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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8Qi7 | 18436 | 2024-07-21 | 2023-09-11 | 2.9 | 3.13 | 2.98 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 9.14 | 0.00 | 2.275 | 2.18 | 0.79 | 6.3 | 93.4 | 0.2 | -3.83 | 0.69 | 0.88 | 5.75 | 3.2 | 0.002 | 0.61 | 0.0 | 0.04 | 13.61 | 0.00 | 2.258 | 2.32 | 0.13 | 3.9 | 96.1 | 0.0 | 0.68 | 0.38 | 0.69 | 0.87 | 4.10 | 14609 | 1848 | 8 | 0 | 0 | 117 | 0 | logfile |
✔ | 8WC6 | 37432 | 2024-07-19 | 2023-09-11 | 3.2 | 3.26 | 3.10 | 3.3 | 0.008 | 0.99 | 2.0 | 0.07 | 13.34 | 0.01 | 2.130 | 8.47 | 1.10 | 5.1 | 94.9 | 0.0 | -0.22 | 0.72 | 0.84 | 3.41 | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 14.95 | 0.00 | 2.239 | 4.58 | 1.32 | 3.5 | 96.5 | 0.0 | 0.39 | 0.96 | 0.72 | 0.87 | 3.14 | 9183 | 1241 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC7 | 37433 | 2024-07-19 | 2023-09-11 | 3.1 | 3.32 | 3.11 | 3.3 | 0.004 | 0.60 | 1.0 | 0.04 | 13.83 | 0.00 | 2.237 | 4.93 | 0.80 | 4.5 | 95.5 | 0.0 | -0.58 | 0.67 | 0.83 | 3.30 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.82 | 0.00 | 2.251 | 4.93 | 0.92 | 4.0 | 96.0 | 0.0 | 0.28 | 0.93 | 0.70 | 0.86 | 3.17 | 8532 | 1122 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WC5 | 37431 | 2024-07-19 | 2023-09-11 | 3.3 | 2.84 | 2.93 | 3.0 | 0.006 | 1.09 | 3.0 | 0.08 | 14.80 | 0.01 | 2.206 | 10.49 | 1.80 | 6.6 | 93.4 | 0.0 | -2.33 | 0.60 | 0.68 | 2.61 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 16.11 | 0.00 | 2.165 | 6.60 | 1.80 | 5.7 | 94.3 | 0.0 | -0.96 | 0.95 | 0.62 | 0.72 | 1.94 | 8511 | 1111 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8U4J | 41884 | 2024-07-23 | 2023-09-10 | 3.7 | 4.14 | 3.77 | 4.0 | 0.014 | 1.54 | 3.0 | 0.09 | 16.95 | 0.01 | 2.219 | 0.90 | 0.17 | 2.3 | 97.7 | 0.0 | -0.45 | 0.82 | 0.79 | 2.05 | 4.0 | 0.004 | 0.63 | 0.0 | 0.04 | 12.37 | 0.00 | 1.961 | 7.65 | 1.39 | 5.2 | 94.8 | 0.0 | -1.22 | 1.49 | 0.82 | 0.78 | 2.42 | 20432 | 1297 | 20 | 0 | 58 | 0 | 9582 | logfile |
✔ | 8U4K | 41885 | 2024-07-22 | 2023-09-10 | 4.27 | 4.73 | 4.32 | 4.3 | 0.013 | 1.64 | 1.0 | 0.09 | 16.02 | 0.02 | 2.383 | 1.03 | 0.19 | 3.8 | 96.2 | 0.0 | -0.65 | 0.87 | 0.72 | — | 4.4 | 0.004 | 0.72 | 0.0 | 0.04 | 11.84 | 0.00 | 1.961 | 14.50 | 0.19 | 8.3 | 91.7 | 0.0 | -1.79 | 3.58 | 0.87 | 0.76 | — | 19063 | 1228 | 15 | 0 | 35 | 0 | 9074 | logfile |
✔ | 8WBX | 37426 | 2024-07-19 | 2023-09-10 | 3.23 | 3.53 | 3.23 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 16.96 | 0.00 | 2.305 | 10.08 | 0.38 | 1.6 | 98.4 | 0.0 | 1.77 | 0.48 | 0.63 | 1.04 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 16.22 | 0.00 | 2.231 | 12.10 | 4.53 | 3.2 | 96.8 | 0.0 | 1.24 | 0.57 | 0.50 | 0.66 | 1.19 | 7331 | 934 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8U4C | 41878 | 2024-07-22 | 2023-09-10 | 3.6 | 4.15 | 3.69 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 17.06 | 0.00 | 1.722 | 13.82 | 0.00 | 6.8 | 93.0 | 0.2 | -1.32 | 0.87 | 0.82 | 2.06 | 3.7 | 0.004 | 0.62 | 0.0 | 0.04 | 17.16 | 0.00 | 2.187 | 15.61 | 3.75 | 7.7 | 92.0 | 0.2 | -1.54 | 1.15 | 0.88 | 0.84 | 1.86 | 14706 | 1826 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8U4L | 41886 | 2024-07-22 | 2023-09-10 | 3.31 | 3.91 | 3.35 | 3.7 | 0.013 | 1.52 | 2.0 | 0.09 | 15.71 | 0.01 | 2.364 | 1.08 | 0.09 | 2.0 | 98.0 | 0.0 | -0.38 | 0.84 | 0.83 | 3.21 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 12.30 | 0.00 | 2.030 | 5.19 | 1.21 | 3.6 | 96.4 | 0.0 | -0.57 | 1.21 | 0.81 | 0.83 | 3.29 | 19069 | 1230 | 15 | 0 | 35 | 0 | 9080 | logfile |
✔ | 8U4B | 41877 | 2024-07-23 | 2023-09-10 | 3.9 | 4.27 | 3.89 | 4.0 | 0.003 | 0.59 | 0.0 | 0.04 | 16.02 | 0.00 | 2.146 | 10.97 | 0.07 | 7.0 | 92.9 | 0.1 | -0.95 | 0.87 | 0.82 | 2.05 | 4.0 | 0.002 | 0.60 | 0.0 | 0.04 | 16.27 | 0.00 | 2.173 | 10.59 | 1.75 | 6.4 | 93.5 | 0.1 | -0.75 | 0.32 | 0.88 | 0.84 | 1.92 | 13212 | 1634 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8U4E | 41880 | 2024-07-22 | 2023-09-10 | 4.2 | 4.74 | 4.27 | 3.9 | 0.003 | 0.65 | 0.0 | 0.05 | 13.41 | 0.00 | 1.274 | 21.10 | 0.00 | 9.6 | 90.3 | 0.2 | -1.68 | 0.87 | 0.83 | — | 4.0 | 0.009 | 0.93 | 0.0 | 0.05 | 13.85 | 0.01 | 2.044 | 36.31 | 0.06 | 12.5 | 87.3 | 0.2 | -2.15 | 0.41 | 0.87 | 0.84 | — | 13948 | 1729 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8U4i | 41883 | 2024-07-23 | 2023-09-10 | 3.38 | 3.92 | 3.46 | 3.8 | 0.014 | 1.56 | 0.0 | 0.09 | 16.96 | 0.01 | 2.351 | 0.62 | 0.35 | 2.0 | 98.0 | 0.0 | -0.39 | 0.80 | 0.79 | 3.08 | 3.8 | 0.004 | 0.88 | 0.0 | 0.04 | 12.16 | 0.00 | 2.072 | 6.85 | 1.47 | 5.5 | 94.5 | 0.0 | -1.43 | 1.22 | 0.75 | 0.75 | 2.77 | 20434 | 1301 | 20 | 0 | 57 | 0 | 9593 | logfile |
✔ | 8QHS | 18416 | 2024-07-19 | 2023-09-10 | 2.3 | 2.47 | 2.33 | 2.4 | 0.006 | 0.68 | 0.0 | 0.05 | 17.61 | 0.00 | 2.089 | 5.84 | 6.56 | 1.3 | 98.7 | 0.0 | -0.18 | 0.40 | 0.89 | 6.91 | 2.4 | 0.003 | 0.44 | 0.0 | 0.04 | 17.18 | 0.00 | 2.126 | 5.93 | 0.82 | 1.3 | 98.7 | 0.0 | 1.42 | 0.37 | 0.41 | 0.91 | 6.33 | 6212 | 785 | 10 | 0 | 0 | 337 | 0 | logfile |
✔ | 8WBE | 37422 | 2024-07-21 | 2023-09-09 | 3.0 | 3.25 | 3.12 | 3.3 | 0.002 | 0.54 | 0.0 | 0.04 | 13.42 | 0.00 | 2.196 | 5.31 | 0.23 | 5.0 | 94.9 | 0.0 | -1.78 | 0.61 | 0.84 | 3.17 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.75 | 0.00 | 2.133 | 5.69 | 2.92 | 5.1 | 94.9 | 0.0 | -1.27 | 0.50 | 0.63 | 0.86 | 2.79 | 16094 | 2040 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WBC | 37420 | 2024-07-20 | 2023-09-09 | 3.03 | 3.32 | 3.19 | 3.3 | 0.003 | 0.51 | 0.0 | 0.04 | 12.97 | 0.00 | 2.129 | 5.70 | 0.26 | 5.0 | 94.9 | 0.1 | -1.39 | 0.64 | 0.85 | 3.17 | 3.3 | 0.004 | 0.53 | 0.0 | 0.04 | 15.60 | 0.00 | 2.051 | 6.18 | 1.22 | 4.8 | 95.2 | 0.0 | -1.05 | 0.91 | 0.64 | 0.86 | 2.73 | 10549 | 1339 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WBD | 37421 | 2024-07-21 | 2023-09-09 | 2.9 | 3.17 | 3.02 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 13.55 | 0.00 | 2.195 | 5.10 | 0.23 | 5.4 | 94.6 | 0.0 | -1.64 | 0.63 | 0.85 | 3.35 | 3.2 | 0.005 | 0.79 | 1.0 | 0.04 | 16.70 | 0.00 | 2.019 | 5.69 | 2.40 | 6.0 | 94.0 | 0.0 | -1.38 | 0.42 | 0.64 | 0.87 | 3.29 | 16157 | 2040 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8WBH | 37425 | 2024-07-20 | 2023-09-09 | 3.2 | 3.43 | 3.24 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 11.71 | 0.00 | 2.203 | 6.68 | 0.00 | 6.0 | 93.8 | 0.2 | -1.76 | 0.73 | 0.83 | 2.55 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 15.49 | 0.00 | 2.203 | 8.36 | 3.44 | 7.0 | 92.8 | 0.2 | -1.56 | 1.12 | 0.75 | 0.85 | 2.53 | 10284 | 1293 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WBF | 37423 | 2024-07-20 | 2023-09-09 | 2.99 | 3.28 | 3.15 | 3.3 | 0.002 | 0.51 | 0.0 | 0.04 | 13.35 | 0.00 | 2.224 | 6.39 | 0.08 | 7.2 | 92.8 | 0.0 | -1.12 | 0.59 | 0.83 | 3.14 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 16.56 | 0.00 | 2.215 | 6.81 | 3.02 | 7.4 | 92.6 | 0.0 | -1.01 | 0.96 | 0.59 | 0.84 | 3.23 | 10914 | 1364 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WBB | 37419 | 2024-07-19 | 2023-09-09 | 2.9 | 3.16 | 2.98 | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 19.18 | 0.00 | 2.213 | 8.88 | 0.51 | 5.6 | 94.3 | 0.1 | -1.79 | 0.66 | 0.87 | 2.29 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 19.36 | 0.00 | 2.187 | 5.70 | 2.87 | 6.3 | 93.7 | 0.0 | -1.08 | 0.34 | 0.66 | 0.88 | 2.39 | 5449 | 689 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8WBG | 37424 | 2024-07-20 | 2023-09-09 | 3.2 | 3.51 | 3.33 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 13.02 | 0.00 | 2.197 | 6.61 | 0.17 | 5.0 | 94.9 | 0.1 | -1.10 | 0.64 | 0.77 | 3.06 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 15.61 | 0.00 | 2.087 | 7.27 | 2.27 | 5.1 | 94.8 | 0.1 | -1.24 | 0.98 | 0.61 | 0.76 | 2.53 | 10854 | 1357 | 4 | 0 | 0 | 0 | 0 | logfile |