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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8T79 | 41088 | 2024-07-20 | 2023-06-20 | 3.04 | 3.75 | 3.11 | 3.5 | 0.005 | 1.00 | 0.0 | 0.05 | 18.70 | 0.01 | 2.231 | 5.49 | 0.39 | 2.6 | 97.4 | 0.0 | -1.59 | 0.80 | 0.83 | 2.31 | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 18.76 | 0.00 | 2.192 | 10.75 | 2.13 | 3.5 | 96.5 | 0.0 | 0.50 | 0.44 | 0.80 | 0.83 | 2.29 | 11903 | 1146 | 4 | 118 | 0 | 0 | 0 | logfile |
✔ | 8JSP | 36626 | 2024-07-19 | 2023-06-20 | 3.65 | 3.82 | 3.55 | 3.8 | 0.006 | 0.79 | 0.0 | 0.05 | 14.06 | 0.00 | 2.204 | 13.73 | 0.86 | 5.9 | 94.1 | 0.0 | -0.89 | 0.61 | 0.71 | 1.51 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 15.96 | 0.00 | 2.202 | 9.35 | 3.24 | 3.8 | 96.2 | 0.0 | -0.02 | 1.06 | 0.63 | 0.71 | 1.08 | 8599 | 1102 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JSM | 36623 | 2024-07-21 | 2023-06-20 | 3.3 | 3.40 | 3.24 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 15.38 | 0.00 | 2.050 | 5.08 | 0.06 | 5.7 | 94.0 | 0.3 | 0.89 | 0.77 | 0.86 | 2.59 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 16.83 | 0.00 | 2.145 | 5.69 | 1.35 | 5.9 | 93.8 | 0.3 | 1.17 | 1.69 | 0.79 | 0.89 | 2.27 | 14856 | 1856 | 7 | 10 | 1 | 0 | 0 | logfile |
✔ | 8JSW | 36628 | 2024-07-18 | 2023-06-20 | 2.84 | 3.08 | 2.88 | 3.1 | 0.009 | 0.91 | 0.0 | 0.05 | 14.55 | 0.01 | 2.277 | 4.12 | 0.67 | 2.6 | 97.4 | 0.0 | -0.02 | 0.67 | 0.86 | 2.03 | 3.1 | 0.003 | 0.69 | 0.0 | 0.04 | 15.42 | 0.01 | 2.236 | 4.29 | 2.00 | 2.4 | 97.6 | 0.0 | 1.42 | 0.32 | 0.62 | 0.85 | 2.54 | 2859 | 384 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8PHK | 17668 | 2024-07-25 | 2023-06-20 | 3.1 | 3.76 | 3.20 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 18.81 | 0.00 | 2.027 | 9.67 | 0.10 | 2.5 | 97.4 | 0.0 | 1.00 | 0.91 | 0.85 | 1.06 | 3.4 | 0.004 | 0.57 | 0.0 | 0.04 | 18.96 | 0.00 | 1.981 | 10.03 | 2.26 | 3.2 | 96.8 | 0.0 | 0.94 | 0.66 | 0.92 | 0.90 | 1.73 | 28225 | 3370 | 10 | 88 | 3 | 0 | 0 | logfile |
✔ | 8T7E | 41091 | 2024-07-21 | 2023-06-20 | 3.08 | 3.40 | 3.07 | 3.3 | 0.005 | 1.09 | 0.0 | 0.06 | 18.22 | 0.01 | 2.288 | 6.80 | 0.69 | 7.6 | 92.3 | 0.1 | -2.94 | 0.70 | 0.63 | 1.75 | 3.3 | 0.003 | 0.80 | 0.0 | 0.06 | 19.42 | 0.00 | 2.178 | 15.78 | 2.43 | 8.5 | 91.2 | 0.2 | -1.20 | 0.60 | 0.75 | 0.76 | 1.94 | 14273 | 1706 | 5 | 36 | 0 | 0 | 0 | logfile |
✔ | 8JSX | 36629 | 2024-07-18 | 2023-06-20 | 3.16 | 3.39 | 3.12 | 3.4 | 0.005 | 0.84 | 0.0 | 0.06 | 15.28 | 0.01 | 2.440 | 3.46 | 1.00 | 2.1 | 97.9 | 0.0 | 2.26 | 0.64 | 0.87 | 2.00 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 15.87 | 0.01 | 2.334 | 2.94 | 2.67 | 2.4 | 97.6 | 0.0 | 2.36 | 0.30 | 0.62 | 0.87 | 0.91 | 2828 | 378 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8JSL | 36622 | 2024-07-21 | 2023-06-20 | 2.95 | 3.14 | 2.85 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 14.70 | 0.00 | 2.203 | 3.93 | 0.00 | 6.2 | 93.4 | 0.5 | 0.78 | 0.77 | 0.88 | 2.99 | 3.1 | 0.003 | 0.62 | 0.0 | 0.04 | 16.83 | 0.00 | 2.184 | 4.72 | 1.89 | 6.2 | 93.4 | 0.5 | 1.02 | 0.91 | 0.77 | 0.90 | 2.63 | 14069 | 1751 | 7 | 10 | 1 | 0 | 0 | logfile |
✔ | 8PHo | 17669 | 2024-07-26 | 2023-06-20 | 2.34 | 2.07 | 2.33 | 2.2 | 0.005 | 0.77 | 0.0 | 0.06 | 13.64 | 0.01 | 2.128 | 1.78 | 0.00 | 1.0 | 99.0 | 0.0 | -0.02 | 0.73 | 0.85 | 3.99 | 2.2 | 0.002 | 0.49 | 0.0 | 0.04 | 16.98 | 0.00 | 2.206 | 2.70 | 0.89 | 0.3 | 99.7 | 0.0 | 1.42 | 0.48 | 0.72 | 0.85 | 4.44 | 32172 | 3804 | 24 | 0 | 0 | 720 | 0 | logfile |
✔ | 8JSN | 36624 | 2024-07-21 | 2023-06-20 | 3.4 | 3.48 | 3.33 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 15.44 | 0.00 | 2.234 | 5.28 | 0.06 | 5.7 | 93.9 | 0.5 | 0.77 | 0.78 | 0.85 | 2.32 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.76 | 0.00 | 2.196 | 6.17 | 1.29 | 5.4 | 94.1 | 0.5 | 1.09 | 0.32 | 0.80 | 0.88 | 2.25 | 14856 | 1856 | 7 | 10 | 1 | 0 | 0 | logfile |
✔ | 8T7A | 41089 | 2024-07-21 | 2023-06-20 | 2.8 | 2.99 | 2.78 | 3.0 | 0.005 | 0.71 | 0.0 | 0.05 | 13.49 | 0.01 | 2.212 | 7.47 | 0.66 | 2.0 | 98.0 | 0.0 | 0.46 | 0.70 | 0.83 | 3.76 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 15.33 | 0.00 | 2.169 | 5.70 | 3.81 | 1.5 | 98.5 | 0.0 | 0.99 | 0.33 | 0.70 | 0.85 | 3.67 | 15819 | 2040 | 15 | 0 | 3 | 0 | 0 | logfile |
✔ | 8JSH | 36620 | 2024-07-26 | 2023-06-20 | 4.4 | 7.17 | 4.35 | 3.5 | 0.004 | 0.73 | 0.0 | 0.04 | 26.04 | 0.00 | 1.974 | 26.44 | 0.00 | 7.1 | 92.5 | 0.4 | -1.35 | 0.86 | 0.79 | — | 3.4 | 0.006 | 0.84 | 0.0 | 0.04 | 25.60 | 0.01 | 1.976 | 40.95 | 0.00 | 10.2 | 89.5 | 0.3 | -1.51 | 1.47 | 0.86 | 0.81 | — | 34331 | 1432 | 14 | 1074 | 0 | 0 | 0 | logfile |
✔ | 8T6Y | 41084 | 2024-07-20 | 2023-06-19 | 2.88 | 3.64 | 2.96 | 3.4 | 0.005 | 0.98 | 0.0 | 0.05 | 18.64 | 0.01 | 2.209 | 4.32 | 1.13 | 1.9 | 98.1 | 0.0 | -1.21 | 0.81 | 0.84 | 2.74 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 18.95 | 0.00 | 2.195 | 8.73 | 2.36 | 2.6 | 97.4 | 0.0 | 0.98 | 0.51 | 0.81 | 0.85 | 2.61 | 11482 | 1148 | 4 | 109 | 0 | 0 | 0 | logfile |
✔ | 8T78 | 41087 | 2024-07-20 | 2023-06-19 | 3.02 | 3.65 | 3.08 | 3.5 | 0.007 | 1.07 | 0.0 | 0.06 | 19.85 | 0.01 | 2.181 | 4.81 | 0.51 | 2.5 | 97.5 | 0.0 | -0.99 | 0.75 | 0.84 | 2.70 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 19.68 | 0.00 | 2.127 | 8.52 | 2.70 | 3.1 | 96.9 | 0.0 | 0.81 | 0.67 | 0.76 | 0.85 | 2.75 | 9561 | 863 | 4 | 116 | 0 | 0 | 0 | logfile |
✔ | 8JS8 | 36616 | 2024-07-19 | 2023-06-19 | 2.88 | 3.06 | — | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 16.36 | 0.00 | 2.188 | 7.56 | 2.28 | 3.1 | 96.9 | 0.0 | 0.62 | 0.62 | 0.84 | 2.55 | 3.1 | 0.003 | 0.53 | 0.0 | 0.04 | 16.55 | 0.00 | 2.183 | 7.25 | 2.16 | 2.9 | 97.1 | 0.0 | 1.30 | 0.35 | 0.61 | 0.84 | 2.81 | 8189 | 1012 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8T76 | 41085 | 2024-07-21 | 2023-06-19 | 3.42 | 4.21 | 3.53 | 3.5 | 0.005 | 1.02 | 0.0 | 0.05 | 18.99 | 0.01 | 2.278 | 4.93 | 0.32 | 2.5 | 97.5 | 0.0 | -1.23 | 0.83 | 0.73 | 1.19 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 19.41 | 0.00 | 2.182 | 15.94 | 1.51 | 3.2 | 96.8 | 0.0 | 0.22 | 1.40 | 0.84 | 0.77 | 1.02 | 11049 | 1088 | 4 | 111 | 0 | 0 | 0 | logfile |
✔ | 8JS9 | 36617 | 2024-07-19 | 2023-06-19 | 3.01 | 3.19 | — | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 15.24 | 0.00 | 2.136 | 7.19 | 0.23 | 3.2 | 96.8 | 0.0 | 0.68 | 0.62 | 0.85 | 3.09 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 15.33 | 0.00 | 2.098 | 6.70 | 1.71 | 2.6 | 97.4 | 0.0 | 0.90 | 0.29 | 0.59 | 0.84 | 3.07 | 8177 | 1012 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 8T6X | 41083 | 2024-07-21 | 2023-06-19 | 3.08 | 3.82 | 3.16 | 3.4 | 0.004 | 0.72 | 0.0 | 0.04 | 19.03 | 0.01 | 2.015 | 3.89 | 0.26 | 2.2 | 97.8 | 0.0 | -0.80 | 0.85 | 0.84 | 2.74 | 3.5 | 0.003 | 0.50 | 0.0 | 0.03 | 19.09 | 0.00 | 1.935 | 9.15 | 1.13 | 2.0 | 98.0 | 0.0 | 0.87 | 1.68 | 0.86 | 0.87 | 2.57 | 13443 | 1278 | 6 | 139 | 3 | 0 | 0 | logfile |
✔ | 8T77 | 41086 | 2024-07-20 | 2023-06-19 | 3.25 | 4.12 | 3.33 | 3.5 | 0.005 | 0.99 | 0.0 | 0.05 | 19.38 | 0.01 | 2.153 | 5.83 | 0.78 | 2.1 | 97.9 | 0.0 | -1.56 | 0.83 | 0.76 | 1.81 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 19.64 | 0.00 | 2.190 | 15.83 | 2.88 | 3.3 | 96.7 | 0.0 | -0.12 | 0.75 | 0.84 | 0.79 | 1.40 | 10745 | 1025 | 4 | 114 | 0 | 0 | 0 | logfile |
✔ | 8PHF | 17660 | 2024-07-19 | 2023-06-19 | 3.6 | 3.88 | 3.58 | 4.0 | 0.004 | 0.65 | 0.0 | 0.04 | 16.42 | 0.00 | 2.134 | 11.77 | 0.11 | 4.6 | 95.4 | 0.0 | 0.67 | 0.67 | 0.71 | 1.88 | 3.9 | 0.003 | 0.57 | 0.0 | 0.04 | 17.10 | 0.00 | 2.165 | 9.06 | 2.17 | 3.1 | 96.9 | 0.0 | 1.30 | 0.48 | 0.66 | 0.71 | 1.63 | 8640 | 1094 | 4 | 0 | 2 | 0 | 0 | logfile |