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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PiL | 17685 | 2024-07-25 | 2023-06-22 | 3.2 | 3.85 | 3.34 | 3.5 | 0.002 | 0.50 | 0.0 | 0.04 | 18.90 | 0.00 | 1.621 | 9.64 | 0.19 | 2.6 | 97.4 | 0.0 | 1.07 | 0.89 | 0.83 | 1.55 | 3.5 | 0.002 | 0.52 | 0.0 | 0.04 | 19.11 | 0.00 | 2.023 | 10.27 | 2.40 | 3.1 | 96.9 | 0.0 | 0.93 | 0.31 | 0.90 | 0.89 | 1.70 | 30440 | 3656 | 11 | 84 | 3 | 0 | 0 | logfile |
✔ | 8JTX | 36655 | 2024-07-18 | 2023-06-22 | 3.28 | 3.65 | 3.31 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 15.90 | 0.00 | 2.297 | 2.73 | 0.46 | 3.9 | 96.1 | 0.0 | -1.20 | 0.56 | 0.78 | 1.80 | 3.6 | 0.002 | 0.57 | 0.0 | 0.04 | 16.42 | 0.00 | 2.257 | 2.97 | 4.17 | 4.3 | 95.7 | 0.0 | -0.40 | 0.30 | 0.62 | 0.81 | 1.93 | 4253 | 566 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JTW | 36654 | 2024-07-18 | 2023-06-22 | 3.23 | 3.56 | 3.23 | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 13.05 | 0.00 | 2.309 | 2.70 | 0.00 | 4.3 | 95.7 | 0.0 | 0.14 | 0.57 | 0.76 | 1.88 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.73 | 0.00 | 2.294 | 4.58 | 1.14 | 6.1 | 93.9 | 0.0 | 0.40 | 0.30 | 0.56 | 0.79 | 1.42 | 4282 | 566 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JTS | 36651 | 2024-07-18 | 2023-06-22 | 4.14 | 4.41 | 3.90 | 4.4 | 0.008 | 0.93 | 0.0 | 0.05 | 14.11 | 0.02 | 2.249 | 8.90 | 0.31 | 5.0 | 95.0 | 0.0 | -0.32 | 0.53 | 0.67 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 13.96 | 0.00 | 2.200 | 9.82 | 0.00 | 4.2 | 95.8 | 0.0 | 1.27 | 1.14 | 0.53 | 0.66 | — | 3330 | 461 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8T8F | 41098 | 2024-07-21 | 2023-06-22 | 4.8 | 5.11 | 4.71 | 4.7 | 0.003 | 0.75 | 1.0 | 0.05 | 13.37 | 0.00 | 2.201 | 18.73 | 0.14 | 7.3 | 92.7 | 0.0 | -1.53 | 0.76 | 0.63 | — | 4.7 | 0.003 | 0.70 | 0.0 | 0.04 | 13.86 | 0.00 | 2.130 | 16.13 | 0.07 | 7.5 | 92.5 | 0.0 | -0.71 | 0.77 | 0.77 | 0.67 | — | 13050 | 1623 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JTV | 36653 | 2024-07-18 | 2023-06-22 | 3.77 | 4.24 | 3.67 | 4.2 | 0.006 | 0.66 | 0.0 | 0.04 | 12.16 | 0.01 | 2.293 | 8.08 | 0.36 | 4.2 | 95.8 | 0.0 | 0.62 | 0.51 | 0.62 | 0.67 | 4.2 | 0.003 | 0.65 | 0.0 | 0.04 | 15.13 | 0.00 | 2.301 | 9.27 | 3.61 | 4.6 | 95.4 | 0.0 | 1.20 | 0.38 | 0.50 | 0.65 | 0.67 | 3067 | 437 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PiD | 17681 | 2024-07-25 | 2023-06-21 | 3.0 | 3.69 | 3.02 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 18.10 | 0.00 | 1.935 | 7.85 | 0.28 | 2.4 | 97.6 | 0.0 | 1.18 | 0.92 | 0.87 | 2.01 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 18.44 | 0.00 | 2.018 | 9.42 | 2.05 | 2.9 | 97.1 | 0.0 | 0.83 | 0.34 | 0.91 | 0.90 | 2.00 | 28297 | 3371 | 10 | 90 | 3 | 0 | 0 | logfile |
✔ | 8T7S | 41093 | 2024-07-26 | 2023-06-21 | 3.01 | 3.18 | 3.11 | 3.0 | 0.013 | 2.02 | 23.0 | 0.14 | 19.06 | 0.02 | 2.028 | 4.86 | 0.89 | 3.1 | 96.9 | 0.0 | -1.84 | 0.79 | 0.66 | 2.27 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 19.32 | 0.00 | 2.021 | 13.36 | 1.54 | 2.5 | 97.5 | 0.0 | 0.51 | 1.09 | 0.86 | 0.87 | 2.82 | 24994 | 2469 | 10 | 239 | 5 | 2 | 0 | logfile |
✔ | 8PiB | 17679 | 2024-07-25 | 2023-06-21 | 2.6 | 3.25 | 2.65 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 19.35 | 0.00 | 1.982 | 10.01 | 2.65 | 2.6 | 97.3 | 0.1 | 0.93 | 0.89 | 0.88 | 1.85 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 19.45 | 0.00 | 1.967 | 10.59 | 2.62 | 3.1 | 96.8 | 0.1 | 0.89 | 0.29 | 0.90 | 0.89 | 2.11 | 27848 | 3316 | 10 | 92 | 2 | 0 | 0 | logfile |
✔ | 8JTB | 36639 | 2024-07-18 | 2023-06-21 | 2.93 | 3.11 | 2.90 | 3.2 | 0.006 | 0.94 | 1.0 | 0.06 | 15.62 | 0.01 | 2.211 | 5.58 | 1.35 | 1.1 | 98.4 | 0.5 | 0.86 | 0.63 | 0.86 | 1.40 | 3.2 | 0.004 | 0.70 | 0.0 | 0.04 | 16.60 | 0.01 | 2.191 | 3.31 | 2.36 | 1.9 | 98.1 | 0.0 | 1.89 | 0.93 | 0.62 | 0.86 | 0.87 | 2808 | 376 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PiJ | 17683 | 2024-07-18 | 2023-06-21 | 2.9 | 3.58 | 2.88 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 18.97 | 0.00 | 2.231 | 3.93 | 3.46 | 3.2 | 96.8 | 0.0 | 0.25 | 0.34 | 0.89 | 2.62 | 3.3 | 0.002 | 0.63 | 0.0 | 0.04 | 16.72 | 0.00 | 2.232 | 6.70 | 3.03 | 2.5 | 97.5 | 0.0 | 0.77 | 1.03 | 0.32 | 0.89 | 2.81 | 2191 | 288 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 8JTC | 36640 | 2024-07-18 | 2023-06-21 | 3.52 | 3.71 | 3.55 | 3.7 | 0.007 | 0.94 | 0.0 | 0.05 | 14.32 | 0.01 | 2.240 | 7.41 | 0.33 | 3.4 | 96.6 | 0.0 | 1.13 | 0.56 | 0.81 | 1.82 | 3.7 | 0.004 | 0.72 | 0.0 | 0.04 | 15.01 | 0.01 | 2.323 | 8.93 | 3.29 | 3.1 | 96.9 | 0.0 | 2.22 | 0.29 | 0.57 | 0.81 | 1.69 | 2941 | 391 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JTJ | 36646 | 2024-07-20 | 2023-06-21 | 3.08 | 3.34 | 3.25 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 20.10 | 0.01 | 2.112 | 9.23 | 0.00 | 7.6 | 91.9 | 0.5 | -1.45 | 0.69 | 0.73 | 2.54 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 20.91 | 0.00 | 2.165 | 10.33 | 2.79 | 8.3 | 91.4 | 0.3 | -1.09 | 0.56 | 0.72 | 0.80 | 2.05 | 11637 | 1042 | 4 | 145 | 0 | 0 | 0 | logfile |
✔ | 8JT5 | 36633 | 2024-07-18 | 2023-06-21 | 3.06 | 3.30 | 3.09 | 3.3 | 0.005 | 0.81 | 1.0 | 0.05 | 15.38 | 0.01 | 2.268 | 6.88 | 1.67 | 2.1 | 97.6 | 0.3 | 1.66 | 0.61 | 0.85 | 2.09 | 3.3 | 0.004 | 0.70 | 0.0 | 0.04 | 15.85 | 0.01 | 2.344 | 7.74 | 4.33 | 1.6 | 98.4 | 0.0 | 1.89 | 0.90 | 0.57 | 0.84 | 1.64 | 2854 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JTA | 36638 | 2024-07-18 | 2023-06-21 | 3.36 | 3.64 | 3.38 | 3.6 | 0.013 | 1.26 | 0.0 | 0.07 | 14.05 | 0.01 | 2.320 | 7.70 | 2.67 | 5.5 | 94.5 | 0.0 | -2.72 | 0.63 | 0.85 | 1.70 | 3.6 | 0.004 | 0.76 | 0.0 | 0.04 | 15.72 | 0.01 | 2.293 | 7.02 | 4.33 | 3.9 | 96.1 | 0.0 | 1.16 | 0.47 | 0.62 | 0.87 | 1.47 | 2879 | 386 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JT9 | 36637 | 2024-07-18 | 2023-06-21 | 2.97 | 1.96 | 2.94 | 3.3 | 0.007 | 0.76 | 0.0 | 0.04 | 15.91 | 0.01 | 2.246 | 5.16 | 0.67 | 0.8 | 99.2 | 0.0 | 2.28 | 0.56 | 0.88 | 2.70 | 3.3 | 0.003 | 0.75 | 0.0 | 0.04 | 15.97 | 0.01 | 2.273 | 7.05 | 2.34 | 1.1 | 98.9 | 0.0 | 2.42 | 0.90 | 0.54 | 0.87 | 2.73 | 2872 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JTD | 36641 | 2024-07-22 | 2023-06-21 | 4.9 | 4.51 | 4.64 | 4.6 | 0.005 | 0.93 | 0.0 | 0.07 | 17.49 | 0.00 | 2.048 | 20.29 | 0.00 | 3.8 | 96.1 | 0.1 | -0.29 | 0.63 | 0.55 | — | 4.6 | 0.003 | 0.78 | 0.0 | 0.05 | 12.46 | 0.00 | 2.122 | 17.40 | 0.00 | 4.1 | 95.9 | 0.0 | -0.36 | 0.61 | 0.66 | 0.63 | — | 17275 | 1978 | 51 | 0 | 128 | 0 | 0 | logfile |
✔ | 8JSW | 36628 | 2024-07-18 | 2023-06-20 | 2.84 | 3.08 | 2.88 | 3.1 | 0.009 | 0.91 | 0.0 | 0.05 | 14.55 | 0.01 | 2.277 | 4.12 | 0.67 | 2.6 | 97.4 | 0.0 | -0.02 | 0.67 | 0.86 | 2.03 | 3.1 | 0.003 | 0.69 | 0.0 | 0.04 | 15.42 | 0.01 | 2.236 | 4.29 | 2.00 | 2.4 | 97.6 | 0.0 | 1.42 | 0.32 | 0.62 | 0.85 | 2.54 | 2859 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JSN | 36624 | 2024-07-21 | 2023-06-20 | 3.4 | 3.48 | 3.33 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 15.44 | 0.00 | 2.234 | 5.28 | 0.06 | 5.7 | 93.9 | 0.5 | 0.77 | 0.78 | 0.85 | 2.32 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.76 | 0.00 | 2.196 | 6.17 | 1.29 | 5.4 | 94.1 | 0.5 | 1.09 | 0.32 | 0.80 | 0.88 | 2.25 | 14856 | 1856 | 7 | 10 | 1 | 0 | 0 | logfile |
✔ | 8JSH | 36620 | 2024-07-26 | 2023-06-20 | 4.4 | 7.17 | 4.35 | 3.5 | 0.004 | 0.73 | 0.0 | 0.04 | 26.04 | 0.00 | 1.974 | 26.44 | 0.00 | 7.1 | 92.5 | 0.4 | -1.35 | 0.86 | 0.79 | — | 3.4 | 0.006 | 0.84 | 0.0 | 0.04 | 25.60 | 0.01 | 1.976 | 40.95 | 0.00 | 10.2 | 89.5 | 0.3 | -1.51 | 1.47 | 0.86 | 0.81 | — | 34331 | 1432 | 14 | 1074 | 0 | 0 | 0 | logfile |