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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8EXX | 28663 | 2025-08-23 | 2022-10-26 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11862 | 1354 | 5 | 57 | 4 | 0 | 0 | logfile |
✘ | 8EXP | 28658 | 2025-08-23 | 2022-10-25 | 4.2 | 4.47 | 4.30 | 4.6 | 0.019 | 1.74 | 0.0 | 0.10 | 10.69 | 0.01 | 2.031 | 5.52 | 0.60 | 3.4 | 96.4 | 0.2 | -0.04 | 0.53 | 0.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9024 | 1078 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 8H9K | 34570 | 2025-08-22 | 2022-10-25 | 3.51 | 3.83 | 3.65 | 3.7 | 0.006 | 0.91 | 0.0 | 0.05 | 15.47 | 0.01 | 2.169 | 13.42 | 0.00 | 5.8 | 94.2 | 0.0 | -2.34 | 0.39 | 0.77 | 1.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3381 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8H87 | 34531 | 2025-08-22 | 2022-10-21 | 2.53 | 2.73 | 2.50 | 2.7 | 0.011 | 1.55 | 0.0 | 0.08 | 18.83 | 0.02 | 2.300 | 4.48 | 0.91 | 2.3 | 97.7 | 0.0 | -1.32 | 0.58 | 0.79 | 4.94 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7083 | 777 | 6 | 0 | 48 | 147 | 0 | logfile |
✘ | 8BE0 | 15996 | 2025-08-26 | 2022-10-20 | 2.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36361 | 2179 | 18 | 44 | 3 | 95 | 17924 | logfile |
✘ | 8BDR | 15984 | 2025-08-26 | 2022-10-19 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36279 | 2173 | 11 | 43 | 3 | 0 | 17963 | logfile |
✘ | 8BCV | 15969 | 2025-08-26 | 2022-10-17 | 2.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37485 | 3258 | 46 | 0 | 224 | 703 | 0 | logfile |
✘ | 8ES9 | 28572 | 2025-08-23 | 2022-10-13 | 3.25 | 3.52 | 3.21 | 3.4 | 0.005 | 0.77 | 0.0 | 0.05 | 14.59 | 0.00 | 2.176 | 6.90 | 0.00 | 5.4 | 94.6 | 0.1 | 0.26 | 0.71 | 0.84 | 2.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11844 | 1459 | 17 | 0 | 14 | 0 | 0 | logfile |
✘ | 8ERA | 28551 | 2025-08-25 | 2022-10-11 | 2.86 | 3.52 | 2.95 | 3.4 | 0.005 | 0.77 | 1.0 | 0.05 | 16.12 | 0.01 | 2.202 | 5.15 | 1.11 | 5.6 | 94.3 | 0.1 | 0.09 | 0.70 | 0.80 | 1.89 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29054 | 3644 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 8EP0 | 28494 | 2025-08-25 | 2022-10-04 | 4.9 | 6.49 | 5.03 | 5.3 | 0.004 | 0.79 | 0.0 | 0.05 | 12.19 | 0.01 | 2.237 | 11.81 | 0.00 | 3.6 | 96.4 | 0.0 | 0.06 | 0.70 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24408 | 3372 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 8H1T | 34431 | 2025-08-24 | 2022-10-04 | 3.0 | 3.40 | 1.60 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 24.61 | 0.00 | 2.164 | 10.82 | 0.00 | 2.2 | 97.8 | 0.0 | 2.26 | 0.72 | 0.67 | 1.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17365 | 1323 | 14 | 334 | 0 | 0 | 0 | logfile |
✘ | 8EMR | 28262 | 2025-08-22 | 2022-09-28 | 2.92 | 3.25 | 2.98 | 3.2 | 0.003 | 0.63 | 0.0 | 0.05 | 14.91 | 0.00 | 2.263 | 5.06 | 0.12 | 4.4 | 95.6 | 0.0 | -0.58 | 0.74 | 0.79 | 2.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7685 | 952 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 8GZZ | 34406 | 2025-08-22 | 2022-09-27 | 3.52 | 3.89 | 3.45 | 3.7 | 0.004 | 0.62 | 0.0 | 0.04 | 12.19 | 0.00 | 2.248 | 8.72 | 0.00 | 5.0 | 95.0 | 0.0 | -0.99 | 0.78 | 0.86 | 3.03 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6568 | 854 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 8GWG | 34312 | 2025-08-24 | 2022-09-17 | 3.37 | 3.96 | 3.48 | 7.9 | 0.009 | 0.95 | 5.0 | 0.06 | 18.83 | 0.01 | 2.045 | 13.49 | 5.14 | 8.4 | 91.2 | 0.4 | -1.94 | 0.59 | 0.16 | -0.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21955 | 2668 | 13 | 52 | 9 | 1 | 0 | logfile |
✘ | 8B3J | 15830 | 2025-08-22 | 2022-09-16 | 3.1 | 3.34 | 3.18 | 3.3 | 0.005 | 0.63 | 0.0 | 0.05 | 15.71 | 0.00 | 2.144 | 7.52 | 0.00 | 7.6 | 92.4 | 0.0 | -2.49 | 0.44 | 0.88 | 3.25 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5688 | 718 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8GWA | 34307 | 2025-08-26 | 2022-09-16 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37660 | 4006 | 27 | 0 | 160 | 0 | 0 | logfile |
✘ | 8B3o | 15831 | 2025-08-24 | 2022-09-16 | 2.97 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -3.91 | — | — | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | 3.14 | — | — | — | 1.45 | 20475 | 2720 | 45 | 0 | 0 | 0 | 0 | logfile |
✘ | 8B3P | 15832 | 2025-08-24 | 2022-09-16 | 2.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -0.91 | — | — | 1.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | 6.06 | — | — | — | -0.04 | 17620 | 2370 | 55 | 0 | 0 | 0 | 0 | logfile |
✘ | 8B3Q | 15833 | 2025-08-25 | 2022-09-16 | 2.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -1.09 | — | — | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | 6.60 | — | — | — | -0.19 | 25095 | 3395 | 75 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EJ5 | 28176 | 2025-08-22 | 2022-09-16 | 4.9 | 4.58 | 4.61 | 4.6 | 0.012 | 1.52 | 1.0 | 0.09 | 12.69 | 0.01 | 2.466 | 13.91 | 3.27 | 2.0 | 97.2 | 0.8 | 1.40 | 0.43 | 0.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 5818 | 727 | 4 | 0 | 0 | 0 | 0 | logfile |