Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7To3	26028	2024-02-16	2022-01-22	2.74	3.49	2.83	3.3	0.002	0.54	0.0	0.04	12.12	0.00	2.062	3.20	0.00	1.9	98.1	0.0	0.85	0.83	0.85	3.77	3.3	0.003	0.58	0.0	0.04	14.07	0.00	1.087	4.40	0.90	1.7	98.3	0.0	0.84	1.33	0.82	0.85	3.93	14764	1850	6	0	10	0	0	logfile
✔	7TNZ	26024	2024-02-13	2022-01-22	3.54	3.70	—	3.7	0.011	1.17	0.0	0.07	15.33	0.00	2.258	8.16	0.66	6.8	92.8	0.4	-2.66	0.71	0.81	2.02	3.7	0.004	1.03	1.0	0.04	17.41	0.00	2.228	11.98	3.78	7.1	92.9	0.0	-0.52	1.19	0.71	0.80	1.48	5986	680	4	23	2	0	0	logfile
✔	7TNX	26022	2024-02-13	2022-01-22	3.54	3.76	—	3.8	0.011	1.08	0.0	0.06	15.46	0.00	2.247	6.37	0.17	7.7	92.2	0.2	-2.75	0.70	0.80	2.39	3.8	0.002	0.55	0.0	0.04	16.95	0.00	2.247	8.05	2.23	5.8	94.2	0.0	0.17	0.47	0.66	0.77	2.52	5753	647	4	23	2	0	0	logfile
✔	7WoN	32652	2024-02-13	2022-01-22	3.9	4.07	—	4.0	0.006	0.98	0.0	0.06	16.81	0.01	2.035	5.41	0.28	9.8	90.2	0.0	-4.42	0.67	0.83	2.49	4.0	0.005	0.75	0.0	0.05	16.28	0.00	2.109	13.45	5.07	11.2	88.8	0.0	-3.03	0.99	0.68	0.83	2.72	3318	425	4	0	2	0	0	logfile
✔	7WP5	32669	2024-02-13	2022-01-22	3.9	4.08	—	4.0	0.005	1.03	0.0	0.06	13.95	0.01	2.278	4.75	0.56	9.1	90.7	0.2	-4.27	0.59	0.74	2.00	4.0	0.004	0.76	0.0	0.05	16.33	0.00	2.158	13.64	5.32	11.0	88.8	0.2	-2.98	0.62	0.60	0.74	1.28	3340	425	4	0	2	0	0	logfile
✔	7WoP	32654	2024-02-13	2022-01-22	3.51	2.51	—	3.4	0.002	0.54	0.0	0.04	10.83	0.00	2.203	10.97	9.21	11.4	88.6	0.0	-4.81	0.64	0.66	1.96	3.4	0.004	0.76	0.0	0.05	15.06	0.00	2.071	19.23	6.32	17.6	82.4	0.0	-3.81	1.27	0.65	0.69	2.18	5107	669	3	0	0	0	0	logfile
✔	7QVi	14178	2024-02-14	2022-01-21	3.0	3.27	—	3.3	0.005	0.73	0.0	0.04	14.80	0.00	1.960	9.67	0.00	3.3	96.7	0.0	-1.28	0.72	0.88	4.43	3.3	0.005	0.57	0.0	0.04	16.27	0.00	1.879	9.71	1.24	3.5	96.5	0.0	0.45	0.34	0.73	0.89	3.71	56600	7128	32	0	32	0	0	logfile
✔	7QVM	14180	2024-02-14	2022-01-21	3.25	3.83	—	3.6	0.003	0.64	0.0	0.04	12.94	0.00	2.156	11.45	0.00	3.6	96.4	0.0	0.22	0.72	0.78	2.24	3.6	0.003	0.63	0.0	0.04	15.49	0.00	2.150	12.28	2.37	3.6	96.4	0.0	0.46	0.78	0.73	0.81	1.75	8528	1094	6	0	1	0	0	logfile
✔	7TNJ	26011	2024-02-17	2022-01-21	4.02	3.16	—	3.3	0.005	0.94	0.0	0.05	11.63	0.01	2.246	3.87	0.20	3.6	96.4	0.0	-4.89	0.65	0.72	—	3.1	0.003	0.66	0.0	0.04	13.16	0.00	2.161	10.87	0.10	3.5	96.5	0.0	0.45	1.28	0.66	0.74	—	18810	2402	8	0	4	0	0	logfile
✔	7TNL	26013	2024-02-17	2022-01-21	3.59	3.31	—	3.4	0.009	1.03	0.0	0.06	11.86	0.01	2.246	4.01	0.38	4.6	95.1	0.2	-4.39	0.72	0.83	3.45	3.4	0.003	0.61	0.0	0.04	14.95	0.00	2.087	8.82	2.11	4.1	95.9	0.0	0.71	1.12	0.73	0.83	2.67	19434	2486	8	0	4	0	0	logfile
✔	7WoC	32648	2024-02-13	2022-01-21	3.35	3.49	—	3.4	0.002	0.48	0.0	0.04	9.58	0.00	2.288	6.75	4.60	6.3	93.7	0.0	-4.80	0.72	0.76	2.37	3.4	0.004	0.71	0.0	0.05	15.13	0.00	2.163	12.85	4.98	11.5	88.5	0.0	-2.96	1.25	0.75	0.83	2.50	4746	610	4	0	1	0	0	logfile
✔	7QVE	14175	2024-02-25	2022-01-21	3.3	2.47	—	3.1	0.009	0.92	2.0	0.06	13.32	0.00	1.612	10.74	0.76	6.0	93.8	0.2	-0.90	0.76	0.77	2.17	3.0	0.005	0.76	0.0	0.04	17.15	0.00	1.765	13.15	4.05	3.2	96.8	0.0	0.64	1.22	0.79	0.82	2.14	48322	6256	28	0	0	0	0	logfile
✔	7WoA	32646	2024-02-21	2022-01-21	3.25	2.98	—	3.2	0.002	0.45	0.0	0.04	9.46	0.00	2.229	6.56	4.23	3.8	96.2	0.0	-3.46	0.86	0.78	2.52	3.2	0.004	0.67	0.0	0.05	13.98	0.00	2.139	11.13	3.68	7.9	92.1	0.0	-2.07	1.17	0.89	0.85	2.78	31952	4060	10	0	39	0	0	logfile
✔	7QVF	14176	2024-02-13	2022-01-21	3.64	3.54	3.42	4.1	0.012	2.10	22.0	0.12	15.51	0.01	2.525	0.00	0.53	6.0	94.0	0.0	-2.41	0.43	0.77	3.90	3.6	0.007	0.90	0.0	0.06	16.90	0.00	2.078	16.13	3.84	6.8	93.2	0.0	-2.55	3.84	0.39	0.75	3.83	6516	810	6	0	0	0	0	logfile
✔	7WoG	32651	2024-02-13	2022-01-21	4.06	2.95	—	2.0	0.001	0.41	0.0	0.04	8.09	0.00	2.293	10.22	3.78	8.0	92.0	0.0	-3.98	0.51	0.51	—	2.2	0.003	0.72	0.0	0.04	10.77	0.00	2.076	19.52	0.00	12.4	87.6	0.0	-2.57	0.92	0.54	0.54	—	3362	433	3	0	0	0	0	logfile
✔	7TNK	26012	2024-02-17	2022-01-21	4.5	3.85	—	3.8	0.005	1.01	0.0	0.05	11.81	0.01	2.244	4.82	0.40	5.0	94.9	0.1	-4.97	0.71	0.73	—	3.8	0.004	0.67	0.0	0.04	13.07	0.00	2.132	14.12	0.00	5.2	94.8	0.0	-0.22	0.93	0.72	0.74	—	18934	2419	8	0	4	0	0	logfile
✔	7TNo	26016	2024-02-17	2022-01-21	4.02	3.34	—	3.4	0.004	0.94	0.0	0.05	12.11	0.01	2.023	4.43	0.65	3.7	96.1	0.2	-5.12	0.69	0.76	—	3.4	0.003	0.68	0.0	0.04	13.39	0.00	2.155	10.51	0.00	3.3	96.7	0.0	0.06	0.91	0.70	0.77	—	18810	2405	8	0	4	0	0	logfile
✔	7TNN	26015	2024-02-17	2022-01-21	3.91	3.40	—	3.6	0.005	0.92	0.0	0.06	11.69	0.01	2.257	4.06	0.34	2.8	97.1	0.1	-2.09	0.71	0.78	2.40	3.4	0.003	0.63	0.0	0.04	15.58	0.00	2.076	11.49	3.07	4.3	95.7	0.0	0.68	1.42	0.72	0.80	2.07	19439	2486	8	0	4	0	0	logfile
✔	7TNM	26014	2024-02-17	2022-01-21	4.74	3.56	—	3.5	0.007	1.08	0.0	0.06	12.01	0.01	2.214	5.88	0.86	2.6	97.0	0.5	-1.48	0.68	0.68	—	3.5	0.003	0.68	0.0	0.04	12.69	0.00	2.107	14.47	0.00	4.6	95.4	0.0	0.22	1.80	0.69	0.69	—	19448	2486	8	0	4	0	0	logfile
✔	7TNP	26017	2024-02-17	2022-01-21	3.96	3.45	—	3.6	0.008	1.09	0.0	0.06	12.46	0.01	2.280	4.16	0.70	5.4	94.5	0.1	-4.96	0.71	0.76	2.12	3.4	0.004	0.87	1.0	0.04	15.61	0.00	2.120	14.63	3.44	4.7	95.2	0.1	0.08	0.89	0.72	0.77	1.81	18840	2408	8	0	4	0	0	logfile

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