Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7ZXQ	15014	2024-02-14	2022-05-22	3.53	4.17	3.59	3.7	0.003	0.66	0.0	0.04	12.72	0.01	2.027	8.02	0.00	3.0	97.0	0.0	2.45	0.54	0.69	1.54	3.8	0.002	0.61	0.0	0.04	14.95	0.00	2.265	8.61	1.99	4.6	95.4	0.0	3.50	1.54	0.57	0.83	1.43	9930	1236	6	0	0	0	0	logfile
✔	7ZXT	15016	2024-02-14	2022-05-22	2.9	3.45	2.85	3.2	0.003	0.63	0.0	0.04	12.07	0.00	2.146	8.21	0.00	3.5	96.0	0.5	3.83	0.66	0.82	1.47	3.2	0.004	0.67	0.0	0.04	15.03	0.00	2.168	7.26	2.16	4.7	94.6	0.7	3.79	0.91	0.58	0.88	1.04	9924	1236	6	0	0	0	0	logfile
✔	8CXi	27058	2024-02-17	2022-05-21	3.4	3.96	3.26	3.9	0.008	0.97	5.0	0.09	14.27	0.01	0.857	26.16	3.00	9.6	89.7	0.7	-2.57	0.43	0.75	1.93	3.9	0.004	0.78	0.0	0.05	15.82	0.00	2.116	11.37	4.84	10.5	89.3	0.2	-1.30	1.23	0.29	0.73	1.54	16832	2196	12	0	8	0	0	logfile
✔	8CXM	27060	2024-02-13	2022-05-21	3.21	3.69	3.21	3.6	0.003	0.50	0.0	0.03	14.84	0.00	2.093	8.38	0.06	4.1	95.9	0.0	3.68	0.56	0.87	1.34	3.5	0.003	0.50	0.0	0.03	16.21	0.00	2.127	6.46	1.07	4.1	95.9	0.0	4.80	1.14	0.57	0.88	1.43	109560	14685	55	0	0	0	0	logfile
✔	7ZXo	15012	2024-02-17	2022-05-21	2.5	2.89	2.54	2.7	0.003	0.52	0.0	0.04	15.39	0.01	2.216	2.71	1.36	0.0	100.0	0.0	4.19	0.72	0.88	3.47	2.7	0.002	0.46	0.0	0.04	16.02	0.00	2.309	3.01	1.52	1.0	99.0	0.0	4.56	0.62	0.65	0.91	3.03	17016	2124	12	0	0	0	0	logfile
✔	7ZXN	15011	2024-02-18	2022-05-21	3.06	2.82	3.05	3.1	0.005	0.78	0.0	0.06	12.93	0.02	2.173	11.52	0.00	4.4	95.6	0.0	2.95	0.56	0.79	1.24	3.1	0.002	0.48	0.0	0.04	14.94	0.00	1.849	5.26	2.60	3.1	96.9	0.0	4.08	1.12	0.60	0.86	2.49	20466	1242	12	0	6	0	10278	logfile
✔	8CXG	27055	2024-02-17	2022-05-21	3.2	3.80	3.18	3.6	0.008	0.96	9.0	0.06	12.57	0.01	1.081	28.53	2.73	8.8	90.8	0.4	-2.16	0.46	0.72	1.89	3.6	0.006	0.92	1.0	0.05	15.49	0.01	2.157	13.66	4.90	10.4	89.5	0.1	-0.55	1.63	0.44	0.80	1.48	18381	2399	12	0	0	0	0	logfile
✔	8CXH	27056	2024-02-16	2022-05-21	3.2	3.54	2.91	3.4	0.008	0.90	5.0	0.06	13.14	0.01	0.938	26.23	2.74	9.6	90.0	0.4	-2.57	0.52	0.81	2.39	3.4	0.003	0.62	0.0	0.04	15.61	0.00	2.152	8.84	4.03	7.5	92.4	0.1	-0.85	1.20	0.50	0.85	2.05	16634	2178	10	0	0	0	0	logfile
✔	7ZX7	15006	2024-02-25	2022-05-20	3.4	4.37	3.42	3.0	0.004	0.52	0.0	0.04	17.07	0.00	1.385	9.44	0.00	3.0	97.0	0.0	1.17	0.88	0.76	0.98	3.0	0.006	0.75	0.0	0.04	18.10	0.00	1.931	18.80	1.44	4.1	95.9	0.0	0.82	2.27	0.91	0.85	1.46	49277	5789	32	132	12	0	0	logfile
✔	7ZXE	15009	2024-02-16	2022-05-20	3.5	4.20	3.49	3.6	0.003	0.55	0.0	0.04	19.34	0.00	1.978	8.64	0.00	3.4	96.6	0.0	0.71	0.76	0.76	1.21	3.7	0.003	0.68	0.0	0.04	20.65	0.00	2.067	13.71	1.72	4.0	96.0	0.0	0.97	1.25	0.78	0.81	1.32	14150	1500	11	93	2	0	0	logfile
✔	7ZX8	15007	2024-02-25	2022-05-20	3.0	3.43	3.02	3.0	0.005	0.61	0.0	0.04	17.02	0.00	1.635	8.49	0.15	4.0	96.0	0.0	0.47	0.84	0.80	2.23	3.0	0.006	0.75	0.0	0.05	18.19	0.00	1.880	13.91	1.60	3.9	96.1	0.0	0.44	1.35	0.87	0.86	2.36	49534	5841	32	126	12	0	0	logfile
✔	7XUR	33477	2024-02-13	2022-05-19	3.49	3.71	3.49	3.6	0.005	0.72	0.0	0.04	19.36	0.00	2.207	10.26	0.00	8.8	91.2	0.0	-2.26	0.77	0.78	2.19	3.6	0.003	0.56	0.0	0.04	20.18	0.00	2.159	8.59	1.11	5.4	94.6	0.0	-1.04	0.36	0.77	0.78	2.04	7749	814	6	48	2	0	0	logfile
✔	8CWY	27031	2024-02-24	2022-05-19	3.34	3.58	3.35	3.6	0.002	0.32	0.0	0.03	8.10	0.00	2.026	6.16	0.02	0.8	99.2	0.0	5.71	0.53	0.63	1.88	3.6	0.003	0.42	0.0	0.03	11.83	0.00	2.268	6.08	0.91	0.6	99.4	0.0	6.58	1.16	0.56	0.74	1.33	43620	6300	24	0	0	0	0	logfile
✔	7ZWH	14998	2024-02-23	2022-05-19	3.2	4.83	3.82	3.9	0.003	0.57	0.0	0.04	17.64	0.00	1.921	12.58	0.26	15.6	84.3	0.1	-2.45	0.59	0.73	0.63	3.9	0.003	0.59	0.0	0.04	17.03	0.00	1.859	15.35	2.82	14.1	85.8	0.1	-2.43	0.60	0.61	0.81	0.96	40231	2660	8	0	20	0	19501	logfile
✔	8CWM	27026	2024-02-18	2022-05-19	3.4	3.68	3.41	3.5	0.003	0.56	0.0	0.04	12.14	0.00	2.102	9.06	0.01	6.4	93.6	0.0	-3.89	0.65	0.84	3.75	3.5	0.003	0.64	0.0	0.05	14.42	0.00	2.072	10.68	3.58	5.2	94.8	0.0	-0.27	1.18	0.65	0.85	3.30	130980	17220	60	0	0	0	0	logfile
✔	7ZWA	14995	2024-02-14	2022-05-19	2.8	3.47	2.87	3.3	0.003	0.51	0.0	0.04	16.75	0.00	2.220	7.51	0.00	4.3	95.7	0.0	0.85	0.77	0.85	3.12	3.3	0.004	0.61	0.0	0.04	18.52	0.00	2.200	9.19	1.50	3.7	96.3	0.0	0.92	0.37	0.77	0.86	2.88	9038	1055	6	31	1	0	0	logfile
✔	8CWo	27028	2024-02-22	2022-05-19	2.84	3.21	2.87	3.0	0.006	0.63	0.0	0.04	23.03	0.02	1.853	9.10	1.76	6.0	92.9	1.1	-0.26	0.83	0.89	2.89	3.0	0.006	0.68	0.0	0.04	23.04	0.01	1.884	10.29	3.35	6.5	93.1	0.3	0.13	3.56	0.82	0.90	2.30	34342	1508	16	1044	66	1	0	logfile
✔	8CX0	27032	2024-02-13	2022-05-19	2.7	3.46	2.59	3.0	0.006	0.70	0.0	0.05	14.18	0.00	2.270	2.23	0.00	3.0	97.0	0.0	0.97	0.87	0.84	3.62	3.0	0.003	0.72	0.0	0.04	15.74	0.00	2.106	9.24	1.00	2.5	97.5	0.0	1.33	2.02	0.87	0.88	3.21	7575	889	8	8	3	0	0	logfile
✔	7ZWD	14997	2024-02-25	2022-05-19	3.0	3.30	3.03	3.0	0.005	0.62	0.0	0.04	17.25	0.00	1.559	7.53	0.02	3.3	96.7	0.0	0.25	0.83	0.79	2.29	3.0	0.004	0.74	0.0	0.04	18.52	0.00	2.127	14.65	2.07	3.8	96.2	0.0	0.47	1.39	0.85	0.85	2.18	49279	5789	32	132	12	0	0	logfile
✔	7XUN	33475	2024-02-13	2022-05-19	3.4	3.91	3.41	3.8	0.002	0.57	0.0	0.04	13.72	0.00	2.129	11.02	0.00	4.1	95.9	0.0	-0.92	0.72	0.76	0.33	3.8	0.004	0.68	0.0	0.05	15.88	0.00	2.137	13.82	2.77	5.2	94.8	0.0	-0.25	1.11	0.73	0.78	0.26	5591	741	1	0	0	0	0	logfile

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