Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7TKP	25977	2024-02-18	2022-01-17	4.6	7.57	4.97	4.4	0.019	2.20	0.0	0.00	6.68	0.01	2.352	0.12	0.00	4.2	94.5	1.3	-0.50	0.60	0.63	—	4.4	0.004	0.83	0.0	0.00	5.67	0.00	2.069	13.64	0.00	9.3	90.5	0.2	-0.09	0.76	0.78	0.81	—	20228	5056	27	0	0	0	0	logfile
✔	7WN0	32618	2024-02-13	2022-01-17	3.64	3.82	—	3.7	0.003	0.57	0.0	0.04	16.82	0.01	2.273	9.34	0.47	3.3	96.7	0.0	1.10	0.58	0.82	1.51	3.7	0.004	0.62	0.0	0.04	16.93	0.00	2.240	11.51	4.20	3.9	96.1	0.0	1.32	1.90	0.68	0.86	1.36	3879	494	2	0	0	0	0	logfile
✔	7TJT	25931	2024-02-18	2022-01-17	3.2	3.46	3.29	3.4	0.003	0.63	0.0	0.05	13.04	0.00	1.991	3.26	0.00	1.2	98.8	0.0	0.60	0.75	0.85	3.19	3.4	0.003	0.53	0.0	0.04	14.91	0.00	1.970	5.76	1.10	1.9	98.1	0.0	1.37	2.65	0.78	0.88	2.50	23129	3099	11	0	7	0	0	logfile
✔	7TK0	25948	2024-02-18	2022-01-17	4.4	6.63	4.39	4.1	0.019	2.21	0.0	0.00	6.55	0.01	2.394	0.08	0.00	3.9	94.5	1.5	-0.40	0.58	0.62	—	4.1	0.003	0.80	0.0	0.00	5.24	0.00	2.105	7.94	0.00	8.9	90.9	0.3	-0.45	0.81	0.83	0.81	—	20220	5054	27	0	0	0	0	logfile
✔	7TKM	25974	2024-02-18	2022-01-17	4.5	7.58	4.88	4.3	0.019	2.22	0.0	0.00	6.78	0.01	2.385	0.12	0.00	4.3	94.2	1.5	-0.44	0.59	0.59	—	4.3	0.004	0.82	0.0	0.00	5.62	0.00	2.105	12.83	0.00	9.6	90.0	0.3	-0.78	1.55	0.82	0.81	—	20227	5056	27	0	0	0	0	logfile
✔	7WN1	32619	2024-02-13	2022-01-17	3.11	3.41	—	3.3	0.007	0.65	0.0	0.04	13.83	0.00	2.246	7.77	0.00	3.7	96.3	0.0	1.00	0.64	0.87	3.64	3.3	0.003	0.55	0.0	0.04	15.99	0.00	2.143	8.41	3.02	3.7	96.3	0.0	1.84	0.89	0.65	0.89	3.19	3901	493	3	0	1	0	0	logfile
✔	7TJW	25934	2024-02-18	2022-01-17	4.0	3.71	4.05	3.8	0.003	0.64	0.0	0.05	13.06	0.00	1.855	2.42	0.00	2.2	97.8	0.0	0.19	0.61	0.79	—	3.8	0.003	0.65	0.0	0.04	16.04	0.00	1.878	9.24	3.75	3.3	96.7	0.0	0.67	0.62	0.62	0.80	—	22500	3097	12	0	10	0	0	logfile
✔	7WN3	32620	2024-02-23	2022-01-17	3.29	3.41	—	3.6	0.007	1.11	0.0	0.09	10.59	0.01	2.016	5.21	0.44	11.9	87.9	0.2	-4.63	0.75	0.66	1.28	3.3	0.005	0.98	2.0	0.05	15.07	0.00	2.012	12.74	2.54	8.1	91.9	0.0	-2.47	1.52	0.80	0.78	1.48	36584	4756	16	0	36	0	0	logfile
✔	7TJX	25939	2024-02-18	2022-01-17	4.0	3.84	4.09	3.9	0.003	0.62	0.0	0.05	12.05	0.00	1.858	2.49	0.05	1.8	98.2	0.0	0.09	0.60	0.79	—	3.9	0.003	0.66	0.0	0.04	15.74	0.00	1.899	10.37	3.59	2.6	97.4	0.0	0.37	1.47	0.62	0.80	—	21663	3072	12	0	11	0	0	logfile
✔	7TKQ	25978	2024-02-18	2022-01-17	4.5	7.57	4.53	4.3	0.019	2.21	0.0	0.00	6.72	0.01	2.371	0.08	0.00	4.0	94.5	1.5	-0.48	0.59	0.61	—	4.3	0.009	1.21	0.0	0.00	7.52	0.01	1.933	34.86	0.00	13.6	85.9	0.5	-2.21	0.83	0.82	0.83	—	20228	5056	27	0	0	0	0	logfile
✔	7WN4	32621	2024-02-17	2022-01-17	3.4	3.53	—	3.4	0.007	0.96	0.0	0.05	14.19	0.01	2.137	11.57	0.15	13.5	86.3	0.2	-3.02	0.83	0.85	2.65	3.4	0.005	0.72	0.0	0.05	15.65	0.01	2.144	9.15	2.01	10.7	89.3	0.0	-2.24	1.04	0.83	0.86	2.54	18224	2372	8	0	14	0	0	logfile
✔	7TJK	25928	2024-02-19	2022-01-16	2.7	3.10	2.76	2.9	0.005	0.89	0.0	0.05	17.38	0.01	1.886	3.81	0.39	2.9	97.1	0.0	-1.60	0.82	0.87	3.60	3.0	0.005	0.61	0.0	0.04	19.01	0.00	1.833	7.31	2.15	2.8	97.2	0.0	0.96	1.39	0.82	0.90	3.38	24668	2785	21	82	8	130	0	logfile
✔	7TJQ	25929	2024-02-21	2022-01-16	3.13	2.03	—	2.0	0.004	0.77	0.0	0.05	13.28	0.01	2.288	1.08	1.03	4.5	95.5	0.0	-0.55	0.75	0.75	3.94	2.0	0.005	0.65	0.0	0.05	15.54	0.00	2.118	8.77	2.90	2.8	97.2	0.0	-0.19	0.94	0.75	0.78	3.04	20538	2679	21	0	12	0	0	logfile
✔	7TJi	25926	2024-02-19	2022-01-16	2.7	3.10	2.66	2.9	0.005	0.90	0.0	0.05	20.30	0.01	1.974	4.53	2.52	3.0	97.0	0.0	-1.44	0.83	0.88	3.53	2.9	0.004	0.58	0.0	0.04	20.02	0.00	1.877	7.37	2.93	2.7	97.3	0.0	1.23	1.06	0.85	0.91	3.35	23766	2676	20	82	8	112	0	logfile
✔	7TJJ	25927	2024-02-19	2022-01-16	2.7	3.01	2.74	2.9	0.006	0.94	0.0	0.06	17.52	0.01	2.003	3.99	0.47	2.9	97.1	0.0	-1.54	0.82	0.88	4.00	2.9	0.008	0.69	0.0	0.05	19.14	0.00	1.739	8.08	1.95	3.2	96.8	0.0	0.77	1.09	0.83	0.91	3.72	24732	2791	22	82	8	160	0	logfile
✔	7TJF	25924	2024-02-18	2022-01-16	2.6	3.06	2.57	2.8	0.005	0.87	0.0	0.05	19.81	0.01	1.795	4.00	1.87	2.1	97.9	0.0	-1.60	0.85	0.89	3.79	2.8	0.003	0.57	0.0	0.04	19.57	0.00	1.896	6.48	1.87	2.2	97.8	0.0	1.17	1.37	0.86	0.92	3.59	21125	2327	19	82	6	297	0	logfile
✔	7TJH	25925	2024-02-19	2022-01-16	2.5	3.01	2.54	2.7	0.005	0.91	0.0	0.05	19.97	0.01	2.076	3.51	2.06	3.0	97.0	0.0	-1.38	0.83	0.89	3.79	2.8	0.003	0.58	0.0	0.04	19.42	0.00	1.910	6.58	1.66	2.8	97.2	0.0	1.26	0.65	0.84	0.91	3.47	23899	2689	22	82	8	148	0	logfile
✔	7WMM	32615	2024-02-13	2022-01-15	2.6	2.33	—	2.7	0.008	0.86	0.0	0.05	12.79	0.00	2.361	5.62	0.00	6.8	93.2	0.0	-2.83	0.51	0.88	6.56	2.7	0.004	0.79	0.0	0.05	16.37	0.00	2.249	4.69	0.38	7.1	92.9	0.0	-2.25	0.46	0.52	0.89	5.74	2618	366	8	0	2	0	0	logfile
✔	7QTT	14146	2024-02-18	2022-01-15	3.1	4.66	2.92	2.3	0.004	0.85	1.0	0.10	16.59	0.01	2.124	3.97	0.04	4.5	95.2	0.2	-2.31	0.77	0.82	2.33	2.4	0.003	0.52	0.0	0.04	16.61	0.00	1.893	8.96	0.32	4.0	95.8	0.2	1.26	0.26	0.78	0.84	2.15	73537	9759	46	343	21	0	0	logfile
✔	7QTQ	14145	2024-02-13	2022-01-15	3.3	3.53	—	3.4	0.008	0.84	4.0	0.06	15.29	0.01	2.045	9.61	0.20	10.6	89.4	0.0	-2.27	0.72	0.82	2.74	3.5	0.003	0.56	2.0	0.04	15.69	0.01	1.939	8.81	0.70	7.4	92.6	0.0	-1.02	0.39	0.71	0.84	2.30	54954	3577	8	0	24	0	26821	logfile

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