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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8KCW | 37112 | 2024-07-20 | 2023-08-08 | 2.77 | 3.13 | 2.73 | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 18.78 | 0.01 | 2.126 | 5.92 | 0.18 | 2.8 | 97.2 | 0.0 | -4.23 | 0.60 | 0.82 | 3.29 | 3.1 | 0.005 | 0.66 | 0.0 | 0.05 | 15.50 | 0.00 | 1.936 | 6.21 | 2.33 | 2.2 | 97.8 | 0.0 | 1.28 | 1.57 | 0.59 | 0.84 | 3.29 | 10484 | 1252 | 12 | 0 | 26 | 0 | 0 | logfile |
✔ | 8TQK | 41506 | 2024-07-25 | 2023-08-07 | 3.2 | 4.28 | 3.15 | 3.5 | 0.005 | 1.00 | 3.0 | 0.06 | 17.68 | 0.00 | 1.019 | 12.45 | 2.37 | 5.3 | 94.5 | 0.2 | -1.26 | 0.84 | 0.76 | 2.09 | 3.6 | 0.006 | 0.64 | 0.0 | 0.04 | 17.32 | 0.00 | 1.891 | 11.84 | 2.07 | 7.6 | 92.2 | 0.2 | -0.83 | 1.17 | 0.86 | 0.84 | 2.05 | 29229 | 1912 | 9 | 0 | 0 | 0 | 14504 | logfile |
✔ | 8TQM | 41508 | 2024-07-19 | 2023-08-07 | 3.2 | 3.40 | 3.14 | 3.4 | 0.007 | 0.92 | 0.0 | 0.04 | 13.43 | 0.00 | 1.724 | 12.07 | 0.00 | 2.5 | 97.5 | 0.0 | 2.28 | 0.62 | 0.78 | 2.62 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 14.98 | 0.00 | 2.218 | 7.82 | 0.92 | 2.3 | 97.7 | 0.0 | 2.64 | 0.62 | 0.57 | 0.79 | 2.35 | 7231 | 843 | 2 | 0 | 7 | 0 | 0 | logfile |
✔ | 8TQi | 41505 | 2024-07-24 | 2023-08-07 | 3.24 | 4.34 | 3.18 | 3.7 | 0.006 | 0.89 | 2.0 | 0.05 | 15.99 | 0.00 | 1.816 | 5.29 | 3.75 | 4.9 | 94.8 | 0.3 | -0.63 | 0.77 | 0.81 | 3.46 | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 14.88 | 0.00 | 2.087 | 4.23 | 1.25 | 5.0 | 94.8 | 0.2 | -0.70 | 0.61 | 0.78 | 0.81 | 3.83 | 24359 | 1661 | 10 | 0 | 0 | 0 | 11831 | logfile |
✔ | 8KC7 | 37096 | 2024-07-21 | 2023-08-06 | 3.46 | 4.35 | 3.40 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 16.70 | 0.00 | 2.211 | 9.82 | 0.93 | 6.6 | 93.4 | 0.0 | -1.18 | 0.84 | 0.79 | 1.58 | 3.6 | 0.002 | 0.62 | 0.0 | 0.04 | 17.18 | 0.00 | 2.131 | 12.27 | 2.74 | 6.6 | 93.4 | 0.0 | 0.26 | 1.80 | 0.85 | 0.84 | 2.01 | 14326 | 1748 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8KC2 | 37090 | 2024-07-19 | 2023-08-05 | 2.6 | 2.24 | 2.62 | 2.0 | 0.005 | 0.75 | 0.0 | 0.05 | 14.84 | 0.01 | 1.829 | 5.70 | 0.87 | 6.9 | 93.0 | 0.1 | -0.90 | 0.79 | 0.81 | 3.58 | 2.0 | 0.003 | 0.59 | 0.0 | 0.04 | 16.75 | 0.00 | 2.063 | 5.62 | 1.45 | 5.5 | 94.5 | 0.0 | 0.04 | 0.47 | 0.83 | 0.85 | 3.28 | 6471 | 790 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 8TP2 | 41464 | 2024-07-21 | 2023-08-04 | 3.1 | 3.01 | 3.03 | 3.2 | 0.021 | 1.69 | 0.0 | 0.10 | 10.56 | 0.01 | 2.009 | 1.70 | 0.00 | 2.2 | 97.8 | 0.0 | 0.79 | 0.77 | 0.85 | 4.18 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 14.60 | 0.00 | 2.170 | 7.07 | 1.64 | 2.7 | 97.3 | 0.0 | 0.48 | 1.36 | 0.77 | 0.87 | 3.28 | 13485 | 1678 | 11 | 0 | 19 | 0 | 0 | logfile |
✔ | 8TP5 | 41467 | 2024-07-22 | 2023-08-04 | 2.9 | 3.29 | 2.95 | 3.2 | 0.021 | 1.86 | 1.0 | 0.11 | 10.61 | 0.01 | 2.336 | 1.75 | 0.11 | 1.8 | 98.2 | 0.0 | 1.07 | 0.76 | 0.79 | 3.53 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 15.18 | 0.00 | 2.122 | 7.42 | 1.54 | 2.7 | 97.3 | 0.0 | 0.70 | 0.80 | 0.78 | 0.85 | 3.40 | 17508 | 2205 | 18 | 0 | 18 | 0 | 0 | logfile |
✔ | 8TPA | 41471 | 2024-07-22 | 2023-08-04 | 3.0 | 3.16 | 3.09 | 3.2 | 0.022 | 1.81 | 0.0 | 0.11 | 10.43 | 0.01 | 2.338 | 1.47 | 0.00 | 1.3 | 98.7 | 0.0 | 1.11 | 0.73 | 0.82 | 4.65 | 3.2 | 0.006 | 0.89 | 1.0 | 0.05 | 15.38 | 0.00 | 2.142 | 11.32 | 2.83 | 3.1 | 96.9 | 0.0 | 0.07 | 1.34 | 0.73 | 0.85 | 3.34 | 17286 | 2154 | 18 | 0 | 18 | 0 | 0 | logfile |
✔ | 8Q3N | 18130 | 2024-07-22 | 2023-08-04 | 2.63 | 3.29 | 2.65 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 16.08 | 0.00 | 1.991 | 9.33 | 1.54 | 1.6 | 98.4 | 0.0 | 0.95 | 0.86 | 0.85 | 2.16 | 3.0 | 0.003 | 0.65 | 0.0 | 0.04 | 15.90 | 0.00 | 1.980 | 10.07 | 2.14 | 2.0 | 98.0 | 0.0 | 1.11 | 1.21 | 0.86 | 0.89 | 2.17 | 19912 | 2508 | 12 | 0 | 10 | 0 | 0 | logfile |
✔ | 8TP3 | 41465 | 2024-07-21 | 2023-08-04 | 3.6 | 3.91 | 3.62 | 3.9 | 0.020 | 1.72 | 0.0 | 0.11 | 10.55 | 0.01 | 2.336 | 0.86 | 0.07 | 1.7 | 98.3 | 0.0 | 0.78 | 0.72 | 0.73 | 2.35 | 3.9 | 0.004 | 0.73 | 0.0 | 0.05 | 15.00 | 0.00 | 2.164 | 13.17 | 2.77 | 2.8 | 97.2 | 0.0 | 0.07 | 1.48 | 0.73 | 0.73 | 1.77 | 13691 | 1700 | 14 | 0 | 20 | 0 | 0 | logfile |
✔ | 8TP6 | 41468 | 2024-07-22 | 2023-08-04 | 3.1 | 3.47 | 3.28 | 3.4 | 0.021 | 1.77 | 3.0 | 0.11 | 11.87 | 0.01 | 2.326 | 2.28 | 0.00 | 1.2 | 98.8 | 0.0 | 1.02 | 0.74 | 0.80 | 3.71 | 3.4 | 0.004 | 0.85 | 1.0 | 0.05 | 14.37 | 0.00 | 2.116 | 11.93 | 1.56 | 4.1 | 95.9 | 0.0 | 0.11 | 1.80 | 0.72 | 0.81 | 2.81 | 17008 | 2126 | 18 | 0 | 27 | 0 | 0 | logfile |
✔ | 8TP4 | 41466 | 2024-07-21 | 2023-08-04 | 3.3 | 3.25 | 3.26 | 3.4 | 0.020 | 1.77 | 7.0 | 0.10 | 10.27 | 0.02 | 2.221 | 2.95 | 0.00 | 2.6 | 97.4 | 0.0 | 0.69 | 0.79 | 0.84 | 3.98 | 3.3 | 0.005 | 0.66 | 0.0 | 0.04 | 14.64 | 0.00 | 2.095 | 6.33 | 2.26 | 3.7 | 96.2 | 0.1 | 0.20 | 0.73 | 0.80 | 0.87 | 3.21 | 13472 | 1678 | 11 | 0 | 18 | 0 | 0 | logfile |
✔ | 8TP7 | 41469 | 2024-07-22 | 2023-08-04 | 2.8 | 3.07 | 2.89 | 3.1 | 0.021 | 1.80 | 0.0 | 0.10 | 10.25 | 0.01 | 1.987 | 1.53 | 0.00 | 1.7 | 98.3 | 0.0 | 0.83 | 0.76 | 0.85 | 4.78 | 3.1 | 0.002 | 0.55 | 0.0 | 0.04 | 14.92 | 0.00 | 2.171 | 5.29 | 2.42 | 2.5 | 97.5 | 0.0 | 0.66 | 1.35 | 0.70 | 0.84 | 3.87 | 17010 | 2145 | 15 | 0 | 18 | 0 | 0 | logfile |
✔ | 8Q3K | 18129 | 2024-07-25 | 2023-08-04 | 2.92 | 3.31 | — | 3.1 | 0.003 | 0.51 | 0.0 | 0.04 | 14.83 | 0.00 | 1.824 | 5.45 | 0.15 | 2.0 | 98.0 | 0.0 | 0.61 | 0.80 | 0.90 | 3.50 | 3.1 | 0.005 | 0.77 | 1.0 | 0.05 | 15.89 | 0.00 | 1.999 | 10.28 | 1.73 | 2.6 | 97.4 | 0.0 | 0.68 | 0.92 | 0.78 | 0.89 | 3.01 | 28932 | 3633 | 12 | 0 | 7 | 0 | 0 | logfile |
✔ | 8Q3F | 18126 | 2024-07-18 | 2023-08-04 | 3.77 | 4.64 | 3.79 | 4.2 | 0.005 | 1.12 | 0.0 | 0.07 | 15.05 | 0.01 | 2.339 | 3.11 | 0.00 | 3.1 | 96.9 | 0.0 | -5.05 | 0.90 | 0.81 | 0.79 | 4.2 | 0.003 | 0.60 | 0.0 | 0.04 | 15.72 | 0.00 | 2.283 | 7.13 | 0.59 | 2.8 | 97.2 | 0.0 | 1.18 | 0.93 | 0.90 | 0.82 | 0.86 | 4599 | 578 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8KAE | 37008 | 2024-07-19 | 2023-08-03 | 3.18 | 3.46 | 3.28 | 3.5 | 0.013 | 1.06 | 0.0 | 0.06 | 13.54 | 0.01 | 2.147 | 7.23 | 0.00 | 7.2 | 92.8 | 0.0 | -1.16 | 0.61 | 0.81 | 3.21 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 14.41 | 0.00 | 2.209 | 6.10 | 2.75 | 4.0 | 96.0 | 0.0 | 1.07 | 1.17 | 0.62 | 0.82 | 1.91 | 8440 | 1105 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8ToA | 41441 | 2024-07-24 | 2023-08-03 | 3.69 | 4.05 | 3.88 | 4.0 | 0.007 | 1.08 | 0.0 | 0.06 | 14.71 | 0.01 | 1.051 | 12.20 | 1.62 | 7.4 | 92.3 | 0.3 | -2.84 | 0.71 | 0.63 | 1.41 | 3.9 | 0.009 | 0.97 | 0.0 | 0.05 | 16.32 | 0.01 | 1.991 | 32.44 | 3.51 | 11.0 | 88.8 | 0.1 | -2.58 | 1.16 | 0.76 | 0.79 | 1.32 | 16570 | 2109 | 15 | 0 | 11 | 0 | 0 | logfile |
✔ | 8ToB | 41442 | 2024-07-23 | 2023-08-03 | 3.14 | 3.34 | 2.61 | 2.9 | 0.002 | 0.45 | 0.0 | 0.04 | 13.68 | 0.00 | 2.194 | 4.63 | 0.00 | 3.1 | 96.9 | 0.1 | 0.69 | 0.78 | 0.93 | 4.49 | 2.9 | 0.002 | 0.46 | 0.0 | 0.04 | 14.94 | 0.00 | 2.189 | 5.61 | 1.26 | 2.8 | 97.2 | 0.0 | 1.18 | 0.25 | 0.78 | 0.94 | 4.01 | 22242 | 3058 | 44 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q3B | 18120 | 2024-07-25 | 2023-08-03 | 2.69 | 3.40 | 2.70 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 15.89 | 0.00 | 1.424 | 4.67 | 0.52 | 2.0 | 98.0 | 0.0 | 0.94 | 0.79 | 0.89 | 3.59 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 16.49 | 0.00 | 2.130 | 7.52 | 1.51 | 2.1 | 97.9 | 0.0 | 0.93 | 0.36 | 0.67 | 0.80 | 3.38 | 29389 | 3724 | 12 | 0 | 7 | 0 | 0 | logfile |