Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7QES	13939	2024-02-13	2021-12-03	2.6	3.37	—	3.0	0.006	0.86	0.0	0.04	13.93	0.00	2.122	3.25	0.00	3.9	96.1	0.0	-0.99	0.77	0.86	3.39	3.0	0.003	0.59	0.0	0.04	15.37	0.00	2.169	4.06	1.52	3.1	96.9	0.0	2.58	1.22	0.78	0.87	2.82	3076	366	6	0	10	14	0	logfile
✔	7QEY	13944	2024-02-14	2021-12-03	2.0	2.46	—	2.2	0.005	0.85	0.0	0.03	10.53	0.00	2.199	3.57	2.35	1.7	98.3	0.0	1.74	0.77	0.90	5.27	2.1	0.003	0.67	0.0	0.04	13.32	0.00	2.154	4.43	2.66	2.4	97.6	0.0	2.99	0.55	0.78	0.93	4.39	9467	1092	18	0	30	281	0	logfile
✔	7QEQ	13937	2024-02-17	2021-12-03	1.9	2.38	1.89	2.1	0.005	0.87	0.0	0.04	12.39	0.00	2.181	2.19	1.18	1.1	98.9	0.0	1.60	0.82	0.90	4.56	2.1	0.003	0.58	0.0	0.04	14.10	0.00	2.219	2.71	1.13	1.6	98.4	0.0	3.96	0.49	0.82	0.92	4.10	19313	2268	36	0	60	305	0	logfile
✔	7QET	13940	2024-02-17	2021-12-03	2.1	2.53	2.11	2.3	0.006	0.88	0.0	0.04	13.42	0.00	2.140	1.99	2.38	2.2	97.8	0.0	1.49	0.82	0.90	3.95	2.3	0.003	0.53	0.0	0.04	14.46	0.00	2.198	3.46	2.23	1.2	98.8	0.0	3.64	0.38	0.82	0.92	3.65	19205	2256	36	0	60	305	0	logfile
✔	7W6M	32329	2024-02-21	2021-12-02	4.7	4.96	4.72	4.7	0.005	0.83	0.0	0.06	25.50	0.00	2.107	9.16	0.00	4.4	95.6	0.0	-0.63	0.85	0.80	—	4.7	0.003	0.77	0.0	0.05	14.24	0.00	2.101	10.27	0.00	4.9	95.1	0.0	-0.73	0.44	0.85	0.81	—	30756	3672	51	0	204	0	0	logfile
✔	7T22	25609	2024-02-19	2021-12-02	4.2	4.73	—	4.4	0.004	1.41	0.0	0.04	10.32	0.00	1.992	5.52	1.18	1.5	98.5	0.0	2.51	0.83	0.75	—	4.4	0.004	1.07	0.0	0.04	12.07	0.00	0.985	22.65	0.00	2.9	97.1	0.0	0.84	0.87	0.85	0.79	—	24536	3084	15	13	15	0	0	logfile
✔	7W72	32336	2024-02-17	2021-12-02	3.1	2.86	—	3.0	0.007	0.91	7.0	0.06	15.94	0.01	2.032	14.54	0.39	8.3	91.7	0.0	-1.15	0.76	0.85	3.20	3.0	0.003	0.59	0.0	0.04	16.06	0.00	2.185	9.83	2.22	6.7	93.3	0.0	-0.17	1.11	0.72	0.86	2.79	19188	2398	10	0	7	0	0	logfile
✔	7W6T	32335	2024-02-21	2021-12-02	3.85	4.45	—	3.9	0.006	0.87	0.0	0.05	14.59	0.01	2.034	32.67	0.29	10.7	89.2	0.1	-4.74	0.64	0.67	0.30	3.9	0.003	0.76	0.0	0.04	16.20	0.00	2.085	22.40	2.59	6.5	93.5	0.0	-1.53	0.71	0.63	0.65	0.35	31768	3934	10	0	0	0	0	logfile
✔	7T20	25607	2024-02-18	2021-12-02	4.7	8.85	—	7.6	0.004	0.63	0.0	0.04	12.59	0.00	2.079	7.50	3.24	2.3	97.6	0.2	0.68	0.91	0.76	—	7.4	0.003	0.60	0.0	0.04	11.88	0.00	1.850	23.27	0.04	3.4	96.5	0.1	1.26	1.62	0.93	0.82	—	21106	2661	11	10	8	0	0	logfile
✔	7W6N	32330	2024-02-17	2021-12-02	3.4	3.58	—	3.5	0.011	0.90	0.0	0.05	14.87	0.01	2.045	18.00	0.37	13.3	86.7	0.0	-4.26	0.68	0.82	2.54	3.5	0.003	0.76	0.0	0.04	16.48	0.00	2.167	11.34	2.61	5.2	94.8	0.0	-0.70	1.58	0.67	0.82	1.53	19720	2436	8	0	0	0	0	logfile
✔	7W6P	32331	2024-02-14	2021-12-02	3.47	3.79	—	9.6	0.004	0.70	0.0	0.04	13.78	0.00	2.196	14.60	0.11	7.0	93.0	0.0	-0.94	0.22	0.11	0.18	8.7	0.003	0.66	0.0	0.04	15.30	0.00	2.211	13.58	2.11	5.7	94.3	0.0	-0.69	1.89	0.31	0.25	0.29	8408	1083	5	0	1	0	0	logfile
✔	7W6S	32334	2024-02-18	2021-12-02	2.8	3.21	—	3.2	0.005	0.68	0.0	0.04	13.60	0.00	2.191	9.61	0.18	6.3	93.7	0.0	-3.03	0.69	0.83	2.38	3.2	0.003	0.78	0.0	0.04	16.32	0.00	2.200	10.90	3.08	4.4	95.6	0.0	0.83	0.68	0.67	0.82	1.55	20268	2508	8	0	0	0	0	logfile
✔	7W68	32326	2024-02-19	2021-12-01	4.4	3.35	—	2.6	0.013	1.73	35.0	0.15	17.02	0.01	1.130	27.44	2.99	15.1	82.3	2.6	-4.91	0.68	0.67	—	2.2	0.003	0.84	0.0	0.05	14.39	0.01	2.100	20.85	0.07	10.7	88.9	0.3	-2.27	1.09	0.67	0.66	—	25833	3249	6	0	0	0	0	logfile
✔	7QDY	13927	2024-02-18	2021-12-01	3.1	2.87	3.15	3.0	0.009	1.11	0.0	0.06	14.61	0.01	1.910	11.71	0.00	5.7	94.2	0.1	-1.41	0.77	0.80	2.42	3.0	0.006	0.77	0.0	0.05	16.36	0.00	1.980	8.34	2.11	9.8	90.2	0.0	-0.52	0.44	0.79	0.86	2.25	22924	2991	5	6	0	0	0	logfile
✔	7W6K	32328	2024-02-13	2021-12-01	3.5	4.56	3.58	4.1	0.007	1.13	4.0	0.07	14.61	0.01	2.337	47.37	2.01	7.1	92.9	0.0	-3.58	0.66	0.76	1.46	4.2	0.003	0.70	0.0	0.04	17.23	0.00	2.208	14.26	3.45	4.8	95.2	0.0	1.22	3.50	0.63	0.77	0.63	6468	820	2	0	0	0	0	logfile
✔	7QDZ	13928	2024-02-18	2021-12-01	3.6	3.72	3.42	3.4	0.007	0.98	0.0	0.05	14.68	0.01	1.941	17.90	0.00	5.1	94.8	0.1	-1.48	0.86	0.81	1.60	3.3	0.003	0.72	0.0	0.04	16.40	0.00	2.090	12.71	2.28	8.3	91.7	0.0	-0.25	0.97	0.86	0.81	0.99	22591	2924	5	6	0	0	0	logfile
✔	7QE5	13930	2024-02-15	2021-12-01	4.7	4.93	4.36	4.7	0.013	2.06	17.0	0.11	14.37	0.02	2.209	6.87	1.14	4.8	95.0	0.3	-2.59	0.65	0.66	—	4.8	0.003	0.64	0.0	0.04	12.94	0.01	2.016	11.33	0.00	4.5	95.4	0.1	0.60	1.14	0.64	0.68	—	11652	740	2	0	0	0	5932	logfile
✔	7T0Z	25585	2024-02-21	2021-11-30	3.0	2.77	2.88	2.9	0.006	0.74	1.0	0.05	14.33	0.01	1.966	7.00	0.00	5.2	94.8	0.0	-0.22	0.66	0.80	3.88	2.9	0.003	0.56	0.0	0.04	15.08	0.00	2.058	6.07	1.82	3.5	96.5	0.0	0.71	1.19	0.68	0.83	3.68	31129	1912	17	0	26	0	15348	logfile
✔	7T10	25586	2024-02-14	2021-11-30	2.5	2.70	—	2.8	0.005	1.00	0.0	0.06	12.36	0.01	2.235	3.61	0.73	3.0	97.0	0.0	0.62	0.64	0.83	4.77	2.8	0.002	0.56	0.0	0.04	13.76	0.00	2.258	2.32	1.10	2.3	97.7	0.0	1.67	0.91	0.64	0.83	3.71	8429	1146	9	0	0	5	0	logfile
✔	7T0W	25583	2024-02-22	2021-11-30	3.0	3.06	2.12	3.3	0.007	0.79	0.0	0.05	14.13	0.01	1.447	10.99	0.32	5.9	94.1	0.0	-1.01	0.67	0.79	3.94	3.3	0.003	0.57	0.0	0.04	14.74	0.00	1.996	8.60	0.95	4.5	95.5	0.0	-0.06	0.58	0.66	0.80	3.80	34395	2139	16	0	24	0	16968	logfile

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