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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9BX8 | 44999 | 2025-06-14 | 2024-05-22 | 3.59 | 3.67 | 3.12 | 3.5 | 0.008 | 0.71 | 3.0 | 0.06 | 17.17 | 0.00 | 1.912 | 17.05 | 1.46 | 1.6 | 98.4 | 0.0 | 1.10 | 0.71 | 0.71 | 2.43 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 17.82 | 0.00 | 1.933 | 14.19 | 1.75 | 1.8 | 98.2 | 0.0 | 0.86 | 1.44 | 0.70 | 0.81 | 2.37 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BXS | 45010 | 2025-06-14 | 2024-05-22 | 3.37 | 3.77 | 3.03 | 3.5 | 0.008 | 0.83 | 3.0 | 0.06 | 17.55 | 0.00 | 1.912 | 9.35 | 1.34 | 2.1 | 97.9 | 0.0 | 0.58 | 0.68 | 0.67 | 2.67 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 17.66 | 0.00 | 1.880 | 10.36 | 2.24 | 2.6 | 97.4 | 0.0 | 1.20 | 1.28 | 0.68 | 0.81 | 2.58 | 16678 | 2026 | 9 | 2 | 10 | 0 | 0 | logfile |
✔ | 9BX3 | 44992 | 2025-06-14 | 2024-05-22 | 3.9 | 3.76 | 3.33 | 3.6 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.912 | 17.02 | 1.34 | 1.6 | 98.4 | 0.0 | 1.09 | 0.68 | 0.66 | 2.16 | 3.6 | 0.005 | 0.81 | 0.0 | 0.05 | 17.78 | 0.00 | 1.844 | 16.83 | 2.57 | 2.2 | 97.8 | 0.0 | 0.51 | 2.74 | 0.71 | 0.78 | 1.61 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BWT | 44979 | 2025-06-08 | 2024-05-21 | 2.5 | 2.72 | 2.59 | 2.8 | 0.006 | 0.71 | 0.0 | 0.04 | 17.53 | 0.00 | 1.847 | 23.32 | 2.72 | 4.2 | 95.6 | 0.2 | 1.32 | 0.47 | 0.79 | 3.62 | 2.8 | 0.003 | 0.60 | 0.0 | 0.04 | 17.37 | 0.00 | 2.494 | 6.42 | 2.14 | 3.8 | 96.1 | 0.1 | 1.19 | 0.42 | 0.61 | 0.88 | 3.94 | 9955 | 1271 | 5 | 0 | 3 | 6 | 0 | logfile |
✔ | 9BWJ | 44976 | 2025-06-21 | 2024-05-21 | 2.21 | 2.79 | 2.16 | 2.6 | 0.015 | 1.02 | 0.0 | 0.05 | 14.55 | 0.01 | 2.131 | 4.78 | 0.51 | 2.0 | 98.0 | 0.0 | -1.33 | 0.76 | 0.88 | 5.15 | 2.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.97 | 0.00 | 2.064 | 4.71 | 1.78 | 1.4 | 98.6 | 0.0 | 1.86 | 0.92 | 0.78 | 0.91 | 4.86 | 14705 | 1730 | 20 | 0 | 55 | 15 | 0 | logfile |
✔ | 8ZM0 | 60234 | 2025-06-04 | 2024-05-21 | 3.1 | 3.18 | 1.79 | 3.3 | 0.009 | 0.53 | 0.0 | 0.05 | 12.83 | 0.00 | 2.710 | 0.22 | 0.00 | 0.0 | 100.0 | 0.0 | -8.10 | 0.52 | 0.83 | 8.98 | 3.2 | 0.072 | 2.93 | 0.0 | 0.28 | 13.82 | 0.02 | 2.357 | 29.86 | 7.53 | 43.5 | 56.5 | 0.0 | -7.84 | 1.57 | 0.56 | 0.87 | 8.98 | 2604 | 248 | 62 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZLU | 60233 | 2025-06-23 | 2024-05-21 | 2.47 | 2.21 | 2.54 | 1.9 | 0.002 | 0.54 | 0.0 | 0.04 | 19.71 | 0.00 | 2.131 | 5.63 | 4.41 | 6.6 | 93.2 | 0.1 | -0.05 | 0.82 | 0.81 | 3.07 | 1.9 | 0.003 | 0.58 | 0.0 | 0.04 | 19.35 | 0.00 | 2.249 | 4.17 | 3.59 | 7.4 | 92.5 | 0.1 | 0.30 | 1.19 | 0.84 | 0.84 | 3.12 | 27053 | 3322 | 13 | 59 | 2 | 0 | 0 | logfile |
✔ | 9BWS | 44978 | 2025-06-05 | 2024-05-21 | 2.39 | 3.43 | 2.42 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 14.79 | 0.01 | 2.288 | 2.97 | 0.93 | 4.7 | 95.3 | 0.0 | 4.00 | 0.74 | 0.84 | 3.99 | 3.2 | 0.003 | 0.63 | 0.0 | 0.03 | 15.24 | 0.00 | 2.484 | 2.51 | 0.46 | 4.3 | 95.7 | 0.0 | 4.87 | 2.15 | 0.65 | 0.87 | 3.23 | 4286 | 514 | 4 | 0 | 22 | 0 | 0 | logfile |
✔ | 9BVQ | 44941 | 2025-06-05 | 2024-05-20 | 3.3 | 3.82 | 3.28 | 3.7 | 0.004 | 1.39 | 0.0 | 0.10 | 15.64 | 0.00 | 2.201 | 2.52 | 1.58 | 1.2 | 98.8 | 0.0 | 0.89 | 0.70 | 0.88 | 3.92 | 3.7 | 0.004 | 0.60 | 0.0 | 0.04 | 13.88 | 0.00 | 2.606 | 3.28 | 1.11 | 3.3 | 96.7 | 0.0 | 2.19 | 1.04 | 0.64 | 0.88 | 3.42 | 5977 | 700 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 8ZLo | 60231 | 2025-06-05 | 2024-05-20 | 3.1 | 2.98 | 2.80 | 3.3 | 0.015 | 1.52 | 0.0 | 0.08 | 17.15 | 0.01 | 2.063 | 28.08 | 0.00 | 9.4 | 90.6 | 0.0 | -4.08 | 0.25 | 0.57 | 3.84 | 3.1 | 0.007 | 1.04 | 0.0 | 0.06 | 15.05 | 0.00 | 2.596 | 10.09 | 5.70 | 11.0 | 89.0 | 0.0 | -4.03 | 1.95 | 0.52 | 0.88 | 3.82 | 4816 | 660 | 18 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BW3 | 44947 | 2025-06-10 | 2024-05-20 | 2.42 | 2.60 | 2.45 | 2.6 | 0.008 | 0.42 | 0.0 | 0.04 | 17.84 | 0.00 | 1.919 | 22.73 | 0.81 | 1.7 | 98.3 | 0.0 | 1.54 | 0.71 | 0.84 | 4.11 | 2.6 | 0.004 | 0.57 | 0.0 | 0.04 | 18.18 | 0.00 | 1.932 | 6.65 | 1.46 | 1.7 | 98.3 | 0.0 | 0.93 | 0.34 | 0.72 | 0.84 | 4.09 | 11440 | 1390 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9BVo | 44939 | 2025-06-05 | 2024-05-20 | 4.4 | 4.59 | 4.23 | 4.5 | 0.003 | 1.37 | 0.0 | 0.08 | 16.83 | 0.01 | 2.321 | 2.66 | 5.68 | 2.7 | 97.3 | 0.0 | -0.49 | 0.51 | 0.69 | — | 4.5 | 0.003 | 0.68 | 0.0 | 0.04 | 12.76 | 0.00 | 2.524 | 6.15 | 0.00 | 4.7 | 95.3 | 0.0 | 1.41 | 1.01 | 0.59 | 0.77 | — | 5469 | 642 | 5 | 0 | 8 | 0 | 0 | logfile |
✔ | 8ZLP | 60232 | 2025-06-04 | 2024-05-20 | 3.5 | 3.09 | 3.03 | 3.4 | 0.007 | 0.55 | 0.0 | 0.05 | 12.26 | 0.00 | 2.368 | 4.84 | 0.00 | 4.2 | 95.8 | 0.0 | -4.52 | 0.48 | 0.91 | 4.59 | 3.4 | 0.002 | 0.48 | 0.0 | 0.05 | 14.79 | 0.00 | 2.616 | 2.48 | 3.43 | 2.8 | 97.2 | 0.0 | -2.90 | 1.91 | 0.47 | 0.90 | 3.82 | 4116 | 588 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 9FEE | 50339 | 2025-06-07 | 2024-05-19 | 3.03 | 3.26 | 3.13 | 3.3 | 0.004 | 0.58 | 0.0 | 0.05 | 15.80 | 0.00 | 2.225 | 4.99 | 0.20 | 7.5 | 92.5 | 0.0 | -1.40 | 0.76 | 0.87 | 2.79 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 16.12 | 0.00 | 2.575 | 4.46 | 2.82 | 7.4 | 92.6 | 0.0 | 0.49 | 0.92 | 0.74 | 0.85 | 2.54 | 9112 | 1236 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FEF | 50340 | 2025-06-09 | 2024-05-19 | 2.98 | 3.19 | 3.00 | 3.2 | 0.008 | 0.83 | 1.0 | 0.05 | 16.73 | 0.01 | 2.173 | 6.86 | 0.58 | 5.7 | 94.0 | 0.3 | 0.09 | 0.74 | 0.86 | 2.49 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 16.66 | 0.01 | 2.562 | 5.32 | 2.56 | 5.7 | 94.3 | 0.0 | 0.69 | 0.93 | 0.65 | 0.85 | 2.40 | 11192 | 1502 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9FE1 | 50336 | 2025-06-07 | 2024-05-17 | 3.1 | 3.31 | 3.09 | 3.2 | 0.005 | 0.83 | 0.0 | 0.05 | 15.08 | 0.01 | 2.042 | 10.17 | 0.22 | 4.5 | 95.5 | 0.0 | -1.63 | 0.77 | 0.70 | 2.76 | 3.2 | 0.003 | 0.65 | 0.0 | 0.04 | 16.43 | 0.00 | 2.333 | 6.27 | 2.00 | 3.6 | 96.4 | 0.0 | 0.27 | 2.33 | 0.78 | 0.73 | 2.82 | 8458 | 539 | 4 | 0 | 0 | 0 | 4163 | logfile |
✔ | 9FDZ | 50334 | 2025-06-20 | 2024-05-17 | 2.86 | 3.47 | 2.83 | 3.3 | 0.003 | 0.49 | 0.0 | 0.04 | 14.32 | 0.00 | 2.192 | 3.10 | 0.59 | 1.2 | 98.8 | 0.0 | 1.33 | 0.77 | 0.89 | 3.37 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 15.15 | 0.00 | 2.502 | 4.31 | 1.33 | 1.2 | 98.8 | 0.0 | 2.03 | 0.28 | 0.78 | 0.89 | 2.66 | 23736 | 3120 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZKS | 60207 | 2025-06-14 | 2024-05-17 | 3.21 | 3.57 | 3.36 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.04 | 0.00 | 1.942 | 6.94 | 0.14 | 9.1 | 90.6 | 0.3 | -0.33 | 0.60 | 0.79 | 2.20 | 3.5 | 0.005 | 0.63 | 0.0 | 0.04 | 15.38 | 0.00 | 2.534 | 5.13 | 2.38 | 9.3 | 90.5 | 0.1 | -0.24 | 0.35 | 0.62 | 0.83 | 2.12 | 16170 | 2172 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 9FDY | 50333 | 2025-06-05 | 2024-05-17 | 3.4 | 3.71 | 3.59 | 3.8 | 0.004 | 0.54 | 0.0 | 0.04 | 10.68 | 0.00 | 2.162 | 9.26 | 2.56 | 4.6 | 95.4 | 0.0 | -0.50 | 0.69 | 0.76 | 2.62 | 3.8 | 0.004 | 0.69 | 0.0 | 0.05 | 14.51 | 0.00 | 2.403 | 10.42 | 5.26 | 6.2 | 93.8 | 0.0 | -1.05 | 1.15 | 0.68 | 0.77 | 2.44 | 6119 | 770 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ZKU | 60209 | 2025-06-14 | 2024-05-17 | 3.34 | 3.60 | 3.39 | 3.6 | 0.008 | 0.66 | 0.0 | 0.04 | 14.28 | 0.00 | 2.228 | 5.90 | 0.00 | 7.5 | 92.4 | 0.1 | -0.67 | 0.66 | 0.82 | 2.48 | 3.6 | 0.002 | 0.57 | 0.0 | 0.04 | 15.02 | 0.00 | 2.406 | 4.67 | 1.91 | 6.2 | 93.8 | 0.0 | 0.44 | 0.35 | 0.65 | 0.83 | 1.60 | 16174 | 2171 | 6 | 0 | 6 | 0 | 0 | logfile |