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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9ERE | 19913 | 2025-01-20 | 2024-03-22 | 2.82 | 3.01 | 2.84 | 3.0 | 0.005 | 0.64 | 0.0 | 0.04 | 17.12 | 0.01 | 1.903 | 5.42 | 0.61 | 2.7 | 97.3 | 0.0 | 0.59 | 0.72 | 0.83 | 3.79 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 17.96 | 0.01 | 1.993 | 6.05 | 1.83 | 2.3 | 97.7 | 0.0 | 0.87 | 0.38 | 0.72 | 0.84 | 3.39 | 14541 | 1654 | 7 | 56 | 9 | 0 | 0 | logfile |
✔ | 9B58 | 44203 | 2025-01-14 | 2024-03-22 | 3.39 | 3.89 | 3.38 | 3.8 | 0.003 | 0.45 | 0.0 | 0.04 | 10.33 | 0.00 | 1.812 | 3.00 | 1.10 | 4.2 | 95.8 | 0.0 | 0.81 | 0.81 | 0.81 | 2.15 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 13.63 | 0.00 | 2.458 | 7.02 | 2.03 | 3.7 | 96.3 | 0.0 | 0.65 | 0.60 | 0.85 | 0.85 | 1.49 | 4871 | 599 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 9B5M | 44217 | 2025-01-16 | 2024-03-22 | 2.79 | 3.25 | 2.83 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 9.70 | 0.00 | 2.034 | 1.18 | 0.91 | 2.0 | 98.0 | 0.0 | 1.13 | 0.67 | 0.75 | 3.99 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 13.17 | 0.00 | 2.026 | 2.59 | 1.11 | 1.7 | 98.3 | 0.0 | 1.24 | 1.55 | 0.68 | 0.77 | 3.74 | 8935 | 1133 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 9B5E | 44209 | 2025-01-17 | 2024-03-22 | 2.81 | 3.27 | 2.83 | 3.1 | 0.003 | 0.44 | 0.0 | 0.04 | 9.40 | 0.00 | 2.037 | 1.39 | 1.15 | 1.7 | 98.3 | 0.0 | 1.33 | 0.67 | 0.74 | 3.55 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 13.25 | 0.00 | 2.018 | 2.58 | 2.04 | 1.7 | 98.3 | 0.0 | 1.67 | 1.13 | 0.76 | 0.85 | 3.16 | 10128 | 1283 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 8YRG | 39542 | 2025-01-15 | 2024-03-21 | 3.14 | 2.21 | 3.09 | 2.0 | 0.007 | 0.69 | 0.0 | 0.05 | 12.79 | 0.00 | 2.093 | 9.25 | 0.00 | 7.4 | 92.6 | 0.0 | -0.87 | 0.74 | 0.75 | 3.71 | 1.9 | 0.002 | 0.59 | 0.0 | 0.04 | 14.86 | 0.00 | 2.544 | 6.14 | 2.17 | 3.5 | 96.5 | 0.0 | 0.81 | 0.94 | 0.74 | 0.76 | 2.70 | 7977 | 1079 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8YRJ | 39543 | 2025-01-13 | 2024-03-21 | 3.87 | 4.13 | 3.94 | 4.1 | 0.003 | 0.54 | 0.0 | 0.04 | 19.29 | 0.00 | 2.240 | 4.49 | 0.00 | 3.6 | 96.0 | 0.4 | 2.39 | 0.49 | 0.67 | 1.42 | 4.1 | 0.004 | 0.87 | 0.0 | 0.05 | 17.06 | 0.00 | 2.498 | 13.62 | 3.99 | 5.2 | 94.2 | 0.7 | 1.23 | 1.64 | 0.53 | 0.74 | 0.90 | 3748 | 454 | 7 | 0 | 9 | 0 | 0 | logfile |
✔ | 9B3T | 44155 | 2025-01-21 | 2024-03-20 | 3.53 | 4.31 | 3.67 | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 18.61 | 0.00 | 2.215 | 11.95 | 2.81 | 3.3 | 96.7 | 0.0 | 0.30 | 0.83 | 0.76 | 1.34 | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 18.40 | 0.00 | 2.286 | 10.34 | 3.58 | 3.1 | 96.9 | 0.0 | 2.26 | 1.48 | 0.84 | 0.82 | 1.03 | 16389 | 2049 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8YR0 | 39532 | 2025-01-25 | 2024-03-20 | 3.06 | 3.79 | 3.10 | 3.5 | 0.004 | 0.67 | 0.0 | 0.04 | 18.96 | 0.01 | 2.200 | 5.40 | 0.13 | 2.2 | 97.8 | 0.0 | 0.91 | 0.78 | 0.84 | 1.02 | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 16.18 | 0.00 | 2.459 | 4.31 | 2.56 | 2.2 | 97.8 | 0.0 | 1.89 | 0.58 | 0.80 | 0.89 | 1.28 | 23128 | 3084 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 8YQX | 39509 | 2025-01-14 | 2024-03-20 | 2.97 | 3.17 | 3.00 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.27 | 0.00 | 2.198 | 8.03 | 0.72 | 3.7 | 96.3 | 0.0 | -0.18 | 0.56 | 0.85 | 2.68 | 3.2 | 0.005 | 0.60 | 0.0 | 0.05 | 16.99 | 0.00 | 2.451 | 6.91 | 3.33 | 4.2 | 95.8 | 0.0 | -0.15 | 0.31 | 0.55 | 0.86 | 2.39 | 6167 | 766 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 9B41 | 44164 | 2025-01-17 | 2024-03-20 | 3.2 | 3.57 | 3.20 | 3.5 | 0.004 | 0.79 | 0.0 | 0.05 | 17.58 | 0.01 | 2.202 | 6.83 | 0.89 | 5.7 | 94.3 | 0.0 | -0.45 | 0.75 | 0.86 | 2.02 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 18.04 | 0.00 | 2.485 | 7.93 | 3.23 | 5.6 | 94.4 | 0.0 | 0.43 | 1.38 | 0.75 | 0.86 | 1.72 | 55608 | 7080 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 9B4F | 44179 | 2025-01-14 | 2024-03-20 | 3.27 | 3.55 | 3.32 | 3.6 | 0.003 | 0.57 | 2.0 | 0.04 | 12.09 | 0.00 | 2.032 | 7.44 | 1.68 | 9.1 | 90.9 | 0.0 | -2.07 | 0.58 | 0.80 | 3.31 | 3.6 | 0.002 | 0.52 | 0.0 | 0.04 | 14.47 | 0.00 | 2.583 | 4.48 | 1.51 | 7.1 | 92.9 | 0.0 | 1.37 | 0.84 | 0.51 | 0.78 | 2.94 | 5612 | 670 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8YQQ | 39502 | 2025-01-14 | 2024-03-19 | 3.95 | 2.96 | 3.87 | 3.4 | 0.008 | 1.28 | 0.0 | 0.07 | 17.14 | 0.04 | 1.447 | 16.88 | 8.03 | 9.9 | 87.3 | 2.8 | -3.12 | 0.87 | 0.83 | 2.44 | 3.4 | 0.003 | 0.71 | 0.0 | 0.05 | 15.68 | 0.00 | 2.016 | 7.39 | 2.79 | 5.9 | 94.1 | 0.0 | -1.43 | 0.96 | 0.88 | 0.84 | 2.57 | 5141 | 649 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 9B3D | 44135 | 2025-01-25 | 2024-03-19 | 3.41 | 4.16 | 3.57 | 3.8 | 0.005 | 0.88 | 0.0 | 0.05 | 15.33 | 0.01 | 2.099 | 1.98 | 0.00 | 3.7 | 96.2 | 0.1 | -3.30 | 0.79 | 0.76 | 1.16 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 15.98 | 0.00 | 1.883 | 9.39 | 0.98 | 3.5 | 96.5 | 0.1 | 0.50 | 0.79 | 0.80 | 0.80 | 1.22 | 23621 | 2967 | 14 | 0 | 12 | 0 | 0 | logfile |
✔ | 9EPo | 19881 | 2025-01-14 | 2024-03-19 | 1.9 | 2.08 | 1.97 | 2.1 | 0.005 | 0.86 | 0.0 | 0.06 | 10.14 | 0.01 | 2.140 | 1.04 | 0.00 | 0.3 | 99.7 | 0.0 | 1.04 | 0.41 | 0.58 | 5.97 | 2.1 | 0.004 | 0.63 | 0.0 | 0.04 | 15.94 | 0.00 | 2.561 | 4.23 | 2.55 | 0.6 | 99.4 | 0.0 | 2.18 | 1.64 | 0.67 | 0.83 | 5.40 | 5860 | 692 | 6 | 0 | 6 | 94 | 0 | logfile |
✔ | 9EPR | 19884 | 2025-01-14 | 2024-03-19 | 4.9 | 4.87 | 4.71 | 4.7 | 0.004 | 0.93 | 0.0 | 0.05 | 17.43 | 0.01 | 2.296 | 13.12 | 14.42 | 7.8 | 91.8 | 0.5 | -3.94 | 0.67 | 0.73 | — | 4.7 | 0.003 | 0.73 | 0.0 | 0.04 | 12.72 | 0.00 | 2.502 | 12.91 | 0.00 | 5.7 | 94.3 | 0.0 | -1.13 | 3.80 | 0.66 | 0.72 | — | 7046 | 890 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9B3L | 44144 | 2025-01-13 | 2024-03-19 | 3.25 | 3.40 | 3.16 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 15.96 | 0.00 | 2.274 | 9.17 | 0.40 | 2.6 | 97.4 | 0.0 | 2.14 | 0.61 | 0.84 | 1.47 | 3.4 | 0.004 | 0.66 | 0.0 | 0.04 | 16.28 | 0.00 | 2.550 | 9.36 | 6.32 | 2.3 | 97.7 | 0.0 | 2.24 | 0.41 | 0.60 | 0.84 | 1.68 | 2623 | 358 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9B3M | 44145 | 2025-01-13 | 2024-03-19 | 3.21 | 3.37 | 3.16 | 3.4 | 0.004 | 0.76 | 1.0 | 0.04 | 16.77 | 0.00 | 2.215 | 12.22 | 2.33 | 1.1 | 98.9 | 0.0 | 2.89 | 0.61 | 0.83 | 1.19 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 17.01 | 0.00 | 2.568 | 10.91 | 6.61 | 1.4 | 98.6 | 0.0 | 3.21 | 0.28 | 0.61 | 0.84 | 1.28 | 2669 | 365 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 9B3P | 44148 | 2025-01-17 | 2024-03-19 | 3.0 | 2.71 | 3.02 | 3.0 | 0.002 | 0.37 | 0.0 | 0.03 | 24.09 | 0.00 | 2.292 | 3.54 | 0.16 | 4.6 | 94.9 | 0.6 | -5.86 | 0.70 | 0.70 | 1.67 | 2.9 | 0.005 | 0.64 | 0.0 | 0.04 | 27.70 | 0.00 | 2.521 | 5.14 | 2.30 | 3.5 | 96.5 | 0.0 | 1.23 | 0.99 | 0.81 | 0.86 | 3.74 | 11067 | 738 | 10 | 256 | 0 | 0 | 0 | logfile |
✔ | 9B3i | 44141 | 2025-01-20 | 2024-03-19 | 2.88 | 3.47 | — | 3.0 | 0.006 | 0.78 | 0.0 | 0.05 | 13.83 | 0.00 | 1.769 | 10.80 | 0.30 | 1.8 | 98.2 | 0.0 | 0.61 | 0.82 | 0.73 | 2.51 | 3.1 | 0.004 | 0.82 | 0.0 | 0.04 | 15.88 | 0.00 | 1.862 | 11.64 | 1.97 | 1.7 | 98.3 | 0.0 | 1.24 | 0.99 | 0.81 | 0.80 | 2.13 | 14951 | 1854 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 8YPT | 39493 | 2025-01-25 | 2024-03-18 | 3.05 | 3.26 | 3.06 | 3.3 | 0.003 | 0.59 | 0.0 | 0.05 | 15.68 | 0.00 | 2.167 | 7.27 | 0.80 | 1.9 | 98.1 | 0.0 | 0.24 | 0.68 | 0.84 | 3.33 | 3.3 | 0.003 | 0.52 | 0.0 | 0.04 | 16.21 | 0.00 | 2.536 | 4.47 | 3.23 | 2.4 | 97.6 | 0.0 | 0.32 | 1.21 | 0.72 | 0.87 | 3.52 | 23068 | 2894 | 5 | 0 | 0 | 0 | 0 | logfile |