 | 0.40 | 0.59 | 0.78 | 1.15 | 8650 | 1102 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8U2C | 41845 | 2024-01-20 | 2023-09-05 | 2.5 | 2.75 | 2.49 | 2.9 | 0.012 | 1.88 | 5.0 | 0.10 | 13.83 | 0.02 | 2.543 | 0.27 | 1.85 | 4.1 | 95.6 | 0.3 | -1.26 | 0.75 | 0.80 | 3.98 | 2.9 | 0.003 | 0.72 | 0.0 | 0.04 | 16.40 | 0.00 | 2.185 | 8.18 | 2.69 | 3.5 | 96.4 | 0.1 | 0.82 | 1.27 | 0.75 | 0.83 | 2.38 | 15042 | 1948 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QFS | 18383 | 2024-01-20 | 2023-09-04 | 2.7 | 2.85 | 2.64 | 2.7 | 0.006 | 0.65 | 0.0 | 0.04 | 19.93 | 0.02 | 1.966 | 7.90 | 4.62 | 3.1 | 96.8 | 0.1 | 1.82 | 0.85 | 0.89 | 3.35 | 2.7 | 0.003 | 0.69 | 0.0 | 0.04 | 19.71 | 0.01 | 1.881 | 7.24 | 2.84 | 3.1 | 96.8 | 0.1 | 2.13 | 0.23 | 0.85 | 0.90 | 3.32 | 13294 | 1576 | 4 | 61 | 2 | 0 | 0 | logfile |
✔ | 8W8R | 37357 | 2024-01-18 | 2023-09-04 | 3.3 | 3.13 | 3.14 | 3.2 | 0.006 | 0.82 | 0.0 | 0.06 | 16.73 | 0.00 | 2.227 | 7.59 | 1.64 | 5.2 | 94.8 | 0.0 | -0.20 | 0.68 | 0.85 | 2.57 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 17.08 | 0.00 | 2.088 | 4.57 | 2.77 | 4.3 | 95.7 | 0.0 | 0.21 | 0.26 | 0.65 | 0.85 | 2.45 | 9018 | 1142 | 6 | 0 | 2 | 0 | 0 | logfile |