Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8FLU	29287	2024-02-14	2022-12-22	2.76	3.00	2.82	3.1	0.004	0.70	0.0	0.05	13.28	0.00	2.223	12.74	0.35	3.0	96.9	0.1	0.56	0.64	0.74	3.48	3.1	0.004	0.61	0.0	0.04	16.14	0.00	2.124	12.62	2.54	2.7	97.3	0.0	1.15	0.99	0.64	0.78	2.89	8725	1141	9	0	0	5	0	logfile
✔	8FLW	29288	2024-02-16	2022-12-22	3.58	3.64	3.59	3.7	0.005	0.80	5.0	0.06	17.20	0.01	1.644	4.67	0.81	4.5	95.3	0.3	0.01	0.76	0.79	2.93	3.7	0.003	0.64	0.0	0.05	14.61	0.00	2.141	5.87	2.19	4.2	95.8	0.0	-0.47	1.27	0.78	0.81	2.85	16868	1971	37	0	102	0	0	logfile
✔	8FMA	29290	2024-02-18	2022-12-22	3.1	3.42	3.39	3.4	0.002	0.48	0.0	0.04	11.37	0.00	1.426	7.73	0.00	2.7	97.3	0.0	1.06	0.53	0.72	2.38	3.4	0.004	0.56	0.0	0.05	14.06	0.00	2.016	8.32	2.34	3.6	96.4	0.0	1.87	1.13	0.60	0.81	2.35	72974	7227	22	0	0	0	28633	logfile
✔	8FLQ	29283	2024-02-14	2022-12-22	2.55	2.78	2.65	2.8	0.003	0.57	0.0	0.04	13.87	0.00	2.209	7.54	0.21	2.1	97.9	0.0	1.35	0.64	0.70	3.93	2.9	0.007	0.66	0.0	0.05	15.98	0.00	2.119	9.35	0.64	3.2	96.8	0.0	1.12	0.35	0.64	0.83	3.42	8992	1146	9	0	0	14	0	logfile
✔	8FKS	29255	2024-02-13	2022-12-21	2.88	3.23	3.00	3.1	0.004	0.57	0.0	0.04	20.51	0.00	1.885	2.38	0.01	1.2	98.8	0.0	1.20	0.75	0.81	3.31	3.1	0.004	0.54	0.0	0.03	20.66	0.00	1.898	5.78	1.35	2.0	98.0	0.0	1.51	1.57	0.77	0.85	2.82	108693	8026	58	2046	64	0	0	logfile
✔	8FKP	29252	2024-02-22	2022-12-21	2.85	3.16	2.95	3.1	0.005	0.61	0.0	0.04	20.18	0.01	1.446	2.12	0.00	1.2	98.8	0.0	1.46	0.77	0.83	3.45	3.1	0.006	0.62	0.0	0.04	20.56	0.00	1.868	5.85	1.96	2.3	97.7	0.0	1.39	0.43	0.77	0.86	2.84	101452	7963	57	1728	57	0	0	logfile
✔	8FKW	29259	2024-02-21	2022-12-21	2.5	2.85	2.62	2.8	0.003	0.53	0.0	0.03	19.82	0.00	1.946	1.75	0.01	1.1	98.9	0.0	2.03	0.80	0.82	3.78	2.8	0.002	0.51	0.0	0.03	20.32	0.00	1.949	5.42	1.16	1.6	98.4	0.0	1.86	1.15	0.81	0.86	3.25	139783	10864	65	2499	63	0	0	logfile
✔	8FLF	29277	2024-02-19	2022-12-21	2.65	2.77	2.75	2.9	0.007	0.77	0.0	0.04	22.21	0.03	1.925	1.99	0.00	1.6	98.4	0.0	0.65	0.82	0.84	4.10	2.9	0.007	0.82	0.0	0.04	22.55	0.01	1.823	5.54	2.95	2.7	97.3	0.0	0.37	1.16	0.83	0.87	3.71	134730	7133	64	3599	93	0	0	logfile
✔	8FLB	29273	2024-02-27	2022-12-21	2.55	2.39	2.68	2.8	0.007	0.77	0.0	0.04	21.80	0.03	1.943	1.99	0.01	1.5	98.5	0.0	0.59	0.83	0.85	4.26	2.8	0.006	0.78	0.0	0.04	22.32	0.01	1.891	4.56	2.54	2.2	97.7	0.0	0.96	0.42	0.82	0.87	3.83	149034	8647	69	3695	95	0	0	logfile
✔	8FLD	29275	2024-02-27	2022-12-21	2.58	2.89	2.64	2.9	0.009	0.83	0.0	0.04	21.82	0.03	1.041	2.28	0.00	2.1	97.9	0.0	-0.07	0.86	0.86	4.32	2.9	0.004	0.70	0.0	0.03	22.11	0.01	1.053	5.54	2.01	2.1	97.9	0.0	1.04	0.45	0.86	0.88	3.66	148569	8505	68	3718	93	0	0	logfile
✘	8FLE	29276	2024-02-23	2022-12-21	2.48	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	144139	8150	66	3646	93	0	0	logfile
✔	8FL9	29271	2024-02-21	2022-12-21	2.75	2.91	2.83	3.0	0.008	0.79	0.0	0.04	22.11	0.03	1.913	2.47	0.00	1.9	98.1	0.0	0.50	0.83	0.83	3.59	3.0	0.006	0.78	0.0	0.04	22.42	0.01	1.870	7.32	2.44	2.8	97.2	0.0	0.60	0.49	0.83	0.86	3.34	139879	7690	65	3636	95	0	0	logfile
✔	8FKT	29256	2024-02-19	2022-12-21	2.81	2.81	2.95	2.9	0.004	0.59	0.0	0.04	19.92	0.00	1.945	1.91	0.02	1.3	98.7	0.0	1.55	0.74	0.81	3.63	2.9	0.003	0.51	0.0	0.03	20.23	0.00	1.980	5.46	1.26	1.9	98.1	0.0	1.70	0.40	0.76	0.86	3.13	134945	10797	65	2347	69	0	0	logfile
✔	8FL7	29269	2024-02-28	2022-12-21	2.55	2.80	2.68	2.9	0.007	0.74	0.0	0.04	21.70	0.03	1.958	2.09	0.01	1.3	98.7	0.0	0.88	0.86	0.86	4.06	2.9	0.003	0.71	1.0	0.04	22.17	0.01	1.837	5.88	1.94	1.9	98.1	0.0	1.13	0.43	0.85	0.87	3.66	149506	8711	69	3684	95	0	0	logfile
✔	8FKU	29257	2024-02-17	2022-12-21	2.82	3.05	2.91	3.0	0.006	0.64	0.0	0.04	20.35	0.01	1.935	1.98	0.01	1.6	98.4	0.0	1.03	0.75	0.83	3.77	3.0	0.003	0.53	0.0	0.04	20.58	0.00	1.967	5.17	1.38	2.1	97.9	0.0	1.54	0.39	0.77	0.87	3.11	125869	9435	62	2407	62	0	0	logfile
✔	8FL1	29264	2024-02-17	2022-12-21	3.75	3.87	3.78	3.9	0.005	0.68	0.0	0.05	16.10	0.00	2.259	3.93	0.00	2.5	97.5	0.0	0.22	0.77	0.79	2.27	3.9	0.003	0.63	0.0	0.05	14.96	0.00	2.132	6.90	2.54	3.5	96.5	0.0	-0.01	1.30	0.79	0.81	2.02	16951	1972	37	0	108	0	0	logfile
✔	8FKV	29258	2024-02-27	2022-12-21	2.47	2.71	2.57	2.7	0.003	0.53	0.0	0.03	19.43	0.00	1.957	1.78	0.00	1.1	98.9	0.0	2.08	0.80	0.83	3.64	1.6	0.004	0.55	0.0	0.04	20.03	0.00	1.928	5.05	1.50	1.8	98.2	0.0	1.79	0.42	0.82	0.87	3.30	148975	12248	71	2435	70	0	0	logfile
✔	8FLC	29274	2024-02-21	2022-12-21	2.76	2.78	2.87	2.9	0.007	0.76	0.0	0.03	22.17	0.03	1.975	2.57	0.00	1.5	98.5	0.0	0.65	0.82	0.82	3.53	2.9	0.008	0.86	0.0	0.04	22.58	0.01	1.857	7.50	2.84	3.1	96.9	0.0	0.46	1.19	0.83	0.86	3.33	139595	7626	65	3648	95	0	0	logfile
✔	8FKR	29254	2024-02-15	2022-12-21	2.89	3.25	3.05	3.1	0.003	0.55	0.0	0.04	20.11	0.00	1.940	2.04	0.01	1.2	98.8	0.0	1.71	0.75	0.81	3.01	3.1	0.005	0.59	0.0	0.04	20.45	0.00	1.929	6.20	1.55	2.2	97.8	0.0	1.36	0.44	0.77	0.86	2.88	116287	9101	63	1991	58	0	0	logfile
✔	8FL8	29270	2024-02-23	2022-12-21	4.2	4.73	3.73	4.0	0.003	0.72	0.0	0.04	14.24	0.00	1.962	16.11	0.05	5.7	94.1	0.2	-0.48	0.84	0.76	—	4.1	0.005	0.73	0.0	0.04	14.23	0.00	1.809	21.98	0.00	6.9	92.9	0.2	-0.38	1.23	0.87	0.85	—	38784	5098	32	0	10	0	0	logfile

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