Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7UWA	26826	2024-02-24	2022-05-03	4.3	4.39	4.41	2.3	0.003	0.61	1.0	0.04	10.20	0.00	2.202	7.93	1.05	3.8	96.1	0.0	2.06	0.79	0.79	—	2.1	0.004	0.58	0.0	0.04	10.13	0.00	2.120	9.04	0.00	5.7	94.3	0.0	2.06	1.63	0.82	0.83	—	46194	7772	31	0	56	0	0	logfile
✔	7UWM	26836	2024-02-13	2022-05-03	2.5	2.14	2.51	1.9	0.004	0.59	0.0	0.04	17.88	0.00	2.107	6.68	2.96	3.0	97.0	0.0	-0.69	0.80	0.79	2.42	1.8	0.004	0.61	0.0	0.05	17.82	0.00	2.115	8.15	5.05	3.8	96.2	0.0	-0.66	0.23	0.80	0.80	2.51	7972	967	9	0	9	0	0	logfile
✔	7UWK	26834	2024-02-16	2022-05-03	4.4	3.30	4.35	2.2	0.004	0.80	0.0	0.05	12.35	0.01	2.131	18.13	0.11	5.0	95.0	0.0	-1.76	0.66	0.54	—	2.3	0.004	0.78	0.0	0.05	12.79	0.01	2.098	20.82	0.06	7.0	93.0	0.0	-1.88	1.85	0.66	0.57	—	16064	2059	12	0	0	0	0	logfile
✔	7UWC	26828	2024-02-24	2022-05-03	4.0	4.38	4.18	2.5	0.005	0.70	1.0	0.05	10.20	0.00	2.216	5.60	0.50	5.0	94.8	0.2	1.98	0.76	0.74	—	2.3	0.002	0.54	0.0	0.04	11.38	0.00	2.129	6.46	1.34	4.0	95.9	0.1	2.35	0.37	0.82	0.84	—	46123	7764	31	0	56	0	0	logfile
✔	7ZR8	14886	2024-02-13	2022-05-03	3.7	3.81	3.43	3.8	0.003	0.46	0.0	0.04	8.42	0.00	2.181	7.02	0.74	3.9	96.1	0.0	-0.94	0.72	0.82	2.69	3.8	0.004	0.58	0.0	0.04	12.94	0.00	2.179	10.32	3.47	4.9	95.1	0.0	-0.91	0.49	0.72	0.82	2.17	3693	471	4	0	1	0	0	logfile
✔	7UWF	26831	2024-02-15	2022-05-03	2.7	2.78	2.77	2.7	0.004	0.62	0.0	0.04	12.06	0.01	2.127	6.27	0.00	3.0	97.0	0.0	1.46	0.77	0.82	2.47	2.7	0.004	0.65	0.0	0.04	15.60	0.00	2.060	7.63	2.08	3.0	97.0	0.0	1.77	0.37	0.78	0.85	2.66	13174	1760	4	0	0	0	0	logfile
✔	7UWN	26837	2024-02-15	2022-05-03	3.01	2.26	3.04	1.6	0.004	0.64	0.0	0.04	16.39	0.00	2.105	14.51	2.21	6.1	93.9	0.0	-1.09	0.66	0.63	1.06	1.5	0.003	0.59	0.0	0.04	16.58	0.00	2.136	12.43	4.68	5.3	94.7	0.0	-0.89	0.30	0.66	0.63	0.69	10602	1325	12	0	11	0	0	logfile
✔	7UWH	26832	2024-02-20	2022-05-03	3.1	3.48	3.32	3.3	0.003	0.70	0.0	0.05	15.82	0.00	2.114	11.51	0.81	5.5	94.3	0.1	-0.96	0.81	0.77	2.03	3.3	0.003	0.60	0.0	0.04	16.76	0.00	1.913	10.66	1.82	5.1	94.9	0.0	-0.19	1.66	0.85	0.87	1.94	27927	3362	10	80	3	0	0	logfile
✔	7ZR6	14884	2024-02-17	2022-05-03	4.2	2.74	4.56	3.4	0.003	0.79	0.0	0.05	14.74	0.00	2.106	16.41	0.00	7.7	92.0	0.3	-1.90	0.65	0.64	—	2.3	0.003	0.70	0.0	0.04	14.94	0.01	2.128	12.84	0.00	8.4	91.4	0.2	-1.64	1.09	0.69	0.63	—	17700	2168	7	0	2	0	0	logfile
✔	7UW1	26822	2024-02-20	2022-05-02	2.21	2.62	—	2.4	0.011	0.64	1.0	0.04	23.22	0.02	1.976	4.30	1.92	2.1	97.7	0.2	0.86	0.92	0.93	4.76	2.4	0.007	0.69	0.0	0.04	22.86	0.01	1.831	4.26	2.86	2.6	97.2	0.1	0.81	0.74	0.92	0.94	4.73	137191	5510	57	4369	14	5	0	logfile
✔	7UVY	26820	2024-02-20	2022-05-02	2.39	2.77	—	2.6	0.011	0.70	0.0	0.04	23.44	0.02	1.926	4.93	2.41	2.5	97.2	0.2	0.67	0.92	0.93	4.40	2.6	0.007	0.71	0.0	0.04	22.94	0.01	1.744	4.97	3.48	3.1	96.7	0.2	0.59	0.18	0.92	0.94	4.26	138881	5512	60	4447	14	5	0	logfile
✔	7UVP	26815	2024-02-13	2022-05-02	3.7	3.39	3.39	3.5	0.002	0.51	0.0	0.04	15.71	0.00	1.942	7.42	0.00	5.0	95.0	0.0	-1.10	0.61	0.77	2.40	3.5	0.005	0.60	0.0	0.05	17.60	0.00	1.817	11.31	4.24	6.6	93.4	0.0	-1.16	1.12	0.62	0.77	2.47	5671	718	1	0	2	1	0	logfile
✔	7UW5	26823	2024-02-22	2022-05-02	3.84	2.49	3.83	3.3	0.002	0.50	0.0	0.04	14.55	0.00	2.218	5.79	0.35	1.6	98.4	0.0	4.16	0.72	0.68	1.15	2.2	0.003	0.64	1.0	0.04	15.64	0.00	2.144	6.04	6.82	1.8	98.0	0.2	3.86	0.46	0.72	0.68	1.25	32340	5061	7	0	0	0	0	logfile
✔	7UVT	26816	2024-02-15	2022-05-02	3.9	4.17	4.00	4.1	0.001	0.41	0.0	0.02	24.65	0.00	1.897	6.61	0.00	0.0	0.0	0.0	—	0.76	0.74	—	4.1	0.006	0.72	0.0	0.04	24.99	0.01	1.910	21.92	0.00	0.0	0.0	0.0	—	0.48	0.77	0.77	—	12409	0	1	386	0	0	4149	logfile
✘	7UVX	26819	2024-02-19	2022-05-02	2.35	2.56	—	2.4	0.005	0.61	0.0	0.04	23.01	0.02	2.144	4.47	2.57	2.3	97.5	0.2	0.69	0.91	0.91	3.97	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	136470	5510	53	4358	2	0	0	logfile
✔	7UVL	26813	2024-02-16	2022-05-02	3.56	4.29	3.57	3.8	0.003	0.56	0.0	0.04	12.92	0.00	2.161	13.72	0.00	5.2	94.8	0.0	-0.68	0.90	0.82	1.57	3.8	0.006	0.70	0.0	0.04	14.82	0.00	2.037	19.62	1.62	7.4	92.6	0.0	-0.87	0.39	0.90	0.83	1.09	16508	2154	5	0	0	0	0	logfile
✔	7UVV	26817	2024-02-20	2022-05-02	2.5	2.67	—	2.6	0.006	0.65	0.0	0.04	23.03	0.02	1.993	5.08	2.55	2.6	97.2	0.1	0.74	0.91	0.91	3.70	2.6	0.009	0.78	0.0	0.05	22.65	0.01	2.064	4.68	4.52	3.6	96.3	0.1	0.54	0.21	0.92	0.93	3.62	138294	5500	56	4447	3	0	0	logfile
✔	7ZQS	14874	2024-02-15	2022-05-02	2.54	3.28	2.59	3.0	0.004	0.57	0.0	0.04	18.00	0.00	2.257	5.71	0.00	2.4	97.6	0.0	1.32	0.88	0.91	5.01	3.0	0.003	0.50	0.0	0.04	18.37	0.00	2.170	5.71	0.00	2.2	97.8	0.0	1.97	0.22	0.86	0.90	4.34	11354	1278	12	60	14	0	0	logfile
✔	7UVK	26812	2024-02-14	2022-05-02	3.28	3.22	3.00	3.3	0.005	0.74	0.0	0.05	13.60	0.00	2.168	11.01	0.00	9.0	91.0	0.0	-3.16	0.57	0.78	2.35	3.2	0.006	0.74	0.0	0.05	16.43	0.00	2.066	12.42	3.75	10.4	89.6	0.0	-2.42	1.08	0.71	0.88	2.77	10350	1295	1	0	0	0	0	logfile
✔	7UVW	26818	2024-02-20	2022-05-02	2.37	2.60	—	2.5	0.005	0.65	1.0	0.04	23.09	0.02	2.091	4.76	2.30	2.6	97.2	0.1	0.61	0.91	0.91	4.09	2.5	0.007	0.73	0.0	0.04	22.80	0.01	2.089	4.49	3.32	3.5	96.3	0.1	0.52	0.87	0.92	0.93	4.01	138233	5512	54	4442	1	0	0	logfile

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