Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7TW1	26147	2024-02-19	2022-02-06	4.6	3.99	—	3.8	0.003	0.74	0.0	0.05	13.82	0.00	2.117	7.55	0.08	2.5	97.5	0.0	-0.20	0.75	0.78	—	3.7	0.005	0.71	0.0	0.04	14.02	0.00	2.104	15.31	0.00	5.1	94.9	0.0	-0.47	1.17	0.75	0.79	—	23625	2993	4	0	0	0	0	logfile
✔	7TW2	26148	2024-02-15	2022-02-06	4.8	4.73	—	3.9	0.003	0.75	0.0	0.04	13.67	0.01	2.177	9.73	0.07	2.2	97.8	0.0	-1.27	0.66	0.72	—	3.8	0.004	0.71	0.0	0.04	13.86	0.00	2.160	15.47	0.00	2.8	97.2	0.0	1.21	1.65	0.66	0.75	—	12838	1619	4	0	2	0	0	logfile
✔	7TW3	26149	2024-02-18	2022-02-06	4.4	4.83	—	4.4	0.004	0.75	0.0	0.04	13.70	0.01	2.104	9.87	0.08	3.0	97.0	0.0	-1.98	0.76	0.76	—	4.4	0.004	0.67	0.0	0.04	13.61	0.00	2.101	11.48	0.00	3.3	96.7	0.0	0.43	1.23	0.77	0.78	—	22641	2944	4	0	0	0	0	logfile
✔	7TVZ	26142	2024-02-17	2022-02-06	3.6	3.77	—	3.8	0.005	0.61	0.0	0.04	14.94	0.00	2.203	4.11	0.00	2.8	97.2	0.0	0.35	0.68	0.75	2.02	3.8	0.003	0.59	0.0	0.04	15.68	0.00	2.162	6.15	1.55	2.6	97.4	0.0	0.49	2.29	0.72	0.81	1.85	18659	2340	7	0	9	8	0	logfile
✔	7WTZ	32806	2024-02-20	2022-02-05	3.0	2.82	—	2.8	0.004	0.86	0.0	0.05	21.54	0.01	2.213	5.25	0.09	3.9	96.0	0.1	-1.27	0.78	0.76	2.32	2.8	0.005	0.69	1.0	0.04	22.05	0.00	1.935	10.74	1.96	3.8	96.1	0.0	0.37	1.15	0.80	0.79	1.98	85113	6331	36	1624	2	0	0	logfile
✔	7WTQ	32795	2024-02-25	2022-02-05	3.7	3.57	—	3.4	0.005	0.90	0.0	0.05	22.13	0.01	2.146	6.91	0.04	8.0	91.8	0.1	-1.90	0.82	0.79	1.74	3.4	0.007	0.79	0.0	0.04	22.34	0.01	1.983	16.71	4.14	9.7	90.2	0.1	-1.21	1.15	0.83	0.80	1.24	51309	3079	19	1255	1	0	0	logfile
✔	7WTN	32792	2024-02-24	2022-02-05	3.4	3.34	—	3.3	0.005	0.83	0.0	0.04	22.05	0.01	2.114	5.74	0.09	8.3	91.7	0.1	-1.93	0.83	0.84	2.55	3.3	0.004	0.63	0.0	0.04	21.92	0.01	2.047	10.13	2.50	8.9	91.0	0.2	-0.73	1.10	0.85	0.86	2.28	46427	2635	19	1200	1	0	0	logfile
✔	7WTX	32804	2024-02-20	2022-02-05	3.1	2.92	—	2.9	0.008	1.03	0.0	0.05	21.93	0.01	2.150	6.11	0.04	4.1	95.8	0.1	-1.33	0.75	0.72	2.55	2.9	0.008	0.82	0.0	0.05	22.13	0.01	1.992	11.12	2.42	4.6	95.3	0.0	0.03	1.14	0.78	0.77	2.25	85074	6371	36	1605	2	0	0	logfile
✔	7WTP	32794	2024-02-13	2022-02-05	3.8	3.62	—	3.4	0.007	0.96	0.0	0.05	22.22	0.01	2.103	8.20	0.04	8.7	91.1	0.1	-2.27	0.83	0.82	1.74	3.4	0.005	0.68	0.0	0.04	22.21	0.00	2.046	13.94	2.99	8.5	91.4	0.1	-1.27	0.35	0.83	0.82	1.42	52944	3296	20	1255	1	0	0	logfile
✔	7WTL	32790	2024-02-25	2022-02-05	3.3	3.22	—	3.1	0.003	0.80	0.0	0.04	21.47	0.01	2.096	6.20	0.04	6.2	93.7	0.1	-1.81	0.79	0.76	2.24	3.1	0.005	0.68	0.0	0.04	21.62	0.01	2.013	10.30	3.27	7.1	92.8	0.1	-0.95	0.36	0.82	0.81	1.79	49811	3298	21	1102	3	0	0	logfile
✔	7WU2	32817	2024-02-13	2022-02-05	2.8	2.56	—	2.8	0.002	0.51	0.0	0.04	12.86	0.00	2.200	6.51	0.00	2.1	97.9	0.0	0.79	0.64	0.77	2.92	2.8	0.003	0.55	0.0	0.04	16.00	0.00	2.186	7.02	2.74	3.4	96.6	0.0	0.89	1.20	0.65	0.81	3.27	7829	1010	5	0	0	0	0	logfile
✔	7WTR	32796	2024-02-13	2022-02-05	3.5	3.44	—	3.3	0.006	0.88	0.0	0.05	22.22	0.01	2.080	6.30	0.00	7.2	92.7	0.1	-3.07	0.84	0.83	2.34	3.3	0.007	0.75	0.0	0.04	22.30	0.01	2.054	12.74	2.70	9.0	90.9	0.1	-1.26	1.13	0.84	0.83	1.97	53512	3259	20	1298	1	0	0	logfile
✔	7WTo	32793	2024-02-24	2022-02-05	3.5	3.41	—	3.3	0.005	0.84	0.0	0.04	22.20	0.01	2.105	6.35	0.05	7.9	92.0	0.1	-2.03	0.85	0.84	2.16	3.3	0.006	0.74	0.0	0.04	22.19	0.01	2.066	11.99	2.71	10.1	89.7	0.2	-1.16	0.32	0.85	0.84	2.03	44490	2383	17	1200	1	0	0	logfile
✘	7WTM	32791	2024-02-24	2022-02-05	3.5	3.32	—	3.2	0.006	0.89	0.0	0.05	21.84	0.01	2.110	6.36	0.00	7.6	92.4	0.1	-1.86	0.80	0.78	2.14	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	44623	2651	18	1106	1	0	0	logfile
✔	7WTW	32803	2024-02-20	2022-02-05	3.2	3.12	—	3.0	0.004	0.80	0.0	0.04	21.28	0.01	1.921	6.44	0.02	4.1	95.8	0.0	-1.12	0.73	0.67	2.19	3.0	0.005	0.67	0.0	0.04	21.51	0.00	1.936	11.95	1.74	4.0	95.9	0.1	0.15	1.13	0.76	0.72	1.99	87147	6694	39	1586	2	0	0	logfile
✔	7WTT	32800	2024-02-20	2022-02-05	3.1	2.98	—	2.9	0.006	0.92	0.0	0.05	21.57	0.01	2.066	5.99	0.46	4.0	96.0	0.0	-1.30	0.70	0.65	2.39	2.9	0.004	0.66	0.0	0.04	21.77	0.00	2.041	11.76	1.71	3.9	96.1	0.0	-0.10	2.39	0.74	0.69	2.16	83677	6254	36	1575	1	0	0	logfile
✘	7WTU	32801	2024-02-19	2022-02-05	3.0	2.94	—	2.8	0.006	0.90	0.0	0.05	21.50	0.01	1.590	5.93	0.86	4.3	95.6	0.0	-1.34	0.70	0.65	2.51	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	81215	5957	35	1575	1	0	0	logfile
✔	7WU0	32807	2024-02-20	2022-02-05	3.3	3.18	—	3.0	0.003	0.81	0.0	0.04	21.59	0.01	2.194	5.85	0.05	3.9	96.0	0.1	-1.24	0.77	0.71	2.02	3.0	0.006	0.73	0.0	0.04	21.85	0.01	2.051	11.26	2.25	4.8	95.2	0.0	0.02	1.57	0.81	0.78	2.01	87656	6649	37	1624	2	0	0	logfile
✔	7WTS	32799	2024-02-14	2022-02-05	3.2	3.07	—	3.0	0.005	0.85	0.0	0.05	22.59	0.01	2.076	5.07	0.09	3.8	96.2	0.0	-1.00	0.75	0.75	2.70	3.0	0.005	0.68	0.0	0.04	22.62	0.01	2.038	9.50	1.98	4.2	95.8	0.0	0.19	0.38	0.78	0.80	2.50	61945	3777	23	1481	0	0	0	logfile
✔	7WTV	32802	2024-02-20	2022-02-05	3.5	3.24	—	3.1	0.005	0.84	0.0	0.05	21.33	0.01	2.111	5.70	0.02	4.1	95.9	0.0	-2.58	0.74	0.67	2.10	3.1	0.008	0.81	0.0	0.05	21.60	0.01	2.025	13.38	1.76	4.9	95.1	0.0	-0.48	1.17	0.75	0.70	1.90	84177	6353	37	1574	1	0	0	logfile

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