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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8XJM | 38401 | 2024-04-06 | 2023-12-21 | 2.85 | 3.04 | 2.79 | 3.0 | 0.003 | 0.42 | 0.0 | 0.04 | 10.25 | 0.00 | 2.256 | 4.68 | 1.05 | 1.3 | 98.7 | 0.0 | 1.55 | 0.67 | 0.82 | 4.65 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 14.72 | 0.00 | 2.198 | 7.31 | 2.43 | 1.9 | 98.1 | 0.0 | 2.00 | 1.19 | 0.68 | 0.83 | 4.09 | 8849 | 1140 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8RJL | 19251 | 2024-04-15 | 2023-12-21 | 3.34 | 3.79 | 3.44 | 3.8 | 0.012 | 1.32 | 12.0 | 0.07 | 16.84 | 0.01 | 1.607 | 10.76 | 4.59 | 12.5 | 86.4 | 1.1 | -5.23 | 0.66 | 0.76 | 1.32 | 3.8 | 0.003 | 0.79 | 0.0 | 0.04 | 17.00 | 0.00 | 2.025 | 4.52 | 2.34 | 4.4 | 95.6 | 0.0 | 0.17 | 0.64 | 0.62 | 0.73 | 0.77 | 36300 | 4575 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XJL | 38400 | 2024-04-06 | 2023-12-21 | 2.77 | 2.89 | 2.74 | 2.9 | 0.004 | 0.53 | 0.0 | 0.15 | 9.89 | 0.00 | 2.225 | 5.03 | 1.05 | 1.1 | 98.9 | 0.0 | 1.28 | 0.70 | 0.80 | 3.93 | 2.9 | 0.002 | 0.52 | 0.0 | 0.04 | 14.59 | 0.00 | 2.182 | 6.62 | 1.48 | 1.8 | 98.2 | 0.0 | 1.86 | 0.58 | 0.68 | 0.80 | 3.12 | 8846 | 1140 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XJ4 | 38393 | 2024-04-05 | 2023-12-20 | 3.19 | 3.42 | 3.49 | 3.7 | 0.005 | 0.80 | 0.0 | 0.05 | 19.96 | 0.02 | 2.221 | 6.60 | 1.57 | 2.8 | 97.2 | 0.0 | 1.21 | 0.73 | 0.81 | 3.19 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 17.63 | 0.01 | 2.278 | 5.47 | 1.26 | 3.8 | 96.2 | 0.0 | 1.68 | 1.19 | 0.69 | 0.79 | 2.39 | 5820 | 693 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 8VE0 | 43160 | 2024-04-05 | 2023-12-18 | 3.1 | 2.92 | 2.99 | 3.1 | 0.006 | 0.62 | 0.0 | 0.05 | 13.41 | 0.00 | 2.234 | 5.96 | 0.57 | 0.2 | 99.8 | 0.0 | 1.74 | 0.73 | 0.79 | 4.26 | 3.1 | 0.002 | 0.54 | 0.0 | 0.05 | 14.87 | 0.00 | 2.195 | 7.99 | 1.71 | 1.5 | 98.5 | 0.0 | 1.32 | 0.36 | 0.74 | 0.81 | 3.46 | 3527 | 466 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 8Ri9 | 19184 | 2024-04-05 | 2023-12-18 | 3.3 | 3.49 | 2.64 | 3.5 | 0.011 | 1.88 | 0.0 | 0.08 | 12.25 | 0.01 | 2.613 | 3.55 | 2.38 | 3.6 | 96.4 | 0.0 | -1.61 | 0.44 | 0.71 | 6.15 | 3.7 | 0.002 | 0.48 | 0.0 | 0.05 | 11.26 | 0.00 | 2.207 | 4.50 | 1.90 | 11.3 | 88.7 | 0.0 | -1.22 | 0.62 | 0.29 | 0.63 | 5.87 | 4230 | 295 | 5 | 0 | 0 | 0 | 2180 | logfile |
✔ | 8RHN | 19177 | 2024-04-16 | 2023-12-15 | 4.5 | 4.44 | 4.58 | 4.1 | 0.006 | 0.80 | 2.0 | 0.05 | 14.00 | 0.01 | 1.290 | 11.68 | 0.00 | 12.9 | 87.0 | 0.1 | -4.53 | 0.80 | 0.73 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 14.12 | 0.00 | 2.034 | 4.83 | 0.00 | 7.4 | 92.6 | 0.0 | -0.39 | 1.25 | 0.80 | 0.72 | — | 38368 | 4976 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XGR | 38330 | 2024-04-07 | 2023-12-15 | 3.2 | 3.95 | 3.21 | 3.7 | 0.003 | 0.56 | 0.0 | 0.04 | 13.83 | 0.00 | 2.126 | 7.33 | 0.22 | 3.7 | 96.3 | 0.0 | -2.13 | 0.69 | 0.74 | 2.11 | 3.8 | 0.004 | 0.78 | 0.0 | 0.05 | 16.33 | 0.00 | 2.167 | 16.00 | 4.12 | 4.6 | 95.4 | 0.0 | -0.84 | 3.07 | 0.68 | 0.79 | 1.00 | 8206 | 1049 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XGC | 38317 | 2024-04-12 | 2023-12-15 | 3.7 | 3.66 | — | 3.7 | 0.004 | 0.93 | 2.0 | 0.05 | 15.91 | 0.01 | 2.237 | 5.24 | 0.02 | 2.9 | 97.1 | 0.0 | -1.60 | 0.75 | 0.76 | 1.46 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 17.23 | 0.00 | 2.072 | 10.80 | 1.89 | 2.9 | 97.1 | 0.0 | 0.67 | 1.57 | 0.76 | 0.78 | 1.36 | 82765 | 10319 | 36 | 90 | 12 | 0 | 0 | logfile |
✔ | 8VDE | 43147 | 2024-04-10 | 2023-12-14 | 3.4 | 3.79 | 3.62 | 3.7 | 0.006 | 0.86 | 0.0 | 0.05 | 13.48 | 0.01 | 2.235 | 1.81 | 0.09 | 3.4 | 96.6 | 0.0 | -1.45 | 0.59 | 0.79 | 2.60 | 3.7 | 0.005 | 0.66 | 0.0 | 0.04 | 16.66 | 0.00 | 2.122 | 9.67 | 2.20 | 3.5 | 96.5 | 0.0 | 0.70 | 0.89 | 0.61 | 0.85 | 1.94 | 70177 | 8643 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 8VC2 | 43130 | 2024-04-07 | 2023-12-13 | 3.98 | 4.39 | 3.99 | 4.4 | 0.006 | 0.84 | 0.0 | 0.04 | 14.09 | 0.01 | 2.353 | 2.91 | 0.31 | 2.4 | 97.6 | 0.0 | -0.98 | 0.57 | 0.71 | 1.08 | 4.4 | 0.004 | 0.96 | 1.0 | 0.04 | 16.35 | 0.01 | 2.236 | 10.63 | 4.64 | 2.7 | 97.3 | 0.0 | 1.52 | 2.23 | 0.56 | 0.73 | 1.08 | 11796 | 1516 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RGH | 19133 | 2024-04-07 | 2023-12-13 | 3.9 | 4.34 | 3.89 | 4.0 | 0.012 | 1.88 | 4.0 | 0.10 | 14.04 | 0.02 | 2.504 | 0.53 | 0.00 | 4.7 | 95.3 | 0.0 | -1.05 | 0.82 | 0.66 | 1.27 | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 15.90 | 0.00 | 2.129 | 12.82 | 1.05 | 3.4 | 96.6 | 0.0 | 0.82 | 1.22 | 0.84 | 0.69 | 1.02 | 9682 | 1287 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8VC1 | 43129 | 2024-04-08 | 2023-12-13 | 2.85 | 3.23 | 2.92 | 3.2 | 0.012 | 1.46 | 0.0 | 0.06 | 17.03 | 0.01 | 2.196 | 4.03 | 0.30 | 2.1 | 97.9 | 0.0 | -1.02 | 0.59 | 0.82 | 3.63 | 3.2 | 0.003 | 0.51 | 0.0 | 0.03 | 16.24 | 0.00 | 2.232 | 8.98 | 1.34 | 1.4 | 98.6 | 0.0 | 4.06 | 0.45 | 0.56 | 0.80 | 2.26 | 13128 | 1564 | 8 | 0 | 32 | 0 | 0 | logfile |
✔ | 8RGG | 19132 | 2024-04-06 | 2023-12-13 | 4.0 | 4.37 | 3.92 | 4.0 | 0.012 | 1.85 | 5.0 | 0.10 | 13.18 | 0.01 | 2.531 | 0.14 | 0.00 | 4.1 | 95.9 | 0.0 | -0.27 | 0.70 | 0.46 | — | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.49 | 0.00 | 2.134 | 16.50 | 3.42 | 7.0 | 93.0 | 0.0 | 0.34 | 2.93 | 0.75 | 0.59 | — | 7679 | 1156 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 8RF0 | 19114 | 2024-04-11 | 2023-12-12 | 3.4 | 4.01 | 3.68 | 3.9 | 0.004 | 0.73 | 1.0 | 0.05 | 16.92 | 0.01 | 2.171 | 10.52 | 0.45 | 8.8 | 90.3 | 0.9 | -1.04 | 0.70 | 0.59 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21922 | 2780 | 4 | 0 | 19 | 0 | 0 | logfile |
✔ | 8RFH | 19121 | 2024-04-07 | 2023-12-12 | 3.9 | 4.24 | 3.78 | 4.1 | 0.003 | 0.76 | 1.0 | 0.05 | 15.84 | 0.00 | 2.201 | 17.02 | 1.44 | 2.7 | 97.2 | 0.1 | 0.66 | 0.81 | 0.74 | 0.73 | 4.0 | 0.003 | 0.77 | 0.0 | 0.05 | 16.04 | 0.00 | 2.201 | 17.23 | 2.13 | 3.3 | 96.7 | 0.0 | 0.36 | 1.00 | 0.82 | 0.76 | 0.99 | 11802 | 1460 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8RF9 | 19116 | 2024-04-10 | 2023-12-12 | 3.28 | 3.88 | 3.54 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 14.24 | 0.00 | 2.070 | 10.54 | 0.14 | 9.5 | 89.4 | 1.1 | -0.95 | 0.76 | 0.84 | 2.02 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 15.51 | 0.00 | 2.015 | 10.22 | 0.90 | 8.9 | 90.3 | 0.8 | -0.52 | 1.33 | 0.73 | 0.83 | 1.83 | 20646 | 2642 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8RFE | 19118 | 2024-04-11 | 2023-12-12 | 3.8 | 4.63 | 3.96 | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 16.60 | 0.00 | 2.148 | 11.81 | 0.14 | 7.6 | 91.6 | 0.8 | -0.82 | 0.84 | 0.80 | 0.80 | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 14.44 | 0.00 | 2.035 | 16.23 | 0.68 | 8.7 | 90.6 | 0.7 | -0.54 | 0.40 | 0.85 | 0.84 | 0.97 | 21776 | 2765 | 3 | 0 | 12 | 0 | 0 | logfile |
✔ | 8XEJ | 38291 | 2024-04-06 | 2023-12-12 | 3.66 | 3.95 | 3.64 | 3.9 | 0.004 | 0.84 | 0.0 | 0.04 | 13.95 | 0.00 | 2.222 | 7.98 | 3.64 | 4.9 | 95.1 | 0.0 | 0.15 | 0.66 | 0.77 | 1.42 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 16.16 | 0.00 | 2.182 | 7.42 | 4.81 | 4.1 | 95.9 | 0.0 | 1.07 | 2.84 | 0.70 | 0.81 | 1.85 | 7153 | 916 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8RFG | 19119 | 2024-04-11 | 2023-12-12 | 3.35 | 3.85 | 3.48 | 3.7 | 0.004 | 0.76 | 0.0 | 0.04 | 19.69 | 0.00 | 2.000 | 10.70 | 0.14 | 8.9 | 90.3 | 0.8 | -1.57 | 0.82 | 0.82 | 2.28 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 15.08 | 0.00 | 2.108 | 10.24 | 1.09 | 7.7 | 91.6 | 0.7 | -0.70 | 0.41 | 0.79 | 0.81 | 1.85 | 21879 | 2765 | 5 | 0 | 27 | 2 | 0 | logfile |