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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8U66 | 41946 | 2024-07-25 | 2023-09-13 | 2.21 | 2.31 | 2.31 | 2.3 | 0.004 | 0.56 | 0.0 | 0.09 | 16.75 | 0.00 | 1.869 | 2.66 | 0.28 | 3.4 | 96.6 | 0.0 | 2.01 | 0.71 | 0.83 | 4.97 | 2.3 | 0.003 | 0.56 | 0.0 | 0.04 | 17.12 | 0.00 | 1.921 | 6.37 | 2.08 | 3.2 | 96.8 | 0.0 | 1.19 | 0.27 | 0.77 | 0.87 | 5.11 | 29365 | 3584 | 24 | 0 | 16 | 981 | 0 | logfile |
✘ | 8WCR | 37447 | 2024-07-21 | 2023-09-13 | 2.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14615 | 1560 | 15 | 0 | 50 | 270 | 0 | logfile |
✘ | 8WCQ | 37446 | 2024-07-21 | 2023-09-13 | 3.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14130 | 1560 | 10 | 0 | 45 | 0 | 0 | logfile |
✔ | 8QJJ | 18448 | 2024-07-19 | 2023-09-13 | 3.35 | 3.35 | 3.18 | 3.3 | 0.012 | 1.98 | 0.0 | 0.10 | 12.60 | 0.01 | 2.538 | 0.43 | 0.00 | 2.3 | 97.7 | 0.0 | -2.06 | 0.33 | 0.77 | 5.23 | 3.3 | 0.003 | 0.60 | 0.0 | 0.05 | 15.79 | 0.00 | 2.195 | 6.55 | 2.02 | 4.6 | 95.4 | 0.0 | -1.98 | 2.31 | 0.33 | 0.79 | 4.17 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 8WCS | 37448 | 2024-07-20 | 2023-09-13 | 3.1 | 3.46 | 3.33 | 3.5 | 0.004 | 0.77 | 0.0 | 0.05 | 21.59 | 0.01 | 2.148 | 4.70 | 0.74 | 8.6 | 91.4 | 0.0 | -2.55 | 0.70 | 0.76 | 1.66 | 3.5 | 0.003 | 0.57 | 0.0 | 0.04 | 21.35 | 0.00 | 2.171 | 10.32 | 4.74 | 9.6 | 90.4 | 0.0 | -0.18 | 0.32 | 0.67 | 0.78 | 1.60 | 10096 | 1044 | 3 | 66 | 1 | 0 | 0 | logfile |
✔ | 8U5Y | 41939 | 2024-07-26 | 2023-09-13 | 3.01 | 3.34 | — | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 14.42 | 0.00 | 2.027 | 5.30 | 0.57 | 4.0 | 96.0 | 0.0 | -1.43 | 0.86 | 0.83 | 3.28 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 14.83 | 0.00 | 1.969 | 6.40 | 0.73 | 5.1 | 94.9 | 0.0 | -1.25 | 0.50 | 0.86 | 0.83 | 3.40 | 34491 | 2089 | 4 | 16 | 0 | 0 | 17152 | logfile |
✔ | 8WCP | 37445 | 2024-07-18 | 2023-09-13 | 3.28 | 3.36 | 2.33 | 3.4 | 0.005 | 0.83 | 0.0 | 0.06 | 10.78 | 0.00 | 2.482 | 16.18 | 0.00 | 11.1 | 88.9 | 0.0 | -5.74 | 0.39 | 0.86 | 4.76 | 3.4 | 0.003 | 0.55 | 0.0 | 0.05 | 13.30 | 0.00 | 2.612 | 3.35 | 2.67 | 5.6 | 94.4 | 0.0 | -3.88 | 0.95 | 0.38 | 0.87 | 5.18 | 1536 | 168 | 9 | 0 | 57 | 0 | 0 | logfile |
✔ | 8U5H | 41922 | 2024-07-21 | 2023-09-12 | 3.23 | 3.43 | — | 3.4 | 0.005 | 0.71 | 0.0 | 0.06 | 30.15 | 0.00 | 2.200 | 13.39 | 0.85 | 4.6 | 95.4 | 0.0 | 0.94 | 0.72 | 0.83 | 0.90 | 3.4 | 0.008 | 0.73 | 0.0 | 0.04 | 30.28 | 0.00 | 2.129 | 15.38 | 3.54 | 5.4 | 94.6 | 0.0 | 1.14 | 0.38 | 0.72 | 0.84 | 1.24 | 13436 | 903 | 13 | 314 | 0 | 0 | 0 | logfile |
✔ | 8U53 | 41911 | 2024-07-20 | 2023-09-12 | 2.6 | 2.33 | 2.54 | 2.9 | 0.024 | 1.71 | 0.0 | 0.10 | 15.25 | 0.01 | 2.498 | 0.88 | 0.00 | 1.1 | 98.9 | 0.0 | 0.71 | 0.78 | 0.81 | 4.12 | 2.9 | 0.002 | 0.54 | 0.0 | 0.04 | 17.12 | 0.00 | 2.179 | 5.92 | 0.86 | 1.5 | 98.5 | 0.0 | 1.25 | 0.63 | 0.75 | 0.82 | 3.46 | 9562 | 1074 | 6 | 0 | 98 | 0 | 0 | logfile |
✔ | 8U4V | 41899 | 2024-07-19 | 2023-09-11 | 2.99 | 3.26 | 2.62 | 3.1 | 0.006 | 1.12 | 2.0 | 0.06 | 16.56 | 0.00 | 2.063 | 13.44 | 0.83 | 3.4 | 96.6 | 0.0 | 0.66 | 0.71 | 0.79 | 3.57 | 3.1 | 0.003 | 0.88 | 0.0 | 0.04 | 16.34 | 0.00 | 2.192 | 7.82 | 2.35 | 2.5 | 97.5 | 0.0 | 1.38 | 1.60 | 0.83 | 0.91 | 3.47 | 6637 | 862 | 8 | 0 | 1 | 3 | 0 | logfile |
✔ | 8WC7 | 37433 | 2024-07-19 | 2023-09-11 | 3.1 | 3.32 | 3.11 | 3.3 | 0.004 | 0.60 | 1.0 | 0.04 | 13.83 | 0.00 | 2.237 | 4.93 | 0.80 | 4.5 | 95.5 | 0.0 | -0.58 | 0.67 | 0.83 | 3.30 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.82 | 0.00 | 2.251 | 4.93 | 0.92 | 4.0 | 96.0 | 0.0 | 0.28 | 0.93 | 0.70 | 0.86 | 3.17 | 8532 | 1122 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8U4R | 41892 | 2024-07-19 | 2023-09-11 | 3.1 | 3.43 | 3.14 | 3.4 | 0.003 | 0.67 | 0.0 | 0.05 | 14.01 | 0.01 | 2.165 | 4.99 | 0.00 | 3.6 | 96.4 | 0.0 | 0.38 | 0.65 | 0.85 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4107 | 513 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC6 | 37432 | 2024-07-19 | 2023-09-11 | 3.2 | 3.26 | 3.10 | 3.3 | 0.008 | 0.99 | 2.0 | 0.07 | 13.34 | 0.01 | 2.130 | 8.47 | 1.10 | 5.1 | 94.9 | 0.0 | -0.22 | 0.72 | 0.84 | 3.41 | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 14.95 | 0.00 | 2.239 | 4.58 | 1.32 | 3.5 | 96.5 | 0.0 | 0.39 | 0.96 | 0.72 | 0.87 | 3.14 | 9183 | 1241 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC5 | 37431 | 2024-07-19 | 2023-09-11 | 3.3 | 2.84 | 2.93 | 3.0 | 0.006 | 1.09 | 3.0 | 0.08 | 14.80 | 0.01 | 2.206 | 10.49 | 1.80 | 6.6 | 93.4 | 0.0 | -2.33 | 0.60 | 0.68 | 2.61 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 16.11 | 0.00 | 2.165 | 6.60 | 1.80 | 5.7 | 94.3 | 0.0 | -0.96 | 0.95 | 0.62 | 0.72 | 1.94 | 8511 | 1111 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WCC | 37438 | 2024-07-18 | 2023-09-11 | 3.04 | 2.88 | 1.90 | 3.2 | 0.017 | 2.05 | 5.0 | 0.15 | 16.41 | 0.02 | 2.464 | 8.33 | 2.87 | 9.2 | 90.8 | 0.0 | -3.38 | 0.84 | 0.81 | 2.50 | 3.3 | 0.003 | 0.68 | 0.0 | 0.04 | 16.60 | 0.00 | 2.246 | 6.61 | 2.39 | 2.7 | 97.3 | 0.0 | 1.82 | 1.16 | 0.81 | 0.78 | 1.90 | 2056 | 270 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC3 | 37429 | 2024-07-19 | 2023-09-11 | 3.0 | 3.02 | 2.90 | 3.0 | 0.006 | 0.96 | 2.0 | 0.07 | 13.97 | 0.01 | 1.356 | 8.37 | 1.40 | 5.2 | 94.8 | 0.0 | -1.08 | 0.66 | 0.73 | 2.72 | 3.1 | 0.004 | 0.67 | 0.0 | 0.04 | 15.87 | 0.00 | 2.200 | 7.51 | 2.56 | 5.6 | 94.4 | 0.0 | 0.13 | 0.46 | 0.68 | 0.84 | 2.59 | 8418 | 1119 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WCA | 37436 | 2024-07-19 | 2023-09-11 | 3.48 | 3.71 | 3.50 | 3.7 | 0.006 | 0.87 | 5.0 | 0.06 | 13.52 | 0.01 | 2.105 | 10.04 | 0.89 | 4.3 | 95.7 | 0.0 | -0.41 | 0.66 | 0.74 | 1.96 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 15.14 | 0.00 | 2.119 | 8.25 | 2.16 | 3.2 | 96.8 | 0.0 | 0.48 | 0.39 | 0.69 | 0.80 | 1.63 | 8160 | 1110 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8WC4 | 37430 | 2024-07-19 | 2023-09-11 | 3.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8394 | 1110 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 8WC9 | 37435 | 2024-07-19 | 2023-09-11 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8394 | 1107 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8Qi7 | 18436 | 2024-07-21 | 2023-09-11 | 2.9 | 3.13 | 2.98 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 9.14 | 0.00 | 2.275 | 2.18 | 0.79 | 6.3 | 93.4 | 0.2 | -3.83 | 0.69 | 0.88 | 5.75 | 3.2 | 0.002 | 0.61 | 0.0 | 0.04 | 13.61 | 0.00 | 2.258 | 2.32 | 0.13 | 3.9 | 96.1 | 0.0 | 0.68 | 0.38 | 0.69 | 0.87 | 4.10 | 14609 | 1848 | 8 | 0 | 0 | 117 | 0 | logfile |