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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UVU | 42629 | 2024-07-20 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 16.28 | 0.00 | 2.215 | 9.10 | 2.65 | 5.6 | 94.4 | 0.0 | 2.23 | 0.25 | 0.64 | 0.82 | 3.10 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-07-20 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 17.33 | 0.00 | 2.233 | 8.79 | 2.07 | 3.9 | 96.1 | 0.0 | 3.47 | 0.35 | 0.63 | 0.82 | 1.80 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8X01 | 37964 | 2024-07-21 | 2023-11-02 | 3.01 | 3.35 | — | 3.3 | 0.005 | 0.75 | 1.0 | 0.05 | 15.84 | 0.01 | 2.259 | 11.44 | 0.49 | 1.8 | 98.2 | 0.0 | 1.10 | 0.71 | 0.84 | 2.54 | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 16.48 | 0.00 | 2.164 | 11.24 | 3.06 | 2.1 | 97.9 | 0.0 | 1.28 | 0.67 | 0.68 | 0.83 | 2.75 | 12742 | 1608 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8WZX | 37963 | 2024-07-19 | 2023-11-02 | 2.88 | 2.79 | 2.64 | 3.0 | 0.009 | 0.97 | 0.0 | 0.06 | 10.36 | 0.00 | 2.604 | 10.76 | 0.00 | 2.0 | 98.0 | 0.0 | -4.13 | 0.54 | 0.86 | 6.58 | 3.0 | 0.004 | 0.73 | 0.0 | 0.04 | 15.13 | 0.00 | 2.387 | 8.06 | 1.71 | 3.5 | 96.5 | 0.0 | -4.16 | 0.93 | 0.53 | 0.89 | 5.59 | 7300 | 1020 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2024-07-18 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.003 | 0.91 | 0.0 | 0.05 | 16.74 | 0.01 | 2.249 | 38.64 | 6.52 | 8.0 | 92.0 | 0.0 | -1.98 | 1.31 | 0.75 | 0.58 | 0.64 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UV3 | 42604 | 2024-07-20 | 2023-11-02 | 2.72 | 2.82 | 2.64 | 2.8 | 0.010 | 1.06 | 0.0 | 0.06 | 14.69 | 0.01 | 1.851 | 5.72 | 0.39 | 8.0 | 91.8 | 0.2 | -3.67 | 0.38 | 0.84 | 3.98 | 2.8 | 0.003 | 0.70 | 0.0 | 0.05 | 16.05 | 0.01 | 1.919 | 4.48 | 2.36 | 5.6 | 94.4 | 0.0 | -1.63 | 0.35 | 0.37 | 0.76 | 3.31 | 12069 | 1534 | 9 | 0 | 3 | 276 | 0 | logfile |
✔ | 8R1C | 18807 | 2024-07-25 | 2023-11-01 | 2.2 | 2.38 | 2.25 | 2.4 | 0.008 | 0.87 | 2.0 | 0.05 | 14.58 | 0.01 | 2.093 | 4.37 | 1.07 | 2.9 | 97.1 | 0.0 | 0.17 | 0.67 | 0.83 | 5.11 | 2.4 | 0.003 | 0.53 | 0.0 | 0.04 | 14.93 | 0.00 | 2.093 | 4.22 | 1.70 | 2.6 | 97.4 | 0.0 | 0.40 | 0.76 | 0.67 | 0.87 | 5.06 | 30426 | 3867 | 12 | 0 | 30 | 0 | 0 | logfile |
✔ | 8UUK | 42588 | 2024-07-20 | 2023-11-01 | 2.5 | 3.07 | 2.51 | 2.9 | 0.004 | 0.67 | 0.0 | 0.05 | 21.91 | 0.00 | 2.180 | 11.02 | 1.53 | 4.4 | 95.6 | 0.0 | 1.07 | 0.59 | 0.84 | 3.54 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 16.14 | 0.00 | 2.155 | 10.69 | 2.10 | 4.8 | 95.0 | 0.2 | 1.53 | 0.36 | 0.59 | 0.83 | 3.31 | 10242 | 1226 | 4 | 0 | 30 | 0 | 0 | logfile |
✔ | 8WZB | 37949 | 2024-07-22 | 2023-11-01 | 3.28 | 2.56 | — | 3.1 | 0.005 | 1.12 | 0.0 | 0.05 | 17.82 | 0.01 | 2.290 | 5.87 | 0.74 | 4.2 | 95.7 | 0.0 | -2.34 | 0.79 | 0.76 | 1.83 | 3.0 | 0.005 | 0.76 | 0.0 | 0.05 | 17.95 | 0.01 | 2.105 | 15.72 | 4.59 | 4.8 | 95.1 | 0.1 | -0.72 | 1.02 | 0.81 | 0.81 | 2.24 | 17594 | 2181 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUL | 42589 | 2024-07-24 | 2023-11-01 | 3.2 | 4.04 | 3.32 | 3.7 | 0.009 | 1.04 | 0.0 | 0.07 | 14.63 | 0.01 | 2.247 | 3.74 | 0.04 | 5.0 | 95.0 | 0.0 | -1.96 | 0.86 | 0.85 | 2.90 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 14.06 | 0.00 | 2.158 | 6.34 | 0.81 | 3.9 | 96.1 | 0.0 | -0.28 | 0.34 | 0.85 | 0.84 | 2.21 | 25891 | 3254 | 13 | 0 | 33 | 0 | 0 | logfile |
✔ | 8WZ2 | 37944 | 2024-07-19 | 2023-11-01 | 2.73 | 3.66 | 2.90 | 3.4 | 0.004 | 0.58 | 0.0 | 0.08 | 7.42 | 0.00 | 2.029 | 4.69 | 0.10 | 1.0 | 99.0 | 0.0 | -1.03 | 0.72 | 0.78 | 3.28 | 3.4 | 0.008 | 1.23 | 2.0 | 0.05 | 15.41 | 0.01 | 1.950 | 15.26 | 3.10 | 2.3 | 97.7 | 0.0 | 0.63 | 4.12 | 0.70 | 0.84 | 2.77 | 9355 | 1202 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8R1F | 18809 | 2024-07-22 | 2023-11-01 | 3.67 | 3.92 | 3.69 | 3.9 | 0.008 | 0.98 | 0.0 | 0.07 | 11.49 | 0.02 | 2.496 | 0.36 | 0.21 | 2.3 | 97.7 | 0.0 | -0.70 | 0.58 | 0.53 | 1.69 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.98 | 0.00 | 1.854 | 8.66 | 1.70 | 3.5 | 96.5 | 0.0 | 0.78 | 1.64 | 0.70 | 0.69 | 1.27 | 16629 | 1025 | 5 | 0 | 3 | 0 | 8263 | logfile |
✔ | 8UUN | 42591 | 2024-07-24 | 2023-11-01 | 3.8 | 4.47 | 3.85 | 3.9 | 0.009 | 1.07 | 0.0 | 0.06 | 14.54 | 0.01 | 2.262 | 4.45 | 0.00 | 4.9 | 95.1 | 0.0 | -1.78 | 0.87 | 0.86 | 2.02 | 3.9 | 0.003 | 0.57 | 0.0 | 0.04 | 14.55 | 0.00 | 2.189 | 8.08 | 0.91 | 4.4 | 95.6 | 0.0 | -0.50 | 0.97 | 0.87 | 0.85 | 1.62 | 25829 | 3254 | 11 | 0 | 29 | 0 | 0 | logfile |
✔ | 8R1D | 18808 | 2024-07-25 | 2023-11-01 | 2.37 | 2.35 | 2.20 | 2.4 | 0.008 | 0.85 | 0.0 | 0.05 | 14.94 | 0.01 | 2.112 | 5.41 | 1.11 | 2.9 | 97.1 | 0.0 | -0.07 | 0.70 | 0.86 | 5.08 | 2.4 | 0.004 | 0.58 | 0.0 | 0.05 | 15.27 | 0.00 | 2.124 | 4.11 | 2.34 | 2.8 | 97.2 | 0.0 | 0.21 | 0.24 | 0.73 | 0.89 | 5.00 | 30493 | 3876 | 18 | 0 | 30 | 43 | 0 | logfile |
✔ | 8R1G | 18810 | 2024-07-26 | 2023-11-01 | 3.99 | 4.21 | 4.01 | 4.0 | 0.006 | 0.92 | 0.0 | 0.06 | 11.49 | 0.01 | 1.603 | 1.35 | 0.27 | 2.2 | 97.8 | 0.0 | -0.72 | 0.69 | 0.55 | 0.61 | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 15.47 | 0.00 | 1.962 | 11.79 | 2.50 | 3.4 | 96.6 | 0.0 | 0.50 | 1.43 | 0.75 | 0.67 | 0.88 | 33258 | 2050 | 10 | 0 | 6 | 0 | 16526 | logfile |
✔ | 8UUM | 42590 | 2024-07-24 | 2023-11-01 | 3.9 | 4.70 | 4.04 | 4.0 | 0.008 | 1.04 | 0.0 | 0.06 | 14.96 | 0.01 | 2.241 | 5.42 | 0.14 | 5.4 | 94.6 | 0.0 | -1.71 | 0.88 | 0.86 | 1.69 | 4.0 | 0.003 | 0.70 | 1.0 | 0.04 | 14.42 | 0.00 | 2.034 | 9.53 | 0.74 | 3.6 | 96.4 | 0.0 | -0.20 | 0.38 | 0.87 | 0.85 | 1.45 | 25786 | 3247 | 10 | 0 | 30 | 0 | 0 | logfile |
✔ | 8UUo | 42592 | 2024-07-24 | 2023-11-01 | 3.9 | 4.75 | 4.09 | 4.0 | 0.008 | 1.10 | 0.0 | 0.06 | 15.13 | 0.01 | 2.155 | 6.64 | 0.11 | 5.0 | 95.0 | 0.0 | -1.81 | 0.87 | 0.85 | 1.54 | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 14.90 | 0.00 | 2.092 | 14.64 | 1.63 | 6.0 | 94.0 | 0.0 | -0.70 | 1.00 | 0.87 | 0.85 | 1.40 | 25465 | 3218 | 9 | 0 | 22 | 0 | 0 | logfile |
✔ | 8UUE | 42580 | 2024-07-19 | 2023-11-01 | 3.96 | 4.16 | 3.95 | 4.1 | 0.011 | 1.34 | 3.0 | 0.05 | 18.95 | 0.01 | 2.131 | 16.88 | 1.45 | 10.8 | 88.3 | 1.0 | -2.50 | 0.79 | 0.81 | 1.60 | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 18.81 | 0.01 | 2.114 | 11.54 | 6.92 | 10.8 | 88.4 | 0.8 | -1.79 | 0.94 | 0.79 | 0.80 | 1.34 | 8984 | 1150 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UTN | 42543 | 2024-07-23 | 2023-10-31 | 3.1 | 2.25 | 3.07 | 2.2 | 0.006 | 0.89 | 2.0 | 0.05 | 18.88 | 0.01 | 1.920 | 5.11 | 1.64 | 3.7 | 95.5 | 0.8 | -0.26 | 0.63 | 0.82 | 3.47 | 2.2 | 0.003 | 0.59 | 0.0 | 0.04 | 17.03 | 0.00 | 1.930 | 6.92 | 3.59 | 4.0 | 95.9 | 0.1 | 0.83 | 0.95 | 0.63 | 0.83 | 3.13 | 23784 | 2981 | 16 | 2 | 11 | 0 | 0 | logfile |
✔ | 8UTo | 42544 | 2024-07-23 | 2023-10-31 | 3.2 | 2.44 | 3.17 | 3.3 | 0.005 | 0.81 | 0.0 | 0.05 | 18.60 | 0.01 | 1.940 | 3.67 | 0.59 | 3.8 | 95.9 | 0.3 | -0.12 | 0.64 | 0.84 | 3.00 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 17.14 | 0.00 | 1.944 | 7.11 | 2.26 | 4.0 | 95.9 | 0.2 | 0.77 | 0.94 | 0.65 | 0.85 | 2.61 | 23792 | 2982 | 16 | 2 | 11 | 0 | 0 | logfile |