Table showing results for February 2024

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8FKW	29259	2024-02-21	2022-12-21	2.5	2.85	2.62	2.8	0.003	0.53	0.0	0.03	19.82	0.00	1.946	1.75	0.01	1.1	98.9	0.0	2.03	0.80	0.82	3.78	2.8	0.002	0.51	0.0	0.03	20.32	0.00	1.949	5.42	1.16	1.6	98.4	0.0	1.86	1.15	0.81	0.86	3.25	139783	10864	65	2499	63	0	0	logfile
✔	8HTT	35017	2024-02-13	2022-12-21	3.6	4.33	3.64	4.1	0.005	0.69	0.0	0.09	19.58	0.00	2.197	27.23	0.58	6.0	94.0	0.0	1.48	0.66	0.82	2.08	4.1	0.003	0.67	0.0	0.04	15.86	0.00	2.231	8.87	2.90	6.5	93.5	0.0	1.06	2.62	0.66	0.83	1.69	3292	389	5	0	8	0	0	logfile
✔	8FLJ	29280	2024-02-13	2022-12-21	3.48	4.04	3.47	3.9	0.005	0.84	3.0	0.06	22.12	0.01	2.077	5.11	0.21	4.3	95.7	0.0	-0.29	0.77	0.71	1.07	3.8	0.003	0.60	0.0	0.04	22.22	0.00	2.018	7.36	2.37	3.5	96.4	0.0	1.50	0.83	0.80	0.78	2.30	57091	3549	14	350	0	0	25297	logfile
✔	8FLB	29273	2024-02-27	2022-12-21	2.55	2.39	2.68	2.8	0.007	0.77	0.0	0.04	21.80	0.03	1.943	1.99	0.01	1.5	98.5	0.0	0.59	0.83	0.85	4.26	2.8	0.006	0.78	0.0	0.04	22.32	0.01	1.891	4.56	2.54	2.2	97.7	0.0	0.96	0.42	0.82	0.87	3.83	149034	8647	69	3695	95	0	0	logfile
✔	8FL7	29269	2024-02-28	2022-12-21	2.55	2.80	2.68	2.9	0.007	0.74	0.0	0.04	21.70	0.03	1.958	2.09	0.01	1.3	98.7	0.0	0.88	0.86	0.86	4.06	2.9	0.003	0.71	1.0	0.04	22.17	0.01	1.837	5.88	1.94	1.9	98.1	0.0	1.13	0.43	0.85	0.87	3.66	149506	8711	69	3684	95	0	0	logfile
✔	8FL9	29271	2024-02-21	2022-12-21	2.75	2.91	2.83	3.0	0.008	0.79	0.0	0.04	22.11	0.03	1.913	2.47	0.00	1.9	98.1	0.0	0.50	0.83	0.83	3.59	3.0	0.006	0.78	0.0	0.04	22.42	0.01	1.870	7.32	2.44	2.8	97.2	0.0	0.60	0.49	0.83	0.86	3.34	139879	7690	65	3636	95	0	0	logfile
✔	8FLF	29277	2024-02-19	2022-12-21	2.65	2.77	2.75	2.9	0.007	0.77	0.0	0.04	22.21	0.03	1.925	1.99	0.00	1.6	98.4	0.0	0.65	0.82	0.84	4.10	2.9	0.007	0.82	0.0	0.04	22.55	0.01	1.823	5.54	2.95	2.7	97.3	0.0	0.37	1.16	0.83	0.87	3.71	134730	7133	64	3599	93	0	0	logfile
✔	8FL8	29270	2024-02-23	2022-12-21	4.2	4.73	3.73	4.0	0.003	0.72	0.0	0.04	14.24	0.00	1.962	16.11	0.05	5.7	94.1	0.2	-0.48	0.84	0.76	—	4.1	0.005	0.73	0.0	0.04	14.23	0.00	1.809	21.98	0.00	6.9	92.9	0.2	-0.38	1.23	0.87	0.85	—	38784	5098	32	0	10	0	0	logfile
✔	8C1P	16379	2024-02-17	2022-12-21	2.9	2.28	2.63	2.7	0.009	1.47	6.0	0.09	17.09	0.01	2.288	4.78	4.44	3.9	96.1	0.0	-1.55	0.56	0.81	4.18	2.6	0.004	0.61	0.0	0.04	16.92	0.00	2.096	6.80	2.82	2.6	97.4	0.0	0.58	0.96	0.66	0.85	3.63	17849	2300	22	0	16	64	0	logfile
✔	8FLi	29279	2024-02-18	2022-12-21	3.8	4.18	4.01	3.9	0.005	0.68	0.0	0.04	26.20	0.01	1.508	15.79	0.26	16.4	82.9	0.7	-3.70	0.81	0.83	2.14	3.9	0.003	0.61	0.0	0.03	25.60	0.00	1.868	11.60	4.59	16.0	83.1	0.9	-2.74	1.68	0.81	0.82	1.85	21511	458	3	828	3	0	0	logfile
✔	8C1V	16383	2024-02-19	2022-12-21	2.9	3.34	3.04	3.2	0.004	0.60	1.0	0.05	13.68	0.00	1.819	8.18	0.40	4.4	95.6	0.0	-0.12	0.75	0.64	1.69	3.2	0.004	0.63	0.0	0.05	15.25	0.00	2.208	9.90	2.22	4.4	95.6	0.0	-0.86	0.78	0.85	0.88	2.41	25590	3198	15	0	51	0	0	logfile
✔	8C1R	16381	2024-02-17	2022-12-21	3.2	2.92	3.03	3.1	0.011	1.15	0.0	0.07	17.11	0.01	2.068	7.15	3.23	4.7	95.2	0.1	0.17	0.61	0.84	3.26	3.1	0.006	0.63	0.0	0.04	16.11	0.00	2.195	7.26	2.30	3.8	96.2	0.0	0.85	0.91	0.71	0.89	2.66	18333	2331	19	0	20	6	0	logfile
✔	8FL0	29263	2024-02-20	2022-12-21	2.91	3.24	3.01	3.0	0.003	0.57	0.0	0.03	20.95	0.00	1.930	2.15	0.02	1.0	99.0	0.0	1.45	0.79	0.83	3.10	3.1	0.006	0.61	0.0	0.04	21.26	0.00	1.853	6.28	1.38	2.1	97.9	0.0	0.80	0.52	0.80	0.87	3.23	83377	5867	37	1679	26	0	0	logfile
✔	8FKZ	29262	2024-02-18	2022-12-21	3.04	3.41	3.18	3.1	0.003	0.54	0.0	0.03	21.45	0.00	1.941	2.23	0.00	1.0	99.0	0.0	1.48	0.75	0.83	2.81	3.1	0.007	0.68	0.0	0.04	21.59	0.01	1.861	7.32	1.83	2.8	97.1	0.0	0.76	1.15	0.76	0.87	2.61	130011	8099	63	3056	69	0	0	logfile
✔	8FK0	29247	2024-02-15	2022-12-20	4.0	4.01	3.66	3.9	0.003	0.56	0.0	0.04	11.08	0.00	2.069	9.71	0.14	2.6	97.4	0.0	0.90	0.47	0.82	—	3.9	0.003	0.57	0.0	0.04	13.37	0.00	2.051	9.29	2.70	3.2	96.8	0.0	0.66	1.16	0.47	0.83	—	12628	1848	14	0	0	0	0	logfile
✔	8FJS	29246	2024-02-18	2022-12-20	3.0	3.18	2.85	3.2	0.002	0.45	0.0	0.04	10.15	0.00	2.362	4.56	0.00	3.8	96.2	0.0	0.15	0.49	0.82	2.84	3.1	0.003	0.56	0.0	0.05	12.72	0.00	2.222	5.31	2.17	4.2	95.8	0.0	0.20	0.32	0.53	0.86	2.64	22550	3300	25	0	0	0	0	logfile
✔	8HSR	35004	2024-02-24	2022-12-20	4.0	4.38	—	3.1	0.005	0.80	0.0	0.05	15.15	0.01	1.243	24.75	0.02	6.7	93.1	0.2	-0.72	0.73	0.54	—	3.0	0.003	0.70	0.0	0.04	16.74	0.00	1.881	19.11	1.68	5.6	94.3	0.1	-0.33	0.52	0.88	0.81	—	42577	5143	21	95	21	0	0	logfile
✔	8FJP	29245	2024-02-19	2022-12-20	3.3	3.44	3.57	3.4	0.004	0.88	0.0	0.06	17.12	0.01	2.224	6.09	0.67	5.7	94.3	0.0	-1.82	0.76	0.80	2.40	3.4	0.004	0.66	0.0	0.05	18.09	0.00	2.086	11.84	5.42	6.8	93.2	0.0	-1.25	0.46	0.76	0.81	2.28	23390	2932	3	0	3	0	0	logfile
✔	8BVW	16274	2024-02-20	2022-12-20	4.0	3.84	3.33	3.4	0.006	0.90	0.0	0.05	17.06	0.01	1.730	5.60	0.06	3.1	96.9	0.0	-0.71	0.71	0.56	—	3.4	0.004	0.61	0.0	0.04	18.66	0.00	1.973	11.02	1.10	2.7	97.3	0.0	0.82	0.61	0.71	0.57	—	84783	9510	54	412	46	0	0	logfile
✔	8C1B	16377	2024-02-15	2022-12-20	3.8	4.32	3.79	3.9	0.007	1.31	2.0	0.07	16.55	0.01	2.045	3.20	0.28	4.2	95.5	0.2	-0.06	0.76	0.70	0.87	3.9	0.003	0.59	0.0	0.04	14.12	0.00	1.919	10.31	0.70	3.7	96.3	0.0	0.88	0.56	0.78	0.73	1.42	12675	807	7	0	16	0	6106	logfile

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