Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7WP6	32676	2024-02-13	2022-01-23	3.81	4.11	—	4.1	0.008	1.07	0.0	0.06	14.82	0.01	2.224	7.27	0.69	9.4	90.4	0.1	-3.82	0.70	0.79	2.25	4.1	0.004	0.76	0.0	0.04	16.71	0.00	2.170	14.85	6.58	8.4	91.5	0.1	-2.09	1.30	0.70	0.79	1.56	6748	861	9	0	3	0	0	logfile
✔	7WPE	32684	2024-02-21	2022-01-23	2.69	2.24	—	1.9	0.003	0.61	3.0	0.08	13.02	0.00	1.889	4.63	0.12	3.2	96.8	0.0	0.32	0.73	0.76	3.30	1.9	0.008	0.81	2.0	0.08	14.58	0.01	1.770	8.16	2.13	4.0	96.0	0.0	-0.02	0.92	0.76	0.81	3.10	32038	4187	14	0	40	0	0	logfile
✔	7WPB	32681	2024-02-13	2022-01-23	2.79	2.94	—	2.9	0.005	0.74	0.0	0.05	15.21	0.01	2.101	3.78	0.29	3.0	97.0	0.0	-4.67	0.68	0.86	4.00	2.9	0.003	0.58	0.0	0.04	16.70	0.00	2.026	9.14	1.72	2.3	97.7	0.0	0.18	0.46	0.70	0.88	3.56	6491	793	2	0	5	0	0	logfile
✔	7WPC	32682	2024-02-13	2022-01-23	2.57	2.17	—	2.0	0.004	0.72	0.0	0.05	17.02	0.01	2.253	2.54	0.12	4.2	95.8	0.0	-4.19	0.69	0.72	2.24	1.9	0.003	0.62	0.0	0.04	17.25	0.00	2.013	8.70	1.62	3.9	96.1	0.0	-0.82	1.32	0.74	0.81	2.96	8057	980	6	0	9	0	0	logfile
✔	7WP9	32679	2024-02-19	2022-01-23	2.56	2.20	—	1.9	0.004	0.78	1.0	0.05	14.32	0.01	2.294	4.05	0.40	4.9	95.0	0.1	-4.01	0.71	0.72	2.33	2.0	0.005	0.64	0.0	0.05	16.07	0.00	2.071	8.81	2.50	5.3	94.7	0.0	-1.50	1.00	0.76	0.81	2.54	25077	3141	13	0	28	0	0	logfile
✔	7WPA	32680	2024-02-21	2022-01-23	2.77	2.26	—	2.1	0.004	0.78	2.0	0.05	13.93	0.01	2.327	3.39	0.45	5.4	94.5	0.0	-4.08	0.72	0.73	2.35	2.0	0.004	0.65	0.0	0.04	15.97	0.00	2.069	8.93	3.14	5.2	94.8	0.0	-1.29	0.63	0.76	0.81	2.92	30444	3774	20	0	47	0	0	logfile
✔	7WPF	32685	2024-02-23	2022-01-23	2.92	2.31	—	2.1	0.003	0.68	10.0	0.09	11.68	0.00	2.025	5.35	0.03	4.1	95.9	0.0	-0.16	0.65	0.65	2.36	2.0	0.004	0.67	0.0	0.05	14.41	0.00	2.154	9.62	2.74	5.1	94.9	0.0	-0.43	0.50	0.67	0.71	2.21	36202	4743	17	0	39	0	0	logfile
✔	7WPD	32683	2024-02-20	2022-01-23	3.18	2.39	—	2.1	0.003	0.56	2.0	0.08	12.30	0.00	1.866	5.06	0.03	3.1	96.9	0.0	0.82	0.68	0.69	2.15	2.1	0.003	0.62	0.0	0.05	14.27	0.00	2.072	8.34	2.23	3.6	96.4	0.0	0.14	0.51	0.71	0.75	2.13	27762	3628	11	0	37	0	0	logfile
✔	7WP8	32678	2024-02-13	2022-01-23	3.88	4.14	—	4.1	0.008	1.01	2.0	0.11	14.51	0.01	2.250	7.91	0.00	9.0	90.9	0.1	-4.12	0.69	0.80	2.68	4.0	0.003	0.70	0.0	0.05	16.35	0.00	2.163	14.01	2.05	7.1	92.9	0.0	-2.73	2.40	0.69	0.79	2.18	6797	861	9	0	3	0	0	logfile
✔	7WoV	32660	2024-02-22	2022-01-22	3.87	2.62	—	2.1	0.003	0.54	0.0	0.04	9.47	0.01	2.137	8.14	5.98	8.0	91.8	0.2	-4.25	0.67	0.66	1.83	2.1	0.005	0.76	0.0	0.05	13.67	0.00	2.087	15.22	5.48	12.2	87.8	0.0	-2.83	0.77	0.69	0.69	1.74	34884	4505	12	0	18	0	0	logfile
✔	7WoP	32654	2024-02-13	2022-01-22	3.51	2.51	—	3.4	0.002	0.54	0.0	0.04	10.83	0.00	2.203	10.97	9.21	11.4	88.6	0.0	-4.81	0.64	0.66	1.96	3.4	0.004	0.76	0.0	0.05	15.06	0.00	2.071	19.23	6.32	17.6	82.4	0.0	-3.81	1.27	0.65	0.69	2.18	5107	669	3	0	0	0	0	logfile
✔	7WoU	32659	2024-02-21	2022-01-22	3.47	2.44	—	2.1	0.003	0.57	0.0	0.04	9.57	0.01	2.208	8.19	5.49	8.0	92.0	0.0	-4.25	0.67	0.67	2.06	2.2	0.007	0.87	2.0	0.05	13.84	0.01	1.975	13.23	4.00	10.0	90.0	0.0	-2.49	1.27	0.70	0.75	2.19	31397	4029	10	0	23	0	0	logfile
✔	7To3	26028	2024-02-16	2022-01-22	2.74	3.49	2.83	3.3	0.002	0.54	0.0	0.04	12.12	0.00	2.062	3.20	0.00	1.9	98.1	0.0	0.85	0.83	0.85	3.77	3.3	0.003	0.58	0.0	0.04	14.07	0.00	1.087	4.40	0.90	1.7	98.3	0.0	0.84	1.33	0.82	0.85	3.93	14764	1850	6	0	10	0	0	logfile
✔	7WoT	32658	2024-02-19	2022-01-22	3.73	4.26	—	3.8	0.010	1.69	284.0	0.10	15.82	0.01	1.016	24.03	4.41	9.4	88.4	2.2	-3.07	0.49	0.33	0.06	3.9	0.003	0.82	0.0	0.04	16.50	0.00	2.072	17.00	2.33	8.0	91.7	0.3	-0.70	1.09	0.55	0.43	0.17	133827	17285	24	0	0	0	0	logfile
✔	7TNX	26022	2024-02-13	2022-01-22	3.54	3.76	—	3.8	0.011	1.08	0.0	0.06	15.46	0.00	2.247	6.37	0.17	7.7	92.2	0.2	-2.75	0.70	0.80	2.39	3.8	0.002	0.55	0.0	0.04	16.95	0.00	2.247	8.05	2.23	5.8	94.2	0.0	0.17	0.47	0.66	0.77	2.52	5753	647	4	23	2	0	0	logfile
✔	7To2	26027	2024-02-13	2022-01-22	3.2	3.55	—	3.5	0.011	1.13	0.0	0.07	15.50	0.00	2.284	5.58	0.84	5.0	95.0	0.0	-1.96	0.80	0.85	2.46	3.5	0.003	0.53	0.0	0.04	16.99	0.00	2.203	7.52	1.34	4.7	95.3	0.0	0.55	0.38	0.78	0.86	2.44	6052	670	3	30	3	0	0	logfile
✔	7To4	26029	2024-02-20	2022-01-22	3.4	2.97	—	2.1	0.015	1.90	20.0	0.13	16.22	0.01	2.009	5.62	2.60	7.2	92.0	0.8	-2.22	0.85	0.82	2.79	2.1	0.006	0.97	2.0	0.05	15.02	0.01	2.062	13.64	3.83	5.8	94.2	0.0	-0.47	0.70	0.86	0.83	2.40	27672	3350	35	0	101	0	0	logfile
✔	7Woo	32653	2024-02-16	2022-01-22	3.71	4.08	—	3.9	0.010	1.69	139.0	0.10	15.86	0.01	1.041	23.12	4.33	9.3	88.5	2.2	-3.11	0.47	0.44	0.31	3.9	0.005	0.90	2.0	0.04	16.67	0.01	1.952	19.85	3.59	9.5	90.2	0.4	-0.73	1.62	0.48	0.45	0.18	66949	8644	12	0	0	0	0	logfile
✔	7To0	26025	2024-02-13	2022-01-22	3.5	3.68	—	3.7	0.011	1.17	0.0	0.07	16.44	0.00	2.288	8.07	0.82	7.5	92.5	0.0	-3.00	0.72	0.81	2.21	3.7	0.003	0.57	0.0	0.04	17.86	0.00	2.115	10.96	3.78	8.4	91.6	0.0	-0.41	0.54	0.74	0.82	2.58	5989	682	4	24	1	0	0	logfile
✔	7WoS	32657	2024-02-21	2022-01-22	3.91	3.20	—	3.1	0.003	0.52	1.0	0.04	9.08	0.01	2.210	8.37	5.30	7.0	92.9	0.1	-3.97	0.73	0.71	1.37	3.5	0.003	0.77	0.0	0.05	13.55	0.00	2.055	14.50	3.88	9.5	90.5	0.0	-2.04	1.38	0.75	0.74	1.70	31411	4034	10	0	21	0	0	logfile

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