Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8C1Q	16380	2024-02-17	2022-12-21	2.82	2.61	2.76	2.8	0.010	1.40	1.0	0.08	16.04	0.01	2.171	4.38	2.54	2.7	97.3	0.0	-0.72	0.64	0.82	3.35	2.8	0.005	0.61	0.0	0.04	16.53	0.01	2.173	7.37	2.38	2.2	97.8	0.0	0.74	0.53	0.72	0.86	2.67	18462	2315	23	0	18	25	0	logfile
✔	8C1P	16379	2024-02-17	2022-12-21	2.9	2.28	2.63	2.7	0.009	1.47	6.0	0.09	17.09	0.01	2.288	4.78	4.44	3.9	96.1	0.0	-1.55	0.56	0.81	4.18	2.6	0.004	0.61	0.0	0.04	16.92	0.00	2.096	6.80	2.82	2.6	97.4	0.0	0.58	0.96	0.66	0.85	3.63	17849	2300	22	0	16	64	0	logfile
✔	8HTi	35010	2024-02-13	2022-12-21	2.97	2.25	2.98	3.1	0.004	0.60	0.0	0.04	15.49	0.00	2.277	5.96	0.00	3.0	97.0	0.0	0.28	0.79	0.85	2.60	3.1	0.003	0.52	0.0	0.04	16.52	0.00	2.119	4.59	2.49	2.9	97.1	0.0	0.87	0.35	0.78	0.85	2.36	7390	962	6	0	1	0	0	logfile
✔	8C1V	16383	2024-02-19	2022-12-21	2.9	3.34	3.04	3.2	0.004	0.60	1.0	0.05	13.68	0.00	1.819	8.18	0.40	4.4	95.6	0.0	-0.12	0.75	0.64	1.69	3.2	0.004	0.63	0.0	0.05	15.25	0.00	2.208	9.90	2.22	4.4	95.6	0.0	-0.86	0.78	0.85	0.88	2.41	25590	3198	15	0	51	0	0	logfile
✔	8FKZ	29262	2024-02-18	2022-12-21	3.04	3.41	3.18	3.1	0.003	0.54	0.0	0.03	21.45	0.00	1.941	2.23	0.00	1.0	99.0	0.0	1.48	0.75	0.83	2.81	3.1	0.007	0.68	0.0	0.04	21.59	0.01	1.861	7.32	1.83	2.8	97.1	0.0	0.76	1.15	0.76	0.87	2.61	130011	8099	63	3056	69	0	0	logfile
✔	8FKQ	29253	2024-02-21	2022-12-21	2.76	3.11	2.87	3.0	0.003	0.55	0.0	0.03	20.66	0.00	2.001	1.93	0.02	1.1	98.9	0.0	1.47	0.77	0.82	3.34	3.0	0.006	0.61	0.0	0.04	20.91	0.00	1.966	5.67	1.48	2.1	97.9	0.0	0.87	0.41	0.79	0.88	3.16	93805	6882	52	1784	53	0	0	logfile
✔	8FKX	29260	2024-02-20	2022-12-21	2.59	2.79	2.72	1.7	0.003	0.55	0.0	0.04	20.01	0.00	1.961	1.77	0.01	1.2	98.8	0.0	1.69	0.79	0.82	3.59	1.7	0.006	0.58	0.0	0.04	20.30	0.00	1.844	5.05	1.58	2.3	97.7	0.0	1.57	1.14	0.80	0.87	3.25	138643	10793	67	2472	65	0	0	logfile
✔	8HTT	35017	2024-02-13	2022-12-21	3.6	4.33	3.64	4.1	0.005	0.69	0.0	0.09	19.58	0.00	2.197	27.23	0.58	6.0	94.0	0.0	1.48	0.66	0.82	2.08	4.1	0.003	0.67	0.0	0.04	15.86	0.00	2.231	8.87	2.90	6.5	93.5	0.0	1.06	2.62	0.66	0.83	1.69	3292	389	5	0	8	0	0	logfile
✔	8C1R	16381	2024-02-17	2022-12-21	3.2	2.92	3.03	3.1	0.011	1.15	0.0	0.07	17.11	0.01	2.068	7.15	3.23	4.7	95.2	0.1	0.17	0.61	0.84	3.26	3.1	0.006	0.63	0.0	0.04	16.11	0.00	2.195	7.26	2.30	3.8	96.2	0.0	0.85	0.91	0.71	0.89	2.66	18333	2331	19	0	20	6	0	logfile
✔	8FLD	29275	2024-02-27	2022-12-21	2.58	2.89	2.64	2.9	0.009	0.83	0.0	0.04	21.82	0.03	1.041	2.28	0.00	2.1	97.9	0.0	-0.07	0.86	0.86	4.32	2.9	0.004	0.70	0.0	0.03	22.11	0.01	1.053	5.54	2.01	2.1	97.9	0.0	1.04	0.45	0.86	0.88	3.66	148569	8505	68	3718	93	0	0	logfile
✔	8FKU	29257	2024-02-17	2022-12-21	2.82	3.05	2.91	3.0	0.006	0.64	0.0	0.04	20.35	0.01	1.935	1.98	0.01	1.6	98.4	0.0	1.03	0.75	0.83	3.77	3.0	0.003	0.53	0.0	0.04	20.58	0.00	1.967	5.17	1.38	2.1	97.9	0.0	1.54	0.39	0.77	0.87	3.11	125869	9435	62	2407	62	0	0	logfile
✔	8FKP	29252	2024-02-22	2022-12-21	2.85	3.16	2.95	3.1	0.005	0.61	0.0	0.04	20.18	0.01	1.446	2.12	0.00	1.2	98.8	0.0	1.46	0.77	0.83	3.45	3.1	0.006	0.62	0.0	0.04	20.56	0.00	1.868	5.85	1.96	2.3	97.7	0.0	1.39	0.43	0.77	0.86	2.84	101452	7963	57	1728	57	0	0	logfile
✔	8FKT	29256	2024-02-19	2022-12-21	2.81	2.81	2.95	2.9	0.004	0.59	0.0	0.04	19.92	0.00	1.945	1.91	0.02	1.3	98.7	0.0	1.55	0.74	0.81	3.63	2.9	0.003	0.51	0.0	0.03	20.23	0.00	1.980	5.46	1.26	1.9	98.1	0.0	1.70	0.40	0.76	0.86	3.13	134945	10797	65	2347	69	0	0	logfile
✔	8FLC	29274	2024-02-21	2022-12-21	2.76	2.78	2.87	2.9	0.007	0.76	0.0	0.03	22.17	0.03	1.975	2.57	0.00	1.5	98.5	0.0	0.65	0.82	0.82	3.53	2.9	0.008	0.86	0.0	0.04	22.58	0.01	1.857	7.50	2.84	3.1	96.9	0.0	0.46	1.19	0.83	0.86	3.33	139595	7626	65	3648	95	0	0	logfile
✔	8FL1	29264	2024-02-17	2022-12-21	3.75	3.87	3.78	3.9	0.005	0.68	0.0	0.05	16.10	0.00	2.259	3.93	0.00	2.5	97.5	0.0	0.22	0.77	0.79	2.27	3.9	0.003	0.63	0.0	0.05	14.96	0.00	2.132	6.90	2.54	3.5	96.5	0.0	-0.01	1.30	0.79	0.81	2.02	16951	1972	37	0	108	0	0	logfile
✔	8FKR	29254	2024-02-15	2022-12-21	2.89	3.25	3.05	3.1	0.003	0.55	0.0	0.04	20.11	0.00	1.940	2.04	0.01	1.2	98.8	0.0	1.71	0.75	0.81	3.01	3.1	0.005	0.59	0.0	0.04	20.45	0.00	1.929	6.20	1.55	2.2	97.8	0.0	1.36	0.44	0.77	0.86	2.88	116287	9101	63	1991	58	0	0	logfile
✔	8FKS	29255	2024-02-13	2022-12-21	2.88	3.23	3.00	3.1	0.004	0.57	0.0	0.04	20.51	0.00	1.885	2.38	0.01	1.2	98.8	0.0	1.20	0.75	0.81	3.31	3.1	0.004	0.54	0.0	0.03	20.66	0.00	1.898	5.78	1.35	2.0	98.0	0.0	1.51	1.57	0.77	0.85	2.82	108693	8026	58	2046	64	0	0	logfile
✔	8FL9	29271	2024-02-21	2022-12-21	2.75	2.91	2.83	3.0	0.008	0.79	0.0	0.04	22.11	0.03	1.913	2.47	0.00	1.9	98.1	0.0	0.50	0.83	0.83	3.59	3.0	0.006	0.78	0.0	0.04	22.42	0.01	1.870	7.32	2.44	2.8	97.2	0.0	0.60	0.49	0.83	0.86	3.34	139879	7690	65	3636	95	0	0	logfile
✔	8FKW	29259	2024-02-21	2022-12-21	2.5	2.85	2.62	2.8	0.003	0.53	0.0	0.03	19.82	0.00	1.946	1.75	0.01	1.1	98.9	0.0	2.03	0.80	0.82	3.78	2.8	0.002	0.51	0.0	0.03	20.32	0.00	1.949	5.42	1.16	1.6	98.4	0.0	1.86	1.15	0.81	0.86	3.25	139783	10864	65	2499	63	0	0	logfile
✔	8FL7	29269	2024-02-28	2022-12-21	2.55	2.80	2.68	2.9	0.007	0.74	0.0	0.04	21.70	0.03	1.958	2.09	0.01	1.3	98.7	0.0	0.88	0.86	0.86	4.06	2.9	0.003	0.71	1.0	0.04	22.17	0.01	1.837	5.88	1.94	1.9	98.1	0.0	1.13	0.43	0.85	0.87	3.66	149506	8711	69	3684	95	0	0	logfile

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