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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8So3 | 40646 | 2024-03-17 | 2023-04-28 | 3.61 | 3.84 | 3.58 | 3.8 | 0.005 | 0.85 | 1.0 | 0.05 | 13.96 | 0.01 | 1.803 | 10.38 | 0.68 | 6.5 | 93.4 | 0.2 | -1.49 | 0.73 | 0.72 | 2.26 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16718 | 1205 | 8 | 0 | 4 | 0 | 7947 | logfile |
✘ | 8J7A | 36036 | 2024-03-22 | 2023-04-27 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34246 | 3121 | 30 | 0 | 198 | 0 | 0 | logfile |
✘ | 8J7B | 36037 | 2024-03-23 | 2023-04-27 | 3.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35077 | 3213 | 30 | 0 | 201 | 0 | 0 | logfile |
✘ | 8J6Z | 36021 | 2024-03-24 | 2023-04-26 | 2.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43924 | 3964 | 38 | 0 | 263 | 0 | 0 | logfile |
✘ | 8oUW | 17204 | 2024-03-10 | 2023-04-25 | 3.75 | 3.90 | 3.25 | 3.5 | 0.006 | 0.91 | 0.0 | 0.05 | 14.71 | 0.01 | 2.008 | 0.19 | 0.38 | 2.0 | 98.0 | 0.0 | 0.31 | 0.81 | 0.65 | 1.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53754 | 6564 | 25 | 67 | 13 | 0 | 0 | logfile |
✘ | 8J5A | 35984 | 2024-03-19 | 2023-04-21 | 1.19 | 1.12 | 1.22 | 1.2 | 0.014 | 1.48 | 0.0 | 0.08 | 13.93 | 0.01 | 1.560 | 8.49 | 3.21 | 0.6 | 99.4 | 0.0 | 3.37 | 0.51 | 0.66 | 8.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56208 | 4128 | 24 | 0 | 24 | 3384 | 17040 | logfile |
✘ | 8SL0 | 40570 | 2024-03-10 | 2023-04-20 | 3.3 | 4.17 | 3.09 | 3.8 | 0.003 | 0.62 | 0.0 | 0.05 | 16.00 | 0.00 | 2.201 | 7.96 | 0.00 | 8.4 | 91.2 | 0.4 | -1.67 | 0.42 | 0.83 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 1737 | 228 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 8SKV | 40568 | 2024-03-19 | 2023-04-20 | 3.1 | 3.28 | 3.10 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.90 | 0.00 | 2.020 | 4.46 | 0.08 | 5.9 | 94.0 | 0.1 | -0.35 | 0.67 | 0.75 | 2.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23561 | 1632 | 15 | 0 | 15 | 0 | 11341 | logfile |
✘ | 8J4T | 35977 | 2024-03-19 | 2023-04-20 | 3.6 | 3.75 | 3.63 | 3.7 | 0.002 | 0.54 | 0.0 | 0.04 | 13.80 | 0.00 | 2.190 | 10.72 | 0.00 | 4.3 | 95.5 | 0.1 | 0.04 | 0.74 | 0.75 | 1.35 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22628 | 2776 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 8J4F | 35975 | 2024-03-15 | 2023-04-19 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12419 | 1446 | 7 | 0 | 30 | 0 | 0 | logfile |
✘ | 8SiA | 40504 | 2024-03-17 | 2023-04-14 | 2.91 | 3.13 | 3.00 | 3.1 | 0.013 | 1.24 | 0.0 | 0.09 | 19.00 | 0.01 | 1.993 | 5.03 | 0.72 | 14.5 | 85.0 | 0.5 | -6.42 | 0.61 | 0.69 | 3.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 74681 | 4420 | 8 | 0 | 65 | 0 | 36144 | logfile |
✘ | 8SGS | 40466 | 2024-03-15 | 2023-04-13 | 3.15 | 3.84 | 3.19 | 3.6 | 0.082 | 3.74 | 0.0 | 0.04 | 15.17 | 0.02 | 1.737 | 12.86 | 1.41 | 1.1 | 98.9 | 0.0 | 1.80 | 0.85 | 0.81 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11720 | 1524 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 8J1Q | 35930 | 2024-03-10 | 2023-04-13 | 3.3 | 4.10 | 3.20 | 3.9 | 0.030 | 1.93 | 0.0 | 0.05 | 28.59 | 0.00 | 2.043 | 8.92 | 0.28 | 7.1 | 92.9 | 0.0 | -1.02 | 0.73 | 0.64 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5447 | 427 | 5 | 90 | 1 | 0 | 0 | logfile |
✘ | 8SGo | 40462 | 2024-03-22 | 2023-04-12 | 2.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 34702 | 2121 | 19 | 0 | 33 | 0 | 16960 | logfile |
✘ | 8J1B | 35918 | 2024-03-18 | 2023-04-12 | 3.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19427 | 2388 | 8 | 0 | 5 | 0 | 0 | logfile |
✘ | 8J0D | 35899 | 2024-03-15 | 2023-04-10 | 3.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9105 | 711 | 8 | 0 | 74 | 0 | 0 | logfile |
✘ | 8oPN | 17077 | 2024-03-20 | 2023-04-07 | 4.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28543 | 3555 | 13 | 0 | 40 | 0 | 0 | logfile |
✘ | 8oPo | 17078 | 2024-03-21 | 2023-04-07 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28965 | 3585 | 18 | 0 | 57 | 0 | 0 | logfile |
✘ | 8oPM | 17076 | 2024-03-21 | 2023-04-07 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29802 | 3582 | 42 | 0 | 123 | 0 | 0 | logfile |
✘ | 8iXL | 35795 | 2024-03-15 | 2023-04-01 | 3.5 | 3.61 | 3.45 | 3.6 | 0.012 | 1.48 | 0.0 | 0.10 | 11.65 | 0.00 | 2.568 | 2.07 | 0.00 | 0.4 | 99.6 | 0.0 | 2.40 | 0.71 | 0.84 | 1.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10970 | 1455 | 35 | 0 | 0 | 0 | 0 | logfile |