Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7ZGQ	14711	2024-02-15	2022-04-04	2.8	2.47	2.69	2.8	0.003	0.55	0.0	0.04	16.53	0.00	2.162	11.35	3.25	6.7	93.3	0.0	-1.11	0.77	0.85	3.25	2.8	0.003	0.59	0.0	0.05	16.80	0.00	2.163	12.08	4.44	7.3	92.7	0.0	-1.37	0.25	0.77	0.85	3.47	13704	1749	4	0	0	0	0	logfile
✔	7ZGR	14712	2024-02-16	2022-04-04	2.6	3.01	2.54	2.8	0.003	0.56	0.0	0.05	14.70	0.00	2.181	8.43	1.24	5.7	94.1	0.2	-0.53	0.82	0.92	4.71	2.8	0.003	0.55	0.0	0.05	15.45	0.00	2.190	8.81	2.86	5.9	93.9	0.2	-0.79	0.23	0.82	0.92	4.52	14505	1819	7	4	2	0	0	logfile
✔	7ZGo	14709	2024-02-13	2022-04-04	2.55	2.04	2.53	2.6	0.008	1.24	0.0	0.06	16.94	0.00	2.170	9.40	0.00	3.4	96.6	0.0	1.35	0.50	0.76	3.14	2.5	0.002	0.47	0.0	0.04	16.06	0.00	2.258	8.52	1.71	3.3	96.7	0.0	2.24	1.10	0.53	0.79	3.40	7754	940	6	0	21	24	0	logfile
✔	7UL6	26593	2024-02-17	2022-04-04	3.73	4.04	3.71	4.1	0.003	0.60	0.0	0.04	14.37	0.01	2.006	5.35	0.15	2.2	97.8	0.0	1.33	0.54	0.78	2.29	4.1	0.003	0.56	0.0	0.04	15.37	0.01	1.921	7.69	1.02	3.6	96.4	0.0	1.48	0.90	0.56	0.80	1.75	13268	878	2	0	0	0	6614	logfile
✔	7ZGU	14713	2024-02-23	2022-04-04	3.4	2.24	3.39	2.1	0.003	0.68	0.0	0.04	14.94	0.00	2.201	11.55	0.55	6.2	93.8	0.0	-0.91	0.69	0.68	1.58	1.6	0.003	0.71	0.0	0.04	17.43	0.00	2.124	12.67	3.05	6.3	93.7	0.0	-0.94	0.97	0.71	0.72	1.52	38940	4854	12	0	6	0	0	logfile
✔	7ZGX	14714	2024-02-18	2022-04-04	2.88	3.61	2.97	3.4	0.005	0.77	0.0	0.05	12.23	0.00	2.159	9.14	0.00	11.3	88.3	0.4	-3.11	0.71	0.86	4.42	3.4	0.003	0.59	0.0	0.04	13.58	0.00	2.196	7.43	1.74	10.0	89.9	0.1	-2.06	0.31	0.69	0.84	4.08	21351	2847	3	0	0	0	0	logfile
✔	7ZGP	14710	2024-02-16	2022-04-04	2.7	2.79	2.57	2.8	0.003	0.58	0.0	0.05	14.56	0.00	2.175	10.35	0.96	6.3	93.5	0.2	-0.84	0.79	0.91	5.10	2.8	0.004	0.58	0.0	0.05	15.61	0.00	2.117	9.92	1.86	7.2	92.8	0.0	-1.11	0.23	0.80	0.91	4.82	14055	1767	6	4	2	0	0	logfile
✔	7UL5	26592	2024-02-13	2022-04-03	3.1	3.32	3.08	3.3	0.004	0.64	0.0	0.04	11.76	0.01	2.404	3.68	0.00	3.1	96.9	0.0	-1.07	0.64	0.85	3.67	3.3	0.003	0.51	0.0	0.04	13.41	0.00	2.340	2.02	1.12	1.4	98.6	0.0	2.89	0.29	0.65	0.86	3.19	2773	371	2	0	0	0	0	logfile
✔	7ZGJ	14707	2024-02-16	2022-04-03	3.58	4.31	3.59	4.1	0.002	0.48	0.0	0.04	13.37	0.00	1.696	2.83	0.82	2.2	97.7	0.1	1.23	0.73	0.63	1.33	4.1	0.003	0.60	0.0	0.04	15.39	0.00	2.192	7.20	1.64	3.3	96.7	0.0	0.72	2.84	0.86	0.84	2.00	14314	1805	3	0	0	0	0	logfile
✔	7UL3	26590	2024-02-13	2022-04-03	3.0	3.50	2.97	3.5	0.007	0.88	2.0	0.05	11.48	0.01	2.211	5.26	0.00	2.9	97.1	0.0	1.41	0.51	0.56	1.63	3.5	0.005	0.67	0.0	0.04	13.64	0.00	2.163	5.84	3.89	3.9	96.1	0.0	0.51	0.63	0.54	0.72	2.56	5484	767	5	0	1	0	0	logfile
✔	7UL2	26589	2024-02-13	2022-04-03	2.4	2.59	2.47	2.6	0.008	1.02	0.0	0.06	12.54	0.01	2.306	6.83	0.84	1.5	98.5	0.0	1.60	0.71	0.84	4.40	2.6	0.003	0.55	0.0	0.04	13.77	0.00	2.261	2.21	2.10	0.3	99.7	0.0	2.57	1.31	0.65	0.84	2.79	2624	347	3	0	2	13	0	logfile
✘	7ZGK	14708	2024-02-15	2022-04-03	3.59	4.63	3.57	3.7	0.002	0.45	0.0	0.04	13.81	0.00	0.454	5.10	0.46	2.2	97.6	0.2	1.65	0.73	0.55	1.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13639	1723	3	0	0	0	0	logfile
✔	7XG0	33181	2024-02-17	2022-04-02	2.6	2.53	2.55	2.7	0.007	0.98	0.0	0.06	20.71	0.01	1.817	12.89	2.76	3.9	96.1	0.0	-2.06	0.76	0.82	2.99	2.7	0.003	0.63	0.0	0.04	20.34	0.00	2.051	13.69	3.52	3.6	96.4	0.0	-0.18	1.18	0.75	0.85	3.06	19893	2280	12	118	1	0	0	logfile
✔	7XG4	33185	2024-02-21	2022-04-02	3.7	3.39	3.84	3.1	0.011	1.24	0.0	0.07	20.31	0.01	1.187	37.77	1.33	3.8	96.1	0.1	-1.82	0.78	0.64	0.83	3.1	0.005	0.86	1.0	0.05	20.70	0.00	2.000	25.07	4.04	4.6	95.4	0.0	-0.62	0.60	0.79	0.66	0.72	24769	2876	13	134	1	0	0	logfile
✔	7XG2	33183	2024-02-17	2022-04-02	2.8	2.77	2.91	2.9	0.007	1.05	1.0	0.07	20.60	0.01	1.681	16.48	0.76	3.9	96.1	0.0	-2.13	0.75	0.74	2.55	2.8	0.005	0.73	0.0	0.05	20.29	0.00	2.126	18.83	3.62	3.7	96.3	0.0	-0.80	0.45	0.76	0.80	2.59	19904	2282	12	118	1	0	0	logfile
✔	7XG3	33184	2024-02-20	2022-04-02	3.0	2.77	3.04	3.0	0.007	1.12	0.0	0.07	20.21	0.01	1.641	22.81	1.26	4.1	95.9	0.0	-2.38	0.74	0.68	1.70	2.9	0.003	0.73	0.0	0.04	20.23	0.00	2.091	18.59	3.48	3.9	96.1	0.0	-0.65	0.57	0.78	0.74	1.89	24368	2839	13	128	1	0	0	logfile
✔	7ZG7	14705	2024-02-23	2022-04-02	1.77	1.79	1.79	1.8	0.004	0.74	0.0	0.04	14.44	0.01	1.952	3.06	0.00	1.8	98.2	0.0	3.49	0.77	0.86	9.05	1.8	0.004	0.69	0.0	0.04	15.33	0.00	1.997	3.32	0.37	2.4	97.6	0.0	4.81	0.71	0.79	0.88	9.05	39086	4128	72	0	382	2680	0	logfile
✔	7UKH	26581	2024-02-15	2022-04-01	2.33	2.55	2.38	2.5	0.004	0.61	0.0	0.04	17.88	0.00	2.035	7.98	1.80	2.9	97.1	0.0	0.99	0.77	0.85	3.75	2.5	0.003	0.51	0.0	0.04	18.09	0.00	2.219	6.47	1.88	2.8	97.2	0.0	1.72	0.30	0.75	0.86	3.57	12340	1536	16	0	16	0	0	logfile
✔	7UKC	26576	2024-02-13	2022-04-01	3.0	3.39	2.98	3.3	0.006	0.67	0.0	0.04	12.54	0.00	2.127	8.37	0.24	3.1	96.9	0.0	0.47	0.66	0.87	3.11	3.3	0.004	0.58	0.0	0.04	15.50	0.00	2.206	8.31	1.66	2.7	97.3	0.0	1.99	0.37	0.65	0.87	2.74	8000	1036	6	0	4	0	0	logfile
✔	7XFH	33172	2024-02-15	2022-04-01	2.9	2.66	2.93	2.9	0.006	0.77	0.0	0.05	26.28	0.01	2.285	2.77	0.00	3.4	96.6	0.0	-1.59	0.70	0.76	3.59	2.9	0.004	0.61	0.0	0.04	27.43	0.00	2.148	7.43	2.78	2.9	97.1	0.0	0.40	1.58	0.76	0.84	2.92	12969	957	11	264	0	0	0	logfile

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