Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7TPA	26050	2024-02-18	2022-01-25	3.6	3.99	—	3.6	0.013	1.75	3.0	0.10	12.53	0.01	2.510	0.00	1.11	6.5	92.8	0.8	-1.19	0.84	0.85	2.96	3.6	0.006	0.68	0.0	0.04	12.98	0.00	2.116	5.67	1.23	5.7	94.1	0.2	-0.01	0.47	0.84	0.86	2.67	23199	2983	18	0	58	0	0	logfile
✔	7TPL	26059	2024-02-17	2022-01-25	3.87	4.36	—	3.8	0.013	1.79	10.0	0.10	13.64	0.02	2.519	0.40	1.94	8.6	90.3	1.1	-1.79	0.84	0.83	2.53	3.8	0.004	0.69	0.0	0.04	14.21	0.00	2.055	9.74	1.67	7.4	92.5	0.1	-0.33	0.55	0.84	0.83	1.64	19992	2485	18	0	46	0	0	logfile
✔	7TPJ	26057	2024-02-13	2022-01-25	3.46	3.68	—	3.7	0.004	0.70	0.0	0.04	14.42	0.01	2.159	9.09	0.00	5.0	95.0	0.0	-0.01	0.57	0.69	1.76	3.7	0.003	0.62	0.0	0.04	16.48	0.00	2.253	8.15	1.60	5.0	95.0	0.0	0.73	1.42	0.60	0.72	1.81	4758	626	3	0	0	0	0	logfile
✔	7ToY	26041	2024-02-19	2022-01-24	3.53	3.95	—	3.5	0.014	1.77	4.0	0.10	13.12	0.01	2.517	0.08	1.50	6.8	92.8	0.4	-1.10	0.85	0.84	2.97	3.5	0.003	0.61	0.0	0.04	13.60	0.00	2.178	6.39	1.54	4.5	95.4	0.1	0.26	0.49	0.85	0.85	2.07	24673	3049	20	0	61	0	0	logfile
✔	7WQ4	32699	2024-02-14	2022-01-24	2.6	2.77	—	2.9	0.007	0.61	0.0	0.05	8.52	0.00	1.399	6.69	0.45	0.8	99.2	0.0	-1.07	0.51	0.70	3.03	2.8	0.002	0.53	0.0	0.04	15.26	0.00	2.169	5.37	1.91	1.5	98.5	0.0	0.95	1.25	0.64	0.83	3.52	8290	1048	7	0	2	0	0	logfile
✔	7ToE	26030	2024-02-16	2022-01-24	3.0	3.29	—	3.3	0.003	0.59	0.0	0.04	14.04	0.00	2.201	8.94	0.12	3.9	96.0	0.1	-0.13	0.72	0.83	3.59	3.3	0.003	0.60	0.0	0.04	16.95	0.00	2.133	10.14	1.59	4.0	96.0	0.0	-0.17	0.47	0.74	0.87	3.22	15100	1868	4	0	0	0	0	logfile
✔	7WPo	32686	2024-02-13	2022-01-24	3.5	3.78	—	3.7	0.014	1.64	6.0	0.11	11.40	0.01	2.359	5.22	0.48	2.6	97.3	0.1	-0.13	0.70	0.79	3.06	3.7	0.003	0.61	0.0	0.04	13.68	0.00	2.254	6.45	1.93	1.6	98.4	0.0	2.28	1.77	0.69	0.84	2.23	6829	867	8	0	17	0	0	logfile
✔	7ToX	26040	2024-02-19	2022-01-24	3.62	4.01	—	3.6	0.014	1.76	1.0	0.10	13.09	0.01	2.515	0.14	1.35	6.7	92.8	0.5	-1.12	0.85	0.84	2.42	3.6	0.003	0.59	0.0	0.04	13.61	0.00	2.182	6.38	1.35	4.2	95.7	0.1	0.23	0.49	0.85	0.85	2.07	24618	3041	20	0	61	0	0	logfile
✔	7ToV	26039	2024-02-18	2022-01-24	3.16	3.39	—	3.2	0.014	1.80	5.0	0.10	12.15	0.01	2.515	0.07	0.89	5.8	93.7	0.4	-0.81	0.83	0.86	4.13	3.2	0.003	0.59	0.0	0.04	12.81	0.00	2.114	4.23	1.11	4.0	95.9	0.1	0.33	1.19	0.84	0.87	3.32	23199	2983	18	0	58	0	0	logfile
✔	7WPS	32690	2024-02-18	2022-01-24	4.32	4.69	—	4.2	0.007	0.92	0.0	0.06	10.40	0.01	1.790	3.99	0.35	10.0	89.8	0.2	-4.55	0.72	0.47	—	4.1	0.003	0.71	0.0	0.04	11.69	0.00	2.131	13.10	0.12	6.9	93.1	0.0	-1.85	2.69	0.91	0.79	—	127624	16646	56	0	98	0	0	logfile
✔	7ToF	26031	2024-02-13	2022-01-24	3.7	3.97	—	4.0	0.003	0.60	0.0	0.04	15.20	0.01	2.163	16.14	0.12	4.4	95.6	0.0	-0.60	0.67	0.64	1.86	4.0	0.004	0.73	0.0	0.05	17.50	0.00	2.168	19.65	1.95	4.8	95.2	0.0	-0.77	0.65	0.69	0.66	1.29	7588	938	2	0	0	0	0	logfile
✔	7WPP	32687	2024-02-17	2022-01-24	2.85	2.43	—	2.8	0.009	1.17	0.0	0.14	10.81	0.01	2.041	3.55	0.74	10.0	89.9	0.1	-4.29	0.70	0.74	3.42	2.8	0.004	0.75	0.0	0.05	16.42	0.00	2.090	7.46	3.48	6.7	93.3	0.0	-1.40	1.48	0.74	0.83	3.54	18252	2372	8	0	16	0	0	logfile
✔	7WPQ	32688	2024-02-23	2022-01-24	3.267	3.39	—	3.3	0.007	0.93	0.0	0.06	10.51	0.01	2.022	3.07	0.29	10.0	89.7	0.3	-4.59	0.77	0.75	2.77	3.3	0.003	0.70	0.0	0.04	15.09	0.00	2.120	8.26	2.45	6.6	93.4	0.0	-2.21	2.36	0.79	0.78	2.34	36576	4756	16	0	36	0	0	logfile
✔	7WPR	32689	2024-02-26	2022-01-24	4.39	5.44	—	4.2	0.007	0.95	0.0	0.05	10.38	0.01	1.865	4.30	0.17	9.6	90.2	0.2	-4.16	0.90	0.77	—	4.2	0.003	0.73	0.0	0.04	11.52	0.00	2.070	18.39	0.10	8.5	91.5	0.0	-1.90	2.38	0.91	0.79	—	145764	19024	64	0	98	0	0	logfile
✔	7TP1	26045	2024-02-19	2022-01-24	3.81	4.30	—	3.8	0.014	1.75	5.0	0.10	13.20	0.01	2.523	0.21	1.39	6.7	92.4	0.9	-1.32	0.85	0.84	1.81	3.8	0.005	0.67	0.0	0.04	13.49	0.00	2.050	8.51	1.05	5.3	94.7	0.0	0.03	1.19	0.86	0.85	1.62	24646	3046	20	0	61	0	0	logfile
✔	7ToZ	26042	2024-02-19	2022-01-24	4.07	4.80	—	4.0	0.014	1.84	11.0	0.10	14.63	0.02	2.509	0.68	2.87	8.7	90.4	0.8	-1.96	0.85	0.79	—	4.0	0.004	0.72	0.0	0.04	13.01	0.00	2.090	15.63	0.00	7.6	92.4	0.1	-0.83	0.56	0.85	0.80	—	24470	3026	20	0	60	0	0	logfile
✔	7ToU	26038	2024-02-19	2022-01-24	3.24	3.49	—	3.3	0.014	1.82	8.0	0.11	12.99	0.01	2.517	0.18	1.20	6.2	93.2	0.7	-1.00	0.84	0.85	3.52	3.3	0.003	0.61	0.0	0.04	13.38	0.00	2.126	5.32	1.31	4.4	95.6	0.0	0.39	0.57	0.86	0.87	2.66	24687	3050	20	0	61	0	0	logfile
✔	7WPZ	32693	2024-02-13	2022-01-24	3.8	3.48	—	3.6	0.013	1.41	1.0	0.11	11.15	0.01	2.431	1.73	0.74	2.2	97.4	0.4	-0.13	0.75	0.74	2.80	3.6	0.003	0.60	0.0	0.04	12.91	0.00	2.208	5.00	1.49	3.1	96.9	0.0	1.47	1.39	0.79	0.80	2.30	5756	787	8	0	15	0	0	logfile
✔	7TP0	26043	2024-02-19	2022-01-24	3.57	3.99	—	3.6	0.014	1.76	4.0	0.10	13.12	0.01	2.527	0.27	1.62	6.6	92.6	0.8	-1.08	0.85	0.85	2.66	3.6	0.005	0.66	0.0	0.04	13.44	0.00	2.011	6.96	1.13	5.5	94.3	0.2	0.10	1.18	0.86	0.86	2.26	24589	3040	20	0	61	0	0	logfile
✔	7WQ3	32698	2024-02-14	2022-01-24	2.7	2.90	—	3.2	0.011	0.72	0.0	0.06	9.42	0.00	2.189	5.16	0.40	1.0	99.0	0.0	-1.34	0.39	0.47	0.48	3.0	0.002	0.56	0.0	0.04	15.09	0.00	2.207	5.97	3.95	2.2	97.8	0.0	1.08	1.87	0.63	0.82	2.99	9209	1160	7	0	5	0	0	logfile

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