Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7WRi	32727	2024-02-13	2022-01-26	3.03	3.18	—	3.2	0.003	0.58	1.0	0.04	15.54	0.00	2.099	6.76	2.03	6.0	94.0	0.0	-4.19	0.73	0.80	2.23	3.1	0.003	0.59	0.0	0.04	16.73	0.00	1.994	7.95	2.61	7.5	92.5	0.0	-0.85	0.39	0.75	0.83	1.67	6431	790	4	0	2	0	0	logfile
✔	7WR8	32718	2024-02-13	2022-01-26	3.5	3.74	—	3.8	0.008	1.16	0.0	0.06	13.72	0.01	2.230	6.22	0.00	12.5	87.5	0.0	-3.48	0.51	0.78	3.43	3.8	0.003	0.65	0.0	0.04	15.47	0.00	2.162	10.26	3.12	9.0	91.0	0.0	-2.54	0.41	0.50	0.77	2.52	3286	417	4	0	3	0	0	logfile
✔	7QXP	14202	2024-02-23	2022-01-26	3.6	4.06	—	3.9	0.006	1.05	2.0	0.06	12.00	0.01	1.158	13.98	1.79	9.1	90.3	0.6	-4.34	0.74	0.74	1.36	3.9	0.005	0.80	1.0	0.05	15.23	0.00	1.848	14.63	2.36	8.7	91.2	0.1	-0.93	1.65	0.79	0.84	1.46	103732	13349	53	0	12	0	0	logfile
✔	7QXA	14196	2024-02-16	2022-01-26	3.2	3.14	3.21	3.2	0.010	1.18	0.0	0.09	22.12	0.01	2.254	0.91	0.28	6.0	93.6	0.4	-3.16	0.69	0.71	3.06	3.1	0.006	0.74	0.0	0.04	22.16	0.01	2.103	10.49	1.77	5.7	94.2	0.1	-0.39	0.72	0.75	0.81	2.58	15576	1247	6	265	0	0	0	logfile
✔	7TPT	26063	2024-02-25	2022-01-26	3.9	2.60	3.92	3.8	0.009	0.90	5.0	0.05	14.37	0.00	1.331	10.02	0.45	4.0	96.0	0.0	1.17	0.68	0.61	1.18	2.3	0.007	1.06	2.0	0.05	16.73	0.01	1.742	20.66	4.63	8.6	91.3	0.0	-1.51	0.74	0.72	0.68	1.54	50755	7217	52	0	47	0	0	logfile
✔	7WRC	32722	2024-02-21	2022-01-26	3.21	3.55	—	3.4	0.010	1.07	0.0	0.06	10.59	0.01	2.235	5.92	0.12	7.0	93.0	0.0	-3.90	0.71	0.77	2.04	3.4	0.005	0.78	2.0	0.04	14.80	0.00	1.949	12.99	2.46	5.4	94.6	0.0	0.49	1.72	0.73	0.83	1.71	30468	3720	8	0	8	0	0	logfile
✔	7TPC	26051	2024-02-18	2022-01-25	3.91	4.55	—	3.9	0.014	1.84	4.0	0.10	13.44	0.02	2.508	0.44	2.26	8.8	90.1	1.0	-2.02	0.83	0.77	0.71	3.9	0.004	0.69	0.0	0.04	13.72	0.00	2.148	13.07	2.55	7.4	92.5	0.1	-1.18	0.52	0.83	0.78	0.59	23199	2983	18	0	58	0	0	logfile
✔	7TPL	26059	2024-02-17	2022-01-25	3.87	4.36	—	3.8	0.013	1.79	10.0	0.10	13.64	0.02	2.519	0.40	1.94	8.6	90.3	1.1	-1.79	0.84	0.83	2.53	3.8	0.004	0.69	0.0	0.04	14.21	0.00	2.055	9.74	1.67	7.4	92.5	0.1	-0.33	0.55	0.84	0.83	1.64	19992	2485	18	0	46	0	0	logfile
✔	7QWG	14187	2024-02-13	2022-01-25	3.38	3.26	2.98	3.3	0.012	2.34	10.0	0.15	14.89	0.01	2.525	0.31	0.26	10.0	90.0	0.0	-3.26	0.41	0.82	4.16	3.3	0.004	0.74	0.0	0.05	17.03	0.00	2.223	11.06	3.44	10.0	90.0	0.0	-3.56	2.40	0.37	0.83	3.54	3258	405	3	0	0	0	0	logfile
✔	7TPF	26053	2024-02-19	2022-01-25	3.4	3.74	—	3.4	0.013	1.76	3.0	0.09	12.31	0.01	2.518	0.04	0.72	6.1	93.5	0.3	-0.86	0.84	0.86	3.82	3.4	0.002	0.59	0.0	0.04	12.78	0.00	2.152	4.23	0.72	4.0	95.9	0.1	0.41	0.45	0.85	0.87	2.97	23199	2983	18	0	58	0	0	logfile
✔	7QWS	14193	2024-02-20	2022-01-25	3.4	3.09	—	7.2	0.002	0.46	0.0	0.03	22.90	0.00	2.011	9.44	1.65	3.7	96.3	0.0	0.47	0.23	0.02	-0.02	3.0	0.004	0.88	0.0	0.04	24.72	0.01	0.987	26.15	2.43	8.3	91.7	0.1	-2.38	2.16	0.52	0.59	0.52	137913	7047	55	3769	126	0	0	logfile
✔	7TP8	26048	2024-02-18	2022-01-25	3.4	3.77	—	3.4	0.013	1.76	6.0	0.10	12.52	0.01	2.519	0.07	0.98	6.3	92.8	0.9	-0.98	0.84	0.85	4.23	3.4	0.004	0.61	0.0	0.04	12.89	0.00	2.227	4.27	0.64	4.8	95.0	0.1	0.15	1.61	0.85	0.87	2.94	23199	2983	18	0	58	0	0	logfile
✔	7TPR	26062	2024-02-21	2022-01-25	2.39	2.27	2.48	2.1	0.004	0.61	0.0	0.04	12.51	0.00	2.103	8.50	0.14	6.5	93.1	0.5	-1.21	0.73	0.73	3.55	2.1	0.003	0.66	0.0	0.05	14.92	0.00	2.132	8.61	1.17	5.7	94.1	0.2	-0.63	1.03	0.77	0.79	3.13	31738	4074	8	0	0	0	0	logfile
✔	7TPJ	26057	2024-02-13	2022-01-25	3.46	3.68	—	3.7	0.004	0.70	0.0	0.04	14.42	0.01	2.159	9.09	0.00	5.0	95.0	0.0	-0.01	0.57	0.69	1.76	3.7	0.003	0.62	0.0	0.04	16.48	0.00	2.253	8.15	1.60	5.0	95.0	0.0	0.73	1.42	0.60	0.72	1.81	4758	626	3	0	0	0	0	logfile
✔	7QWL	14188	2024-02-13	2022-01-25	3.47	3.11	2.99	3.5	0.012	2.27	14.0	0.13	13.78	0.01	2.501	3.69	1.06	11.3	88.2	0.5	-3.35	0.45	0.81	5.36	3.5	0.005	0.78	0.0	0.05	16.16	0.00	2.070	11.21	4.76	11.3	88.7	0.0	-3.25	3.78	0.37	0.81	4.64	3258	405	3	0	0	0	0	logfile
✔	7QWM	14189	2024-02-13	2022-01-25	2.76	2.21	2.47	2.2	0.012	1.93	3.0	0.11	13.26	0.01	2.502	0.15	0.00	8.0	92.0	0.0	-2.89	0.34	0.80	6.86	2.2	0.004	0.68	0.0	0.05	17.24	0.00	2.109	9.54	0.79	6.3	93.7	0.0	-2.85	0.51	0.37	0.82	6.28	3255	405	3	0	0	0	0	logfile
✔	7TPi	26056	2024-02-18	2022-01-25	2.3	2.38	—	2.3	0.013	1.55	12.0	0.10	10.36	0.01	2.100	2.28	0.49	2.1	97.9	0.0	0.35	0.75	0.78	5.09	2.3	0.003	0.61	0.0	0.05	12.90	0.00	2.206	2.91	1.15	1.3	98.7	0.0	0.86	1.11	0.72	0.74	4.79	21168	2862	12	0	54	0	0	logfile
✔	7TP7	26047	2024-02-19	2022-01-25	3.48	3.94	—	3.5	0.013	1.77	6.0	0.10	12.48	0.01	2.509	0.13	1.15	7.1	92.3	0.7	-1.13	0.84	0.84	3.20	3.5	0.003	0.60	0.0	0.04	13.00	0.00	2.164	5.25	0.89	3.9	96.0	0.1	0.18	0.49	0.84	0.86	2.54	23199	2983	18	0	58	0	0	logfile
✔	7TPA	26050	2024-02-18	2022-01-25	3.6	3.99	—	3.6	0.013	1.75	3.0	0.10	12.53	0.01	2.510	0.00	1.11	6.5	92.8	0.8	-1.19	0.84	0.85	2.96	3.6	0.006	0.68	0.0	0.04	12.98	0.00	2.116	5.67	1.23	5.7	94.1	0.2	-0.01	0.47	0.84	0.86	2.67	23199	2983	18	0	58	0	0	logfile
✘	7QWQ	14191	2024-02-23	2022-01-25	2.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	143809	7312	59	3936	158	0	0	logfile

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