The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9U3R | 63825 | 2025-08-22 | 2025-03-18 | 3.23 | 2.34 | 3.32 | 2.9 | 0.002 | 0.57 | 0.0 | 0.04 | 17.68 | 0.00 | 2.172 | 9.03 | 0.14 | 1.5 | 98.5 | 0.0 | 0.94 | 0.69 | 0.65 | 1.15 | 2.9 | 0.004 | 0.67 | 0.0 | 0.04 | 18.05 | 0.00 | 2.522 | 11.97 | 4.02 | 2.4 | 97.6 | 0.0 | 1.17 | 1.09 | 0.72 | 0.69 | 1.20 | 6690 | 847 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 9NSV | 49753 | 2025-08-24 | 2025-03-17 | 2.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17487 | 1996 | 12 | 0 | 8 | 1394 | 0 | logfile |
✔ | 9MC8 | 63792 | 2025-08-22 | 2025-03-17 | 3.31 | 3.92 | 3.44 | 3.9 | 0.005 | 0.85 | 0.0 | 0.04 | 15.34 | 0.01 | 2.353 | 11.30 | 0.26 | 3.3 | 96.7 | 0.0 | 0.19 | 0.43 | 0.67 | 1.71 | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 15.80 | 0.01 | 2.560 | 5.65 | 2.31 | 1.9 | 98.1 | 0.0 | 2.84 | 0.48 | 0.49 | 0.73 | 1.98 | 3721 | 489 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 9QHH | 53169 | 2025-08-24 | 2025-03-15 | 3.1 | 3.65 | — | 3.3 | 0.006 | 0.81 | 0.0 | 0.05 | 17.22 | 0.01 | 2.114 | 15.67 | 0.84 | 3.7 | 96.2 | 0.2 | -0.12 | 0.79 | 0.72 | 1.48 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 17.54 | 0.00 | 2.324 | 9.47 | 2.73 | 2.8 | 97.2 | 0.0 | 0.67 | 1.18 | 0.80 | 0.76 | 1.47 | 22339 | 2803 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9MAU | 63758 | 2025-08-22 | 2025-03-14 | 2.87 | 3.31 | 2.79 | 3.3 | 0.010 | 1.39 | 0.0 | 0.09 | 12.11 | 0.01 | 2.403 | 4.62 | 0.00 | 2.2 | 97.8 | 0.0 | -0.76 | 0.43 | 0.69 | 2.53 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.09 | 0.00 | 2.609 | 4.87 | 1.46 | 1.8 | 98.2 | 0.0 | 2.26 | 1.07 | 0.47 | 0.73 | 2.05 | 3874 | 506 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9NR6 | 49723 | 2025-08-24 | 2025-03-14 | 3.26 | 3.49 | 3.31 | 3.5 | 0.003 | 0.62 | 0.0 | 0.05 | 16.71 | 0.00 | 2.281 | 4.39 | 0.11 | 3.4 | 96.6 | 0.0 | -0.70 | 0.68 | 0.78 | 3.08 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 15.32 | 0.00 | 2.242 | 4.77 | 2.25 | 4.1 | 95.9 | 0.0 | -0.39 | 1.39 | 0.71 | 0.83 | 3.18 | 19239 | 2512 | 26 | 0 | 36 | 0 | 0 | logfile |
✔ | 9QH3 | 53153 | 2025-08-25 | 2025-03-14 | 2.4 | 3.18 | 2.71 | 3.1 | 0.005 | 0.83 | 0.0 | 0.05 | 15.21 | 0.04 | 2.182 | 5.20 | 0.37 | 3.7 | 96.3 | 0.0 | -1.39 | 0.70 | 0.81 | 3.72 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 16.00 | 0.00 | 2.379 | 2.46 | 0.67 | 2.4 | 97.6 | 0.0 | 1.90 | 0.57 | 0.71 | 0.83 | 4.30 | 25636 | 1684 | 10 | 3 | 0 | 45 | 12816 | logfile |
✔ | 9NR8 | 49725 | 2025-08-23 | 2025-03-14 | 3.53 | 3.82 | 3.59 | 3.8 | 0.004 | 0.72 | 1.0 | 0.05 | 17.14 | 0.01 | 1.787 | 4.85 | 0.15 | 5.5 | 94.5 | 0.0 | -0.94 | 0.72 | 0.77 | 2.04 | 3.8 | 0.005 | 0.82 | 0.0 | 0.04 | 16.00 | 0.01 | 2.388 | 5.83 | 2.55 | 5.4 | 94.6 | 0.0 | -0.13 | 0.42 | 0.74 | 0.80 | 2.32 | 14576 | 1958 | 18 | 0 | 22 | 0 | 0 | logfile |
✔ | 9NRA | 49727 | 2025-08-24 | 2025-03-14 | 4.18 | 4.45 | 4.22 | 4.4 | 0.004 | 0.89 | 0.0 | 0.05 | 13.30 | 0.00 | 2.160 | 7.54 | 0.00 | 5.8 | 94.2 | 0.0 | -1.74 | 0.67 | 0.70 | — | 4.4 | 0.005 | 0.77 | 0.0 | 0.04 | 13.33 | 0.00 | 2.445 | 15.26 | 0.00 | 6.6 | 93.3 | 0.1 | -0.59 | 1.96 | 0.70 | 0.76 | — | 15598 | 1964 | 12 | 0 | 235 | 0 | 0 | logfile |
✔ | 9NR7 | 49724 | 2025-08-24 | 2025-03-14 | 4.18 | 4.40 | 4.16 | 4.3 | 0.003 | 0.82 | 0.0 | 0.05 | 12.99 | 0.00 | 2.228 | 6.44 | 0.07 | 5.8 | 94.2 | 0.0 | -1.52 | 0.65 | 0.65 | — | 4.3 | 0.004 | 0.72 | 0.0 | 0.04 | 13.12 | 0.00 | 2.475 | 13.57 | 0.00 | 6.3 | 93.7 | 0.0 | -0.80 | 0.72 | 0.68 | 0.71 | — | 15553 | 1958 | 12 | 0 | 235 | 0 | 0 | logfile |
✔ | 9QH0 | 53151 | 2025-08-23 | 2025-03-14 | 2.52 | 3.21 | 2.61 | 3.0 | 0.005 | 0.70 | 0.0 | 0.05 | 14.00 | 0.02 | 2.199 | 7.21 | 0.00 | 2.6 | 97.4 | 0.0 | 0.54 | 0.77 | 0.86 | 3.35 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 16.04 | 0.00 | 2.503 | 5.01 | 0.95 | 2.0 | 98.0 | 0.0 | 2.46 | 0.72 | 0.74 | 0.86 | 3.68 | 12946 | 1702 | 6 | 0 | 0 | 7 | 0 | logfile |
✔ | 9NR9 | 49726 | 2025-08-23 | 2025-03-14 | 4.22 | 4.46 | 4.22 | 4.3 | 0.003 | 0.86 | 0.0 | 0.05 | 12.70 | 0.00 | 2.281 | 6.21 | 0.00 | 5.2 | 94.8 | 0.0 | -1.29 | 0.69 | 0.72 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 12.77 | 0.00 | 2.461 | 10.09 | 0.08 | 5.1 | 94.9 | 0.0 | 0.54 | 0.54 | 0.70 | 0.74 | — | 13679 | 1865 | 10 | 0 | 4 | 0 | 0 | logfile |
✔ | 9M9Y | 63744 | 2025-08-22 | 2025-03-13 | 3.04 | 3.54 | 3.11 | 3.5 | 0.009 | 1.35 | 1.0 | 0.09 | 10.66 | 0.01 | 2.386 | 7.64 | 0.00 | 3.0 | 97.0 | 0.0 | 0.31 | 0.50 | 0.77 | 1.76 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 13.69 | 0.00 | 2.584 | 4.83 | 1.77 | 1.3 | 98.7 | 0.0 | 2.88 | 1.39 | 0.47 | 0.75 | 1.33 | 3668 | 475 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9NQU | 49676 | 2025-08-24 | 2025-03-13 | 3.16 | 3.46 | — | 3.1 | 0.005 | 0.79 | 0.0 | 0.07 | 28.78 | 0.00 | 2.012 | 38.25 | 1.83 | 7.7 | 92.3 | 0.0 | 0.16 | 0.78 | 0.70 | 0.48 | 3.1 | 0.005 | 0.83 | 1.0 | 0.04 | 28.03 | 0.00 | 2.010 | 12.21 | 3.95 | 4.6 | 95.4 | 0.0 | 1.27 | 1.07 | 0.81 | 0.74 | 0.65 | 17358 | 1229 | 12 | 370 | 3 | 0 | 0 | logfile |
✔ | 9QG1 | 53127 | 2025-08-24 | 2025-03-13 | 3.3 | 3.70 | 3.41 | 3.6 | 0.004 | 0.67 | 0.0 | 0.05 | 19.11 | 0.00 | 1.372 | 6.82 | 3.69 | 4.3 | 95.0 | 0.7 | 1.97 | 0.67 | 0.65 | 1.12 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 18.74 | 0.00 | 1.237 | 6.20 | 2.70 | 3.0 | 97.0 | 0.0 | 2.95 | 1.05 | 0.75 | 0.79 | 1.62 | 21968 | 2736 | 32 | 0 | 48 | 0 | 0 | logfile |
✔ | 9M9V | 63741 | 2025-08-22 | 2025-03-13 | 3.31 | 3.80 | 3.40 | 3.7 | 0.012 | 1.40 | 2.0 | 0.09 | 12.13 | 0.01 | 2.402 | 2.78 | 0.51 | 2.3 | 97.7 | 0.0 | -0.35 | 0.53 | 0.74 | 2.36 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 15.88 | 0.00 | 2.346 | 7.69 | 1.78 | 2.5 | 97.3 | 0.2 | 2.67 | 1.99 | 0.52 | 0.75 | 1.50 | 3765 | 496 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 9NQD | 49649 | 2025-08-26 | 2025-03-12 | 3.3 | 4.38 | 3.74 | 18.0 | 0.016 | 2.96 | 72.0 | 0.15 | 17.39 | 0.01 | 2.307 | 5.98 | 0.00 | 3.0 | 97.0 | 0.0 | -4.31 | 0.55 | 0.34 | 1.32 | 16.0 | 0.004 | 1.11 | 0.0 | 0.05 | 17.48 | 0.00 | 1.847 | 29.04 | 3.64 | 17.2 | 82.6 | 0.2 | -6.31 | 1.77 | 0.69 | 0.61 | 0.64 | 33612 | 2460 | 12 | 0 | 0 | 0 | 16380 | logfile |
✘ | 9NPY | 49636 | 2025-08-25 | 2025-03-11 | 2.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25171 | 1877 | 36 | 483 | 32 | 827 | 0 | logfile |
✔ | 9QFH | 53109 | 2025-08-25 | 2025-03-11 | 2.9 | 3.06 | — | 1.8 | 0.005 | 0.62 | 0.0 | 0.04 | 12.86 | 0.01 | 2.219 | 6.05 | 0.29 | 2.1 | 97.9 | 0.0 | 1.12 | 0.77 | 0.65 | 2.28 | 1.8 | 0.003 | 0.52 | 0.0 | 0.04 | 15.18 | 0.00 | 2.504 | 4.60 | 0.74 | 1.8 | 98.2 | 0.0 | 2.12 | 1.37 | 0.87 | 0.89 | 3.53 | 29625 | 3759 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 9M84 | 63701 | 2025-08-25 | 2025-03-11 | 3.61 | 3.95 | 3.79 | 3.8 | 0.004 | 0.78 | 0.0 | 0.04 | 17.91 | 0.01 | 1.876 | 6.19 | 0.41 | 7.6 | 92.3 | 0.1 | -1.95 | 0.74 | 0.67 | 0.95 | 3.8 | 0.003 | 0.74 | 0.0 | 0.05 | 18.79 | 0.01 | 1.972 | 13.04 | 2.31 | 5.3 | 94.7 | 0.0 | -1.19 | 0.99 | 0.74 | 0.66 | 0.77 | 24018 | 2931 | 8 | 58 | 3 | 0 | 0 | logfile |