Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7QFW	13950	2024-02-14	2021-12-06	3.86	2.50	3.84	2.1	0.006	0.98	0.0	0.05	22.55	0.01	2.276	6.63	0.36	3.9	96.1	0.0	-4.68	0.71	0.67	1.40	2.1	0.004	0.70	0.0	0.04	22.83	0.00	2.172	15.49	1.43	4.3	95.7	0.0	-0.89	1.17	0.71	0.67	0.93	8765	917	4	64	0	0	0	logfile
✔	7T30	25647	2024-02-20	2021-12-06	3.0	2.23	—	2.1	0.006	1.08	0.0	0.06	17.54	0.01	2.121	11.32	6.14	8.2	91.8	0.0	-3.78	0.79	0.79	3.05	2.1	0.004	0.71	0.0	0.05	18.45	0.01	2.137	11.04	4.34	7.3	92.7	0.0	-1.20	0.93	0.80	0.82	3.01	28126	3578	18	0	24	0	0	logfile
✔	7T32	25648	2024-02-13	2021-12-06	3.4	3.96	—	3.9	0.006	0.77	0.0	0.04	14.07	0.01	2.313	6.67	0.00	5.1	94.6	0.3	1.86	0.44	0.76	0.75	3.9	0.003	0.67	0.0	0.04	16.13	0.00	2.231	8.44	3.17	4.9	94.9	0.3	2.40	0.93	0.45	0.80	0.68	2861	375	1	0	1	0	0	logfile
✔	7T2P	25621	2024-02-18	2021-12-06	3.47	3.82	3.45	3.8	0.023	1.85	3.0	0.15	13.52	0.01	1.320	1.05	0.39	3.1	95.5	1.4	-0.26	0.78	0.79	2.09	3.8	0.004	0.83	1.0	0.05	13.49	0.00	1.936	10.10	2.25	6.4	93.4	0.2	-0.75	0.82	0.79	0.82	1.90	22896	2619	54	0	162	0	0	logfile
✔	7QFQ	13947	2024-02-15	2021-12-06	3.6	3.83	3.58	4.0	0.002	0.54	0.0	0.04	12.93	0.00	2.177	8.31	0.00	5.4	94.6	0.0	-0.70	0.65	0.70	1.50	4.0	0.002	0.50	0.0	0.04	14.91	0.00	2.191	7.22	2.02	5.0	95.0	0.0	-0.54	0.36	0.66	0.71	1.58	10659	1291	1	0	0	0	0	logfile
✔	7T2R	25633	2024-02-21	2021-12-06	3.2	2.31	—	2.1	0.010	1.52	6.0	0.12	15.94	0.01	1.915	10.04	5.23	10.3	89.7	0.0	-4.57	0.76	0.76	2.17	2.1	0.005	0.77	0.0	0.05	17.15	0.01	2.050	17.61	4.18	9.3	90.7	0.0	-1.97	0.50	0.77	0.79	1.72	29216	3736	20	0	22	0	0	logfile
✔	7QFP	13946	2024-02-14	2021-12-06	3.7	4.43	3.74	4.1	0.007	1.11	4.0	0.08	15.77	0.01	2.167	19.15	4.14	12.5	86.9	0.6	-4.48	0.84	0.72	0.85	4.1	0.003	0.75	0.0	0.05	17.04	0.00	2.107	15.47	3.70	11.5	88.4	0.1	-2.94	0.77	0.85	0.76	0.45	9996	1233	1	0	0	0	0	logfile
✔	7W7W	32350	2024-02-13	2021-12-06	3.2	2.98	3.22	3.2	0.003	1.16	0.0	0.04	13.44	0.00	2.051	8.21	0.00	2.9	97.1	0.0	0.82	0.59	0.74	2.05	3.2	0.003	0.83	0.0	0.04	15.58	0.00	1.529	8.47	2.41	4.0	96.0	0.0	0.41	0.34	0.58	0.76	1.95	7870	1018	1	0	2	0	0	logfile
✔	7T2G	25612	2024-02-13	2021-12-04	2.5	1.71	—	1.4	0.007	0.88	0.0	0.05	12.03	0.01	2.214	13.39	1.00	3.5	96.5	0.0	0.61	0.80	0.81	5.15	1.4	0.003	0.57	0.0	0.04	14.59	0.00	2.145	11.70	2.00	2.1	97.9	0.0	0.68	0.37	0.80	0.81	4.59	6922	898	4	0	3	8	0	logfile
✔	7T2H	25613	2024-02-14	2021-12-04	3.2	3.41	3.23	3.4	0.004	0.53	0.0	0.04	14.19	0.00	2.158	8.69	0.65	3.6	96.4	0.0	-3.17	0.66	0.81	3.01	3.4	0.003	0.58	0.0	0.04	15.58	0.00	2.161	10.49	2.49	2.9	97.1	0.0	-0.67	0.37	0.60	0.79	2.48	8677	1119	5	0	1	0	0	logfile
✘	7W7F	32343	2024-02-15	2021-12-04	3.35	3.74	—	3.7	0.015	1.03	0.0	0.07	18.83	0.01	2.144	13.75	0.31	8.1	91.6	0.3	-1.42	0.42	0.74	1.86	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11987	1424	7	0	29	0	0	logfile
✔	7W7G	32344	2024-02-23	2021-12-04	3.2	3.34	—	3.0	0.004	0.51	0.0	0.04	11.14	0.00	2.199	8.10	3.29	3.9	96.1	0.0	2.19	0.80	0.79	1.74	3.0	0.003	0.65	0.0	0.04	14.10	0.00	2.090	12.19	2.75	3.9	96.1	0.0	1.97	1.50	0.82	0.82	1.35	38143	4758	7	0	5	0	0	logfile
✔	7W7E	32342	2024-02-14	2021-12-04	3.4	3.51	—	3.9	0.004	0.66	2.0	0.05	14.41	0.00	2.120	8.28	0.32	8.8	91.2	0.0	-1.54	0.68	0.82	2.16	3.9	0.004	0.66	0.0	0.04	16.68	0.00	2.196	9.34	3.14	6.5	93.5	0.0	-0.73	0.98	0.68	0.83	1.72	8524	1090	5	0	1	0	0	logfile
✔	7T2E	25611	2024-02-13	2021-12-03	2.7	3.14	—	3.0	0.003	0.54	0.0	0.04	16.11	0.00	2.242	1.92	1.18	0.3	99.7	0.0	0.14	0.34	0.84	5.04	3.0	0.002	0.48	0.0	0.04	16.27	0.00	2.223	2.35	2.36	0.6	99.4	0.0	0.37	0.12	0.36	0.86	4.66	2390	312	2	0	0	0	0	logfile
✔	7QEU	13941	2024-02-13	2021-12-03	2.7	3.39	—	3.0	0.007	0.80	0.0	0.04	13.54	0.00	2.135	3.49	0.00	2.6	97.4	0.0	0.76	0.78	0.87	3.01	3.0	0.002	0.54	0.0	0.04	14.86	0.00	2.195	4.16	0.93	2.0	98.0	0.0	3.41	0.42	0.79	0.88	2.64	3002	359	6	0	6	7	0	logfile
✔	7QES	13939	2024-02-13	2021-12-03	2.6	3.37	—	3.0	0.006	0.86	0.0	0.04	13.93	0.00	2.122	3.25	0.00	3.9	96.1	0.0	-0.99	0.77	0.86	3.39	3.0	0.003	0.59	0.0	0.04	15.37	0.00	2.169	4.06	1.52	3.1	96.9	0.0	2.58	1.22	0.78	0.87	2.82	3076	366	6	0	10	14	0	logfile
✔	7QEV	13942	2024-02-13	2021-12-03	2.9	3.46	—	3.1	0.009	0.86	0.0	0.05	13.68	0.00	2.164	5.92	0.00	4.3	95.7	0.0	-0.15	0.79	0.86	3.19	3.1	0.003	0.66	0.0	0.04	16.15	0.00	2.144	6.70	1.17	2.4	97.6	0.0	2.12	1.66	0.79	0.86	2.48	3204	383	6	0	8	8	0	logfile
✔	7QEY	13944	2024-02-14	2021-12-03	2.0	2.46	—	2.2	0.005	0.85	0.0	0.03	10.53	0.00	2.199	3.57	2.35	1.7	98.3	0.0	1.74	0.77	0.90	5.27	2.1	0.003	0.67	0.0	0.04	13.32	0.00	2.154	4.43	2.66	2.4	97.6	0.0	2.99	0.55	0.78	0.93	4.39	9467	1092	18	0	30	281	0	logfile
✔	7QEo	13935	2024-02-13	2021-12-03	2.9	3.47	—	3.1	0.007	0.78	0.0	0.04	13.54	0.00	2.106	5.39	0.00	3.9	96.1	0.0	0.61	0.78	0.88	3.13	3.1	0.003	0.64	0.0	0.04	15.55	0.00	2.175	6.20	1.21	2.5	97.5	0.0	2.76	1.18	0.78	0.88	2.90	3056	368	6	0	6	4	0	logfile
✔	7QER	13938	2024-02-17	2021-12-03	2.2	2.66	2.18	2.3	0.009	0.94	0.0	0.05	14.11	0.00	2.117	3.04	2.94	1.6	98.4	0.0	-0.05	0.84	0.88	3.46	2.3	0.002	0.55	0.0	0.04	14.87	0.00	2.244	2.69	2.05	1.5	98.5	0.0	3.31	1.22	0.83	0.89	3.51	19097	2244	36	0	60	305	0	logfile

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