Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8CSU	26971	2024-02-17	2022-05-13	3.03	2.74	3.02	2.9	0.004	0.64	1.0	0.39	19.37	0.00	1.964	2.56	0.02	1.5	98.5	0.0	1.16	0.69	0.77	2.72	2.9	0.004	0.77	0.0	0.12	19.76	0.00	1.949	6.25	1.30	1.9	98.1	0.0	1.42	0.42	0.70	0.80	2.38	68661	6119	40	882	38	0	0	logfile
✔	8CSP	26966	2024-02-17	2022-05-13	2.66	2.56	2.70	2.8	0.004	0.65	0.0	0.39	18.40	0.01	1.957	2.81	0.00	1.7	98.3	0.0	0.74	0.72	0.79	3.50	2.8	0.004	0.78	0.0	0.12	19.49	0.00	1.941	5.86	1.33	1.9	98.1	0.0	1.43	0.48	0.73	0.82	2.95	69302	6645	40	738	38	0	0	logfile
✔	8CSQ	26967	2024-02-16	2022-05-13	2.54	2.41	2.53	2.7	0.004	0.64	0.0	0.39	18.55	0.01	1.958	2.63	0.00	1.7	98.3	0.0	1.13	0.72	0.79	3.59	2.7	0.005	0.79	0.0	0.12	19.61	0.00	1.951	5.83	2.11	1.9	98.1	0.0	1.46	1.16	0.71	0.81	3.41	67706	6265	40	803	37	0	0	logfile
✔	8CST	26970	2024-02-15	2022-05-13	2.85	2.57	2.87	2.7	0.005	0.67	0.0	0.39	19.72	0.01	1.938	2.58	0.00	1.4	98.6	0.0	1.18	0.69	0.78	3.45	2.7	0.004	0.79	0.0	0.12	20.12	0.00	1.924	6.32	1.52	1.8	98.2	0.0	1.59	1.56	0.69	0.80	3.01	66351	5810	39	889	41	0	0	logfile
✔	8CTC	26985	2024-02-14	2022-05-13	2.8	2.97	2.80	3.2	0.005	0.74	0.0	0.05	14.01	0.00	1.917	4.18	0.00	3.0	97.0	0.0	0.39	0.60	0.80	1.61	3.2	0.003	0.54	0.0	0.04	15.49	0.00	2.169	5.69	2.56	2.8	97.2	0.0	1.39	1.16	0.55	0.79	1.79	9309	1221	9	0	12	12	0	logfile
✔	8CT6	26983	2024-02-16	2022-05-13	3.1	3.35	3.17	3.2	0.004	0.64	0.0	0.05	17.17	0.00	2.240	12.75	1.00	2.8	97.2	0.0	0.03	0.79	0.84	2.39	3.2	0.004	0.64	0.0	0.04	16.21	0.00	1.690	12.92	3.98	2.5	97.5	0.1	0.19	1.09	0.80	0.85	2.35	14918	1857	14	0	23	0	0	logfile
✔	8CT2	26978	2024-02-13	2022-05-13	3.1	2.85	3.02	2.9	0.004	0.61	0.0	0.04	12.30	0.00	2.209	4.55	2.03	2.6	97.0	0.4	1.50	0.61	0.86	5.28	2.9	0.004	0.59	0.0	0.04	13.27	0.00	2.204	6.06	2.16	2.5	97.1	0.4	1.72	0.23	0.62	0.86	4.93	7464	988	6	0	4	0	0	logfile
✔	7XSE	33424	2024-02-18	2022-05-13	3.6	3.90	3.46	3.1	0.005	0.56	0.0	0.04	16.54	0.00	2.019	6.64	0.00	2.3	97.7	0.0	1.42	0.77	0.72	1.58	3.1	0.004	0.62	0.0	0.04	18.20	0.00	1.998	12.04	0.92	3.2	96.8	0.0	0.64	1.68	0.78	0.77	1.45	75229	8667	41	276	11	0	0	logfile
✔	8CSV	26972	2024-02-13	2022-05-13	2.7	2.53	2.72	2.6	0.002	0.47	0.0	0.04	11.85	0.00	2.246	2.73	1.03	2.7	97.1	0.2	0.82	0.53	0.85	5.33	2.6	0.003	0.50	0.0	0.04	15.66	0.00	2.202	6.56	2.07	2.9	96.9	0.2	2.28	0.56	0.56	0.88	4.67	3712	483	3	0	0	48	0	logfile
✔	8CSR	26968	2024-02-17	2022-05-13	2.54	2.48	2.56	2.6	0.004	0.65	0.0	0.38	18.52	0.01	1.910	2.68	0.00	1.7	98.3	0.0	1.19	0.72	0.78	3.16	2.6	0.004	0.78	0.0	0.12	19.63	0.00	1.943	6.43	1.56	1.7	98.3	0.0	1.53	1.17	0.72	0.80	2.92	69868	6354	42	854	43	46	0	logfile
✔	8CSS	26969	2024-02-16	2022-05-13	2.36	2.40	2.38	2.4	0.004	0.64	0.0	0.39	18.56	0.01	1.953	2.42	0.02	1.4	98.6	0.0	1.44	0.72	0.79	3.45	2.4	0.005	0.82	0.0	0.12	19.62	0.00	1.897	6.23	1.60	1.8	98.2	0.0	1.39	0.47	0.73	0.82	3.36	67466	6062	44	847	46	104	0	logfile
✔	7XS7	33423	2024-02-15	2022-05-13	3.2	3.43	3.32	3.4	0.004	0.71	0.0	0.04	14.80	0.00	1.946	3.69	0.16	4.2	95.6	0.3	-2.73	0.69	0.86	3.61	3.4	0.002	0.53	0.0	0.04	15.53	0.00	2.328	2.73	1.32	4.9	95.0	0.1	0.18	0.98	0.67	0.87	2.99	12270	1458	4	0	42	0	0	logfile
✔	8CSZ	26976	2024-02-14	2022-05-13	3.2	3.55	3.13	3.3	0.005	0.67	0.0	0.04	23.81	0.00	1.962	11.72	0.00	4.9	95.1	0.0	-0.97	0.84	0.86	4.03	3.3	0.005	0.61	0.0	0.04	23.50	0.00	1.910	10.24	2.12	5.3	94.7	0.0	-0.41	1.11	0.84	0.88	3.45	8948	494	5	236	3	0	0	logfile
✔	8CSX	26974	2024-02-14	2022-05-13	2.4	2.08	2.44	2.1	0.006	0.79	1.0	0.05	15.46	0.01	2.208	4.92	3.86	1.7	98.2	0.1	1.76	0.69	0.88	5.16	2.1	0.003	0.54	0.0	0.04	15.03	0.00	2.099	5.92	2.90	1.5	98.5	0.0	2.15	0.35	0.69	0.88	4.43	9116	1158	8	0	4	150	0	logfile
✔	7ZUB	14971	2024-02-20	2022-05-12	2.85	2.68	2.85	2.8	0.005	0.56	0.0	0.04	17.29	0.00	1.965	5.44	1.10	4.3	95.7	0.0	0.60	0.81	0.84	3.58	2.8	0.003	0.54	0.0	0.04	17.28	0.00	1.971	5.12	1.49	4.2	95.8	0.0	0.07	2.20	0.80	0.85	3.35	28082	1722	7	0	7	0	14035	logfile
✔	8CSJ	26964	2024-02-21	2022-05-12	3.53	4.61	3.61	3.9	0.004	0.68	1.0	0.05	15.00	0.01	1.270	4.36	0.29	3.2	96.7	0.1	-0.73	0.88	0.83	1.60	3.9	0.004	0.65	0.0	0.04	15.07	0.00	2.097	13.27	2.56	4.7	95.3	0.1	0.03	1.28	0.89	0.86	1.64	31934	4035	18	0	45	0	0	logfile
✔	8CRX	26959	2024-02-23	2022-05-12	2.78	3.14	2.79	2.9	0.012	0.76	1.0	0.06	23.63	0.02	1.748	8.66	1.38	5.7	93.5	0.8	-0.21	0.86	0.88	2.84	3.0	0.008	0.83	0.0	0.05	23.58	0.01	1.563	12.29	4.10	6.4	93.2	0.4	-0.43	1.20	0.87	0.91	3.01	144606	5746	72	4614	393	129	0	logfile
✔	7XS6	33422	2024-02-15	2022-05-12	2.9	3.04	2.79	3.0	0.009	0.82	0.0	0.04	15.46	0.00	2.112	6.80	0.61	5.3	94.5	0.2	-1.32	0.69	0.85	3.57	3.0	0.002	0.49	0.0	0.04	15.88	0.00	2.214	6.56	1.14	3.7	96.3	0.0	0.51	0.38	0.62	0.84	3.01	12440	1458	4	0	44	0	0	logfile
✔	8CSA	26961	2024-02-19	2022-05-12	3.84	4.24	3.87	3.9	0.012	1.75	3.0	0.09	13.74	0.02	2.527	0.19	1.18	6.0	93.8	0.2	-1.46	0.82	0.78	0.63	3.9	0.003	0.63	0.0	0.04	15.03	0.00	2.087	11.86	1.98	3.7	96.3	0.0	-0.07	1.66	0.83	0.78	0.22	23442	3003	3	0	0	0	0	logfile
✔	7V0T	26950	2024-02-13	2022-05-11	2.7	2.57	2.75	2.6	0.004	0.63	0.0	0.04	19.43	0.00	2.151	6.08	3.45	1.6	98.3	0.2	0.57	0.58	0.85	3.41	2.6	0.006	0.71	0.0	0.04	19.49	0.00	2.121	9.01	4.06	2.3	97.7	0.0	0.74	0.32	0.58	0.87	3.53	4658	584	4	0	0	39	0	logfile

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