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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oHY | 12913 | 2024-02-17 | 2021-05-11 | 3.9 | 4.70 | 3.99 | 3.1 | 0.002 | 0.44 | 0.0 | 0.03 | 22.64 | 0.00 | 1.780 | 5.59 | 0.61 | 4.2 | 95.8 | 0.0 | 1.53 | 0.82 | 0.72 | 0.73 | 3.2 | 0.007 | 0.68 | 0.0 | 0.04 | 23.53 | 0.00 | 1.714 | 24.22 | 2.34 | 8.6 | 91.4 | 0.1 | -0.81 | 1.74 | 0.85 | 0.80 | 1.12 | 125318 | 4067 | 28 | 1837 | 2 | 0 | 53608 | logfile |
✔ | 7oi9 | 12922 | 2024-02-21 | 2021-05-11 | 3.3 | 3.23 | — | 3.2 | 0.004 | 0.87 | 1.0 | 0.05 | 18.80 | 0.01 | 1.574 | 6.32 | 0.06 | 3.9 | 96.0 | 0.0 | -1.37 | 0.72 | 0.73 | 2.41 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 19.42 | 0.00 | 1.924 | 11.20 | 2.71 | 3.7 | 96.3 | 0.0 | -0.05 | 0.50 | 0.76 | 0.79 | 2.18 | 90599 | 8105 | 60 | 1148 | 52 | 0 | 0 | logfile |
✔ | 7oiC | 12925 | 2024-02-22 | 2021-05-11 | 3.1 | 3.04 | — | 3.0 | 0.014 | 1.27 | 1.0 | 0.11 | 20.54 | 0.01 | 1.916 | 8.15 | 0.13 | 7.7 | 92.2 | 0.1 | -1.98 | 0.75 | 0.78 | 2.96 | 3.0 | 0.006 | 0.80 | 2.0 | 0.05 | 20.73 | 0.01 | 1.790 | 13.07 | 2.37 | 7.1 | 92.8 | 0.0 | -0.51 | 0.33 | 0.76 | 0.81 | 2.30 | 100859 | 8614 | 67 | 1441 | 81 | 0 | 0 | logfile |
✔ | 7oHP | 12904 | 2024-02-23 | 2021-05-11 | 3.9 | 5.25 | 4.02 | 3.0 | 0.005 | 0.54 | 0.0 | 0.03 | 22.32 | 0.00 | 1.733 | 6.18 | 1.01 | 4.3 | 95.5 | 0.2 | 1.17 | 0.80 | 0.64 | 0.37 | 3.1 | 0.005 | 0.68 | 0.0 | 0.04 | 23.08 | 0.00 | 1.793 | 24.53 | 2.62 | 8.6 | 91.4 | 0.0 | -1.16 | 1.73 | 0.83 | 0.74 | 0.43 | 143939 | 5290 | 35 | 1781 | 1 | 0 | 63394 | logfile |
✔ | 7MSH | 23962 | 2024-02-29 | 2021-05-11 | 3.23 | 2.43 | — | 3.0 | 0.008 | 0.89 | 0.0 | 0.05 | 22.51 | 0.01 | 1.993 | 3.36 | 0.06 | 8.8 | 91.1 | 0.1 | -4.94 | 0.80 | 0.81 | 3.38 | 3.0 | 0.007 | 0.72 | 0.0 | 0.04 | 22.43 | 0.01 | 1.769 | 8.74 | 3.25 | 7.8 | 92.1 | 0.0 | -2.19 | 1.15 | 0.80 | 0.82 | 2.42 | 152103 | 6149 | 71 | 4833 | 428 | 0 | 0 | logfile |
✔ | 7oHB | 12899 | 2024-02-15 | 2021-05-10 | 3.4 | 3.61 | — | 3.4 | 0.005 | 0.86 | 0.0 | 0.05 | 28.69 | 0.01 | 2.254 | 4.48 | 0.89 | 2.6 | 97.4 | 0.0 | -2.05 | 0.89 | 0.86 | 3.09 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 27.67 | 0.00 | 2.248 | 11.13 | 1.78 | 2.5 | 97.5 | 0.0 | 1.53 | 1.18 | 0.90 | 0.88 | 2.58 | 13424 | 943 | 11 | 290 | 0 | 0 | 0 | logfile |
✔ | 7MRW | 23959 | 2024-02-19 | 2021-05-10 | 3.72 | 4.05 | — | 4.0 | 0.009 | 1.00 | 0.0 | 0.05 | 9.64 | 0.01 | 2.217 | 5.49 | 0.22 | 3.8 | 96.1 | 0.1 | -4.57 | 0.78 | 0.81 | 2.97 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 14.38 | 0.00 | 1.904 | 12.39 | 2.10 | 2.8 | 97.2 | 0.0 | 0.65 | 1.25 | 0.77 | 0.81 | 1.82 | 24152 | 2887 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oHC | 12900 | 2024-02-15 | 2021-05-10 | 2.5 | 3.15 | — | 2.9 | 0.005 | 0.86 | 0.0 | 0.05 | 29.62 | 0.01 | 2.193 | 4.51 | 0.16 | 1.9 | 98.1 | 0.0 | 0.04 | 0.84 | 0.82 | 3.50 | 2.9 | 0.004 | 0.60 | 0.0 | 0.03 | 28.85 | 0.00 | 2.132 | 8.36 | 2.51 | 2.1 | 97.9 | 0.0 | 2.66 | 1.12 | 0.86 | 0.86 | 3.13 | 12019 | 764 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7oHA | 12898 | 2024-02-16 | 2021-05-09 | 2.9 | 3.29 | — | 3.0 | 0.005 | 0.91 | 1.0 | 0.06 | 25.98 | 0.01 | 2.248 | 5.05 | 0.00 | 1.4 | 98.6 | 0.0 | 0.60 | 0.85 | 0.85 | 2.29 | 3.0 | 0.004 | 0.62 | 0.0 | 0.04 | 25.96 | 0.00 | 2.040 | 11.42 | 2.03 | 1.9 | 98.1 | 0.0 | 2.02 | 1.16 | 0.86 | 0.88 | 2.33 | 14215 | 1159 | 13 | 244 | 0 | 0 | 0 | logfile |
✔ | 7oH9 | 12897 | 2024-02-16 | 2021-05-09 | 3.0 | 3.38 | — | 3.0 | 0.007 | 0.84 | 0.0 | 0.05 | 25.97 | 0.01 | 2.234 | 5.13 | 0.00 | 2.7 | 97.3 | 0.0 | -0.54 | 0.89 | 0.87 | 2.74 | 3.0 | 0.004 | 0.72 | 0.0 | 0.04 | 26.66 | 0.00 | 2.160 | 12.64 | 2.15 | 3.4 | 96.6 | 0.0 | 1.47 | 1.14 | 0.90 | 0.89 | 2.45 | 15099 | 1144 | 13 | 290 | 0 | 0 | 0 | logfile |
✔ | 7MR2 | 23954 | 2024-02-16 | 2021-05-07 | 4.3 | 4.72 | — | 4.5 | 0.003 | 0.75 | 0.0 | 0.05 | 14.96 | 0.01 | 2.257 | 5.77 | 0.00 | 5.1 | 94.9 | 0.0 | -1.32 | 0.90 | 0.84 | — | 4.5 | 0.002 | 0.55 | 0.0 | 0.04 | 14.95 | 0.00 | 2.178 | 9.67 | 0.06 | 4.6 | 95.4 | 0.0 | 0.26 | 0.30 | 0.90 | 0.84 | — | 16671 | 2075 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oGP | 12885 | 2024-02-17 | 2021-05-07 | 3.3 | 3.42 | 3.38 | 3.4 | 0.003 | 0.69 | 0.0 | 0.05 | 14.59 | 0.01 | 2.287 | 3.63 | 0.27 | 4.3 | 95.7 | 0.0 | -4.75 | 0.56 | 0.73 | 1.16 | 3.4 | 0.003 | 0.83 | 2.0 | 0.04 | 16.65 | 0.01 | 2.083 | 8.10 | 2.89 | 5.0 | 94.9 | 0.0 | -1.00 | 0.76 | 0.69 | 0.86 | 1.88 | 17171 | 2144 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7MR1 | 23953 | 2024-02-17 | 2021-05-07 | 4.2 | 4.74 | — | 4.6 | 0.003 | 0.78 | 0.0 | 0.05 | 14.91 | 0.01 | 2.237 | 5.74 | 0.00 | 5.5 | 94.5 | 0.0 | -1.78 | 0.85 | 0.84 | — | 4.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.83 | 0.00 | 2.185 | 10.10 | 0.00 | 5.6 | 94.3 | 0.0 | -0.25 | 0.34 | 0.85 | 0.83 | — | 18473 | 2316 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oH0 | 12890 | 2024-02-13 | 2021-05-07 | 3.9 | 4.55 | — | 4.3 | 0.005 | 0.92 | 0.0 | 0.05 | 13.94 | 0.01 | 2.046 | 29.13 | 0.26 | 11.9 | 87.9 | 0.1 | -5.70 | 0.80 | 0.71 | 1.16 | 4.3 | 0.003 | 0.75 | 0.0 | 0.04 | 15.89 | 0.01 | 2.182 | 22.83 | 4.05 | 9.5 | 90.5 | 0.0 | -3.58 | 2.02 | 0.79 | 0.69 | 0.92 | 6830 | 870 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oGR | 12886 | 2024-02-16 | 2021-05-07 | 3.0 | 3.10 | 2.89 | 3.1 | 0.003 | 0.69 | 0.0 | 0.05 | 13.65 | 0.01 | 2.309 | 3.41 | 0.00 | 5.2 | 94.8 | 0.0 | -4.69 | 0.68 | 0.80 | 2.46 | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 16.37 | 0.00 | 2.163 | 7.03 | 2.23 | 5.7 | 94.3 | 0.0 | -0.90 | 1.02 | 0.69 | 0.84 | 2.59 | 14135 | 1775 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 7MR0 | 23952 | 2024-02-17 | 2021-05-07 | 3.7 | 4.10 | — | 4.0 | 0.003 | 0.81 | 0.0 | 0.05 | 15.13 | 0.01 | 2.284 | 4.14 | 0.44 | 5.8 | 94.2 | 0.0 | -1.82 | 0.84 | 0.82 | 1.66 | 4.0 | 0.002 | 0.56 | 0.0 | 0.04 | 16.25 | 0.00 | 2.202 | 7.15 | 1.46 | 5.8 | 94.2 | 0.0 | 0.00 | 0.31 | 0.84 | 0.83 | 1.81 | 19282 | 2400 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MR3 | 23955 | 2024-02-19 | 2021-05-07 | 3.6 | 4.01 | — | 3.9 | 0.005 | 0.83 | 0.0 | 0.05 | 16.47 | 0.01 | 2.250 | 5.33 | 0.00 | 6.5 | 93.5 | 0.0 | -1.62 | 0.83 | 0.82 | 1.78 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 17.95 | 0.00 | 2.202 | 9.58 | 1.77 | 5.8 | 94.2 | 0.0 | 0.11 | 0.29 | 0.83 | 0.83 | 1.32 | 23615 | 2854 | 5 | 40 | 0 | 0 | 0 | logfile |
✔ | 7MR4 | 23956 | 2024-02-17 | 2021-05-07 | 4.5 | 4.68 | — | 4.5 | 0.004 | 0.86 | 0.0 | 0.05 | 17.06 | 0.01 | 2.014 | 7.21 | 0.00 | 5.4 | 94.6 | 0.0 | -1.71 | 0.82 | 0.81 | — | 4.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.82 | 0.00 | 2.184 | 14.74 | 0.06 | 5.6 | 94.4 | 0.0 | -0.36 | 0.48 | 0.82 | 0.82 | — | 17203 | 2057 | 5 | 33 | 0 | 0 | 0 | logfile |
✔ | 7oGL | 12883 | 2024-02-16 | 2021-05-06 | 3.4 | 3.47 | 3.42 | 3.5 | 0.016 | 1.97 | 20.0 | 0.12 | 13.71 | 0.01 | 2.082 | 6.91 | 1.70 | 4.9 | 95.1 | 0.0 | -1.18 | 0.65 | 0.77 | 2.25 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 15.89 | 0.00 | 2.182 | 5.70 | 2.41 | 3.4 | 96.6 | 0.0 | 0.68 | 0.85 | 0.72 | 0.83 | 2.40 | 14763 | 2079 | 6 | 0 | 0 | 3 | 0 | logfile |
✔ | 7MQo | 23949 | 2024-02-15 | 2021-05-06 | 3.4 | 3.62 | 3.43 | 3.7 | 0.004 | 0.71 | 0.0 | 0.05 | 14.61 | 0.01 | 2.030 | 10.26 | 0.17 | 13.1 | 86.7 | 0.2 | -2.87 | 0.67 | 0.75 | 1.17 | 3.7 | 0.004 | 0.67 | 0.0 | 0.05 | 16.36 | 0.00 | 2.127 | 10.93 | 3.21 | 13.0 | 86.8 | 0.2 | -2.60 | 0.47 | 0.71 | 0.80 | 1.61 | 10642 | 1288 | 10 | 0 | 16 | 0 | 0 | logfile |