Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7QXA	14196	2024-02-16	2022-01-26	3.2	3.14	3.21	3.2	0.010	1.18	0.0	0.09	22.12	0.01	2.254	0.91	0.28	6.0	93.6	0.4	-3.16	0.69	0.71	3.06	3.1	0.006	0.74	0.0	0.04	22.16	0.01	2.103	10.49	1.77	5.7	94.2	0.1	-0.39	0.72	0.75	0.81	2.58	15576	1247	6	265	0	0	0	logfile
✔	7WQW	32714	2024-02-13	2022-01-26	3.2	3.57	—	3.4	0.003	0.49	0.0	0.04	10.25	0.00	2.272	8.99	4.47	6.7	93.3	0.0	-4.30	0.77	0.75	2.23	3.5	0.003	0.65	0.0	0.04	14.65	0.00	2.185	13.61	2.82	9.3	90.7	0.0	-2.58	1.40	0.79	0.79	2.55	3983	496	4	0	9	0	0	logfile
✔	7WRA	32720	2024-02-21	2022-01-26	2.98	3.19	—	3.3	0.006	0.99	0.0	0.05	10.56	0.01	2.231	6.76	0.60	6.0	94.0	0.0	-3.96	0.69	0.78	2.10	3.2	0.004	0.72	0.0	0.04	15.62	0.00	2.137	13.56	2.16	5.8	94.2	0.0	-0.38	0.87	0.70	0.81	1.61	30373	3720	5	0	1	0	0	logfile
✔	7WRB	32721	2024-02-21	2022-01-26	2.88	3.16	—	3.3	0.006	1.01	0.0	0.05	10.44	0.01	2.276	6.29	0.12	6.0	93.9	0.1	-3.78	0.70	0.79	2.33	3.3	0.005	0.81	0.0	0.05	16.08	0.00	2.214	14.57	2.67	4.8	95.2	0.0	0.28	0.91	0.70	0.83	2.05	30376	3720	8	0	4	0	0	logfile
✔	7WRi	32727	2024-02-13	2022-01-26	3.03	3.18	—	3.2	0.003	0.58	1.0	0.04	15.54	0.00	2.099	6.76	2.03	6.0	94.0	0.0	-4.19	0.73	0.80	2.23	3.1	0.003	0.59	0.0	0.04	16.73	0.00	1.994	7.95	2.61	7.5	92.5	0.0	-0.85	0.39	0.75	0.83	1.67	6431	790	4	0	2	0	0	logfile
✔	7WR7	32717	2024-02-13	2022-01-26	3.1	3.81	—	3.8	0.004	0.61	0.0	0.04	10.28	0.00	2.309	10.13	3.29	9.1	90.9	0.0	-4.53	0.72	0.72	2.80	3.8	0.003	0.66	0.0	0.05	14.03	0.00	2.176	11.67	2.82	10.4	89.6	0.0	-2.48	0.69	0.71	0.74	2.53	3995	496	4	0	10	0	0	logfile
✔	7WQZ	32716	2024-02-13	2022-01-26	3.7	4.25	—	4.0	0.003	0.54	0.0	0.04	10.73	0.00	2.272	9.90	2.13	8.5	91.5	0.0	-4.46	0.81	0.74	1.55	4.1	0.003	0.79	0.0	0.05	13.84	0.00	2.120	19.16	3.79	12.0	88.0	0.0	-2.84	0.74	0.83	0.78	1.74	3974	496	4	0	9	0	0	logfile
✔	7WRC	32722	2024-02-21	2022-01-26	3.21	3.55	—	3.4	0.010	1.07	0.0	0.06	10.59	0.01	2.235	5.92	0.12	7.0	93.0	0.0	-3.90	0.71	0.77	2.04	3.4	0.005	0.78	2.0	0.04	14.80	0.00	1.949	12.99	2.46	5.4	94.6	0.0	0.49	1.72	0.73	0.83	1.71	30468	3720	8	0	8	0	0	logfile
✔	7WRF	32725	2024-02-21	2022-01-26	3.04	3.32	—	3.3	0.008	0.99	0.0	0.06	10.46	0.01	2.294	4.47	0.12	6.2	93.8	0.0	-3.74	0.71	0.81	3.17	3.3	0.007	0.74	0.0	0.04	15.24	0.00	2.139	11.54	2.40	6.7	93.3	0.0	0.19	0.79	0.72	0.85	2.67	30469	3720	8	0	9	0	0	logfile
✔	7WRD	32723	2024-02-21	2022-01-26	2.98	3.14	—	3.3	0.009	1.08	0.0	0.06	10.61	0.01	2.242	5.21	0.12	5.8	94.0	0.2	-3.61	0.68	0.80	2.80	3.2	0.003	0.67	0.0	0.04	15.94	0.00	2.156	10.80	2.28	5.5	94.5	0.0	0.64	1.34	0.67	0.82	2.23	30468	3720	8	0	8	0	0	logfile
✔	7TPT	26063	2024-02-25	2022-01-26	3.9	2.60	3.92	3.8	0.009	0.90	5.0	0.05	14.37	0.00	1.331	10.02	0.45	4.0	96.0	0.0	1.17	0.68	0.61	1.18	2.3	0.007	1.06	2.0	0.05	16.73	0.01	1.742	20.66	4.63	8.6	91.3	0.0	-1.51	0.74	0.72	0.68	1.54	50755	7217	52	0	47	0	0	logfile
✔	7TQD	26066	2024-02-14	2022-01-26	2.9	3.57	2.94	3.4	0.003	0.52	0.0	0.04	12.10	0.00	1.960	3.21	0.00	2.0	98.0	0.0	0.95	0.80	0.82	3.99	3.4	0.003	0.61	0.0	0.04	14.85	0.00	1.062	4.49	0.99	1.9	98.1	0.0	0.85	2.47	0.81	0.83	3.66	8690	1096	3	0	5	0	0	logfile
✔	7QXN	14201	2024-02-23	2022-01-26	3.7	4.15	—	4.0	0.006	1.03	6.0	0.06	11.79	0.01	1.725	12.46	1.38	9.0	90.6	0.5	-4.47	0.72	0.61	1.42	4.0	0.003	0.75	0.0	0.04	14.88	0.00	1.929	13.67	2.18	7.6	92.3	0.1	-0.77	1.66	0.80	0.83	1.22	103713	13349	53	0	12	0	0	logfile
✔	7TQS	26068	2024-02-22	2022-01-26	3.9	4.01	3.74	4.0	0.021	1.80	1.0	0.10	9.83	0.01	2.363	1.22	0.00	1.7	98.3	0.0	0.58	0.50	0.83	3.31	3.9	0.005	0.85	1.0	0.05	15.88	0.00	1.715	20.59	5.32	4.4	95.6	0.0	-0.68	1.31	0.48	0.84	2.59	34113	4249	27	0	207	0	0	logfile
✔	7QXB	14197	2024-02-17	2022-01-26	3.9	4.10	3.83	3.4	0.010	1.46	6.0	0.10	22.18	0.01	2.203	7.40	0.47	4.6	95.0	0.3	-2.07	0.78	0.73	0.86	3.4	0.003	0.73	0.0	0.04	23.12	0.00	2.058	15.86	2.99	4.6	95.4	0.1	-0.28	1.45	0.78	0.72	0.65	17053	1494	7	278	0	0	0	logfile
✔	7TQL	26067	2024-02-19	2022-01-26	3.2	2.54	3.55	2.8	0.012	1.50	15.0	0.11	21.71	0.00	0.514	4.09	1.16	6.6	92.8	0.6	-2.65	0.71	0.76	2.00	2.8	0.005	0.68	0.0	0.04	22.18	0.00	2.093	11.00	4.40	5.5	94.4	0.1	-0.46	0.45	0.79	0.81	1.69	80976	5508	43	1731	5	0	0	logfile
✔	7WR9	32719	2024-02-13	2022-01-26	3.24	3.43	—	3.4	0.006	1.05	1.0	0.06	17.10	0.01	2.350	3.92	1.15	9.6	89.9	0.5	-2.72	0.56	0.81	3.11	3.4	0.003	0.63	0.0	0.04	15.43	0.01	2.177	5.49	3.45	7.7	92.1	0.2	-1.61	0.34	0.57	0.83	2.38	3266	411	5	0	5	0	0	logfile
✔	7QXP	14202	2024-02-23	2022-01-26	3.6	4.06	—	3.9	0.006	1.05	2.0	0.06	12.00	0.01	1.158	13.98	1.79	9.1	90.3	0.6	-4.34	0.74	0.74	1.36	3.9	0.005	0.80	1.0	0.05	15.23	0.00	1.848	14.63	2.36	8.7	91.2	0.1	-0.93	1.65	0.79	0.84	1.46	103732	13349	53	0	12	0	0	logfile
✔	7WQX	32715	2024-02-13	2022-01-26	2.7	2.26	—	3.2	0.003	0.53	0.0	0.04	11.77	0.00	2.181	9.03	2.56	6.0	94.0	0.0	-3.61	0.73	0.65	2.93	3.2	0.003	0.71	0.0	0.05	14.33	0.00	2.191	14.76	2.33	7.2	92.8	0.0	-1.64	0.83	0.76	0.69	2.01	4022	501	1	0	9	0	0	logfile
✔	7QXi	14200	2024-02-20	2022-01-26	3.4	3.81	—	3.7	0.006	0.96	10.0	0.06	15.02	0.00	2.078	17.65	11.21	7.4	91.9	0.8	-3.87	0.82	0.77	1.09	3.7	0.006	0.91	1.0	0.05	17.28	0.00	1.764	13.72	4.41	9.5	90.5	0.1	-1.68	1.44	0.84	0.84	1.42	28928	3683	8	72	0	0	0	logfile

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