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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8TFK | 41232 | 2024-04-12 | 2023-07-11 | 2.66 | 2.90 | 2.75 | 3.3 | 0.006 | 0.81 | 0.0 | 0.10 | 18.76 | 0.00 | 1.729 | 6.79 | 2.68 | 3.5 | 96.5 | 0.0 | -0.92 | 0.37 | 0.33 | 0.08 | 2.9 | 0.005 | 0.78 | 0.0 | 0.10 | 18.13 | 0.00 | 1.777 | 5.15 | 2.36 | 3.4 | 96.6 | 0.0 | -0.08 | 1.16 | 0.71 | 0.88 | 3.97 | 81543 | 5280 | 24 | 0 | 60 | 0 | 39601 | logfile |
✔ | 8K1L | 36794 | 2024-04-07 | 2023-07-11 | 3.44 | 3.80 | 3.50 | 3.7 | 0.004 | 1.17 | 0.0 | 0.05 | 16.42 | 0.01 | 2.067 | 19.32 | 0.37 | 5.9 | 94.1 | 0.0 | -1.16 | 0.65 | 0.85 | 1.91 | 3.7 | 0.003 | 0.84 | 0.0 | 0.04 | 16.84 | 0.00 | 2.184 | 12.11 | 3.39 | 5.4 | 94.5 | 0.2 | -0.01 | 0.34 | 0.67 | 0.86 | 1.81 | 10026 | 1271 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8K20 | 36808 | 2024-04-07 | 2023-07-11 | 3.7 | 4.39 | 3.57 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 14.08 | 0.00 | 2.100 | 14.06 | 0.00 | 2.8 | 97.2 | 0.0 | 0.88 | 0.82 | 0.64 | 0.83 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 15.90 | 0.00 | 2.078 | 16.51 | 2.04 | 3.6 | 96.4 | 0.0 | 0.75 | 1.29 | 0.82 | 0.66 | 0.94 | 9356 | 1209 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8K1T | 36803 | 2024-04-11 | 2023-07-11 | 2.48 | 2.75 | 2.59 | 2.7 | 0.004 | 0.53 | 0.0 | 0.04 | 10.97 | 0.00 | 2.240 | 3.11 | 0.97 | 2.2 | 97.8 | 0.0 | 0.84 | 0.69 | 0.84 | 3.15 | 2.7 | 0.003 | 0.58 | 0.0 | 0.04 | 16.62 | 0.00 | 2.144 | 7.86 | 2.84 | 2.2 | 97.8 | 0.0 | 1.70 | 1.80 | 0.67 | 0.86 | 2.47 | 23866 | 3052 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 8K1U | 36804 | 2024-04-12 | 2023-07-11 | 2.82 | 3.02 | 2.86 | 3.1 | 0.002 | 0.50 | 1.0 | 0.04 | 10.68 | 0.00 | 2.294 | 2.81 | 1.51 | 2.6 | 97.4 | 0.0 | -1.57 | 0.71 | 0.81 | 2.99 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 15.74 | 0.00 | 2.069 | 7.49 | 2.95 | 2.9 | 97.1 | 0.0 | 0.97 | 0.74 | 0.70 | 0.86 | 2.56 | 26964 | 3446 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 8K1S | 36800 | 2024-04-11 | 2023-07-11 | 2.83 | 3.20 | 2.99 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 10.43 | 0.00 | 2.272 | 6.20 | 0.76 | 2.4 | 97.6 | 0.0 | 1.13 | 0.59 | 0.75 | 2.70 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 16.13 | 0.00 | 2.135 | 9.93 | 2.85 | 3.4 | 96.6 | 0.0 | 2.03 | 1.12 | 0.57 | 0.80 | 1.89 | 21000 | 2695 | 24 | 0 | 12 | 0 | 0 | logfile |
✔ | 8PQL | 17822 | 2024-04-08 | 2023-07-11 | 3.76 | 2.60 | — | 2.1 | 0.003 | 0.70 | 0.0 | 0.04 | 17.44 | 0.01 | 1.986 | 7.89 | 0.54 | 9.3 | 90.7 | 0.0 | -0.67 | 0.78 | 0.73 | 1.62 | 2.2 | 0.005 | 0.85 | 1.0 | 0.04 | 17.50 | 0.00 | 2.095 | 10.15 | 4.60 | 9.1 | 90.9 | 0.0 | -0.37 | 0.91 | 0.78 | 0.74 | 1.51 | 13553 | 1837 | 10 | 0 | 4 | 0 | 0 | logfile |
✔ | 8PPV | 17817 | 2024-04-10 | 2023-07-10 | 3.02 | 3.25 | 3.10 | 3.3 | 0.012 | 0.63 | 0.0 | 0.05 | 18.32 | 0.00 | 1.764 | 6.48 | 0.15 | 4.9 | 95.0 | 0.1 | -0.08 | 0.73 | 0.87 | 2.58 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 18.85 | 0.00 | 1.954 | 5.10 | 3.02 | 3.6 | 96.4 | 0.0 | 0.17 | 0.31 | 0.69 | 0.86 | 2.57 | 19625 | 2373 | 9 | 35 | 7 | 0 | 0 | logfile |
✔ | 8PPT | 17815 | 2024-04-10 | 2023-07-10 | 2.9 | 3.15 | 3.01 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 19.22 | 0.00 | 1.950 | 6.05 | 2.82 | 3.8 | 96.2 | 0.0 | -0.19 | 0.71 | 0.84 | 2.71 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 19.50 | 0.00 | 1.949 | 6.10 | 2.62 | 3.8 | 96.2 | 0.0 | 0.29 | 0.33 | 0.71 | 0.85 | 2.61 | 19620 | 2376 | 9 | 34 | 6 | 0 | 0 | logfile |
✔ | 8PQ2 | 17819 | 2024-04-05 | 2023-07-10 | 3.85 | 4.01 | 3.65 | 3.9 | 0.002 | 0.51 | 0.0 | 0.04 | 10.37 | 0.00 | 2.133 | 5.53 | 2.73 | 8.3 | 91.7 | 0.0 | -2.04 | 0.60 | 0.79 | 3.14 | 3.9 | 0.003 | 0.56 | 0.0 | 0.04 | 13.07 | 0.00 | 2.022 | 8.38 | 3.33 | 11.2 | 88.8 | 0.0 | -2.27 | 0.56 | 0.60 | 0.80 | 3.19 | 5956 | 390 | 4 | 0 | 1 | 0 | 2891 | logfile |
✔ | 8TFB | 41228 | 2024-04-12 | 2023-07-09 | 2.99 | 3.29 | 3.14 | 3.3 | 0.003 | 0.47 | 2.0 | 0.04 | 13.18 | 0.00 | 2.087 | 4.51 | 0.00 | 1.6 | 98.4 | 0.0 | 1.54 | 0.56 | 0.66 | 3.91 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 15.72 | 0.00 | 2.078 | 4.45 | 1.36 | 1.5 | 98.5 | 0.0 | 1.38 | 0.49 | 0.78 | 0.87 | 3.56 | 42056 | 5316 | 24 | 0 | 12 | 0 | 0 | logfile |
✔ | 8K0B | 36759 | 2024-04-05 | 2023-07-08 | 3.56 | 2.51 | 3.58 | 1.9 | 0.004 | 0.86 | 2.0 | 0.05 | 17.34 | 0.00 | 2.195 | 14.96 | 1.28 | 8.0 | 92.0 | 0.0 | -0.63 | 0.53 | 0.53 | 0.79 | 2.0 | 0.004 | 0.78 | 0.0 | 0.04 | 17.55 | 0.00 | 2.156 | 15.66 | 6.39 | 8.3 | 91.7 | 0.0 | -0.41 | 0.44 | 0.54 | 0.54 | 0.38 | 5689 | 689 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PPR | 17814 | 2024-04-07 | 2023-07-08 | 3.0 | 3.16 | 3.06 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 14.03 | 0.00 | 2.133 | 12.50 | 0.00 | 2.1 | 97.8 | 0.1 | 3.16 | 0.77 | 0.74 | 1.10 | 3.3 | 0.005 | 0.67 | 0.0 | 0.04 | 16.50 | 0.00 | 2.129 | 11.45 | 2.05 | 2.6 | 97.4 | 0.1 | 2.73 | 1.19 | 0.77 | 0.76 | 1.34 | 11354 | 1388 | 9 | 0 | 0 | 1 | 0 | logfile |
✔ | 8TF2 | 41217 | 2024-04-10 | 2023-07-07 | 2.57 | 2.79 | 2.66 | 2.8 | 0.012 | 1.75 | 3.0 | 0.09 | 15.41 | 0.01 | 2.484 | 4.43 | 0.38 | 1.5 | 98.5 | 0.0 | 0.29 | 0.57 | 0.85 | 5.52 | 2.9 | 0.002 | 0.49 | 0.0 | 0.04 | 16.22 | 0.00 | 2.228 | 5.45 | 1.97 | 1.0 | 99.0 | 0.0 | 2.00 | 1.72 | 0.65 | 0.89 | 4.52 | 19856 | 2408 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 8TEW | 41204 | 2024-04-16 | 2023-07-07 | 3.02 | 3.25 | 2.90 | 3.2 | 0.005 | 0.66 | 0.0 | 0.04 | 13.91 | 0.00 | 2.081 | 3.80 | 0.11 | 3.8 | 96.1 | 0.1 | 0.48 | 0.47 | 0.91 | 3.19 | 3.2 | 0.005 | 0.65 | 0.0 | 0.04 | 15.95 | 0.00 | 2.033 | 6.79 | 3.15 | 3.8 | 96.1 | 0.0 | 0.66 | 0.45 | 0.47 | 0.91 | 2.69 | 104261 | 13080 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PPo | 17806 | 2024-04-05 | 2023-07-07 | 2.0 | 2.30 | 1.95 | 2.2 | 0.008 | 1.20 | 1.0 | 0.07 | 13.41 | 0.01 | 2.625 | 0.29 | 0.00 | 6.7 | 93.3 | 0.0 | 0.71 | 0.58 | 0.84 | 6.50 | 2.2 | 0.004 | 0.53 | 0.0 | 0.06 | 14.00 | 0.00 | 2.289 | 0.29 | 0.52 | 0.0 | 100.0 | 0.0 | 1.18 | 0.37 | 0.50 | 0.88 | 5.44 | 1696 | 240 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TF3 | 41218 | 2024-04-10 | 2023-07-07 | 2.94 | 3.18 | 2.97 | 3.3 | 0.012 | 1.80 | 4.0 | 0.09 | 14.59 | 0.02 | 2.356 | 4.45 | 0.00 | 2.7 | 97.3 | 0.0 | -0.94 | 0.57 | 0.83 | 5.13 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.90 | 0.00 | 2.202 | 5.85 | 1.39 | 1.5 | 98.5 | 0.0 | 1.83 | 0.47 | 0.65 | 0.87 | 3.64 | 19888 | 2408 | 8 | 0 | 20 | 0 | 0 | logfile |
✔ | 8TF4 | 41219 | 2024-04-10 | 2023-07-07 | 2.86 | 3.17 | 2.99 | 3.2 | 0.012 | 1.77 | 0.0 | 0.09 | 15.62 | 0.01 | 2.302 | 5.28 | 0.58 | 2.0 | 98.0 | 0.0 | -0.60 | 0.57 | 0.85 | 4.97 | 3.2 | 0.002 | 0.51 | 0.0 | 0.04 | 16.34 | 0.00 | 2.181 | 5.18 | 0.48 | 1.0 | 99.0 | 0.0 | 2.10 | 0.94 | 0.64 | 0.87 | 4.27 | 19888 | 2408 | 8 | 0 | 20 | 0 | 0 | logfile |
✔ | 8TEU | 41202 | 2024-04-14 | 2023-07-07 | 4.01 | 3.13 | 3.90 | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 14.82 | 0.00 | 2.095 | 6.59 | 0.11 | 4.1 | 95.8 | 0.1 | -0.42 | 0.32 | 0.69 | — | 3.3 | 0.003 | 0.67 | 0.0 | 0.04 | 14.51 | 0.00 | 1.920 | 11.36 | 0.07 | 4.6 | 95.4 | 0.0 | -0.19 | 0.62 | 0.32 | 0.69 | — | 96759 | 12139 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TEP | 41194 | 2024-04-06 | 2023-07-06 | 3.5 | 4.51 | 3.65 | 4.5 | 0.004 | 0.75 | 11.0 | 0.05 | 13.32 | 0.01 | 2.160 | 7.50 | 0.07 | 3.9 | 96.0 | 0.1 | -0.11 | 0.40 | 0.71 | 1.62 | 4.5 | 0.003 | 0.72 | 0.0 | 0.04 | 16.32 | 0.00 | 2.031 | 14.14 | 3.61 | 4.9 | 95.1 | 0.0 | -0.15 | 0.57 | 0.31 | 0.72 | 1.18 | 112987 | 14141 | 26 | 0 | 0 | 0 | 0 | logfile |